RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 OMA1Q96E52 524 aa16.22■□□□□ 0.19
HDDC3-201ENST00000330334 METTL2AQ96IZ6 378 aaKnown RBP16.22■□□□□ 0.19
HDDC3-201ENST00000330334 PRDM14Q9GZV8 571 aa16.22■□□□□ 0.19
HDDC3-201ENST00000330334 STMN4Q9H169 189 aaPredicted RBP16.22■□□□□ 0.19
HDDC3-201ENST00000330334 METTL7AQ9H8H3 244 aa16.22■□□□□ 0.19
HDDC3-201ENST00000330334 MID1IP1Q9NPA3 183 aa16.22■□□□□ 0.19
HDDC3-201ENST00000330334 GIMAP4Q9NUV9 329 aa16.22■□□□□ 0.19
HDDC3-201ENST00000330334 C15orf38-AP3S2A0A0A6YYH1 394 aa16.21■□□□□ 0.19
HDDC3-201ENST00000330334 PLIN3O60664 434 aa16.21■□□□□ 0.19
HDDC3-201ENST00000330334 ICOSLGO75144 302 aa16.21■□□□□ 0.19
HDDC3-201ENST00000330334 SLITRK5O94991 958 aa16.21■□□□□ 0.19
HDDC3-201ENST00000330334 ANXA4P09525 319 aaPredicted RBP16.21■□□□□ 0.19
HDDC3-201ENST00000330334 DDCP20711 480 aa16.21■□□□□ 0.19
HDDC3-201ENST00000330334 TIMP3P35625 211 aa16.21■□□□□ 0.19
HDDC3-201ENST00000330334 NAGLUP54802 743 aa16.21■□□□□ 0.19
HDDC3-201ENST00000330334 MRPS35P82673 323 aaKnown RBP16.21■□□□□ 0.19
HDDC3-201ENST00000330334 PLCXD2Q0VAA5 305 aa16.21■□□□□ 0.19
HDDC3-201ENST00000330334 FAM180BQ6P0A1 224 aa16.21■□□□□ 0.19
HDDC3-201ENST00000330334 FRMD7Q6ZUT3 714 aa16.21■□□□□ 0.19
HDDC3-201ENST00000330334 SEM1Q6ZVN7 128 aa16.21■□□□□ 0.19
HDDC3-201ENST00000330334 LIX1LQ8IVB5 337 aa16.21■□□□□ 0.19
HDDC3-201ENST00000330334 CCNYL1Q8N7R7 359 aa16.21■□□□□ 0.19
HDDC3-201ENST00000330334 TMCO6Q96DC7 493 aa16.21■□□□□ 0.19
HDDC3-201ENST00000330334 TRIM44Q96DX7 344 aaPredicted RBP16.21■□□□□ 0.19
HDDC3-201ENST00000330334 SLC35A4Q96G79 324 aa16.21■□□□□ 0.19
HDDC3-201ENST00000330334 KCNA7Q96RP8 456 aa16.21■□□□□ 0.19
HDDC3-201ENST00000330334 EXO1Q9UQ84 846 aaKnown RBP16.21■□□□□ 0.19
HDDC3-201ENST00000330334 HCFC1P51610 2035 aa16.21■□□□□ 0.18
HDDC3-201ENST00000330334 SNPHO15079 494 aa16.2■□□□□ 0.18
HDDC3-201ENST00000330334 UGT2B11O75310 529 aa16.2■□□□□ 0.18
HDDC3-201ENST00000330334 CBR3O75828 277 aa16.2■□□□□ 0.18
HDDC3-201ENST00000330334 ACTL6AO96019 429 aa16.2■□□□□ 0.18
HDDC3-201ENST00000330334 SHBGP04278 402 aa16.2■□□□□ 0.18
HDDC3-201ENST00000330334 CT45A8P0DMV1 189 aa16.2■□□□□ 0.18
HDDC3-201ENST00000330334 CT45A9P0DMV2 189 aa16.2■□□□□ 0.18
HDDC3-201ENST00000330334 CEACAM8P31997 349 aaPredicted RBP16.2■□□□□ 0.18
HDDC3-201ENST00000330334 PEX19P40855 299 aa16.2■□□□□ 0.18
HDDC3-201ENST00000330334 PTGDSP41222 190 aa16.2■□□□□ 0.18
HDDC3-201ENST00000330334 FOXA1P55317 472 aa16.2■□□□□ 0.18
HDDC3-201ENST00000330334 KRTAP10-9P60411 292 aa16.2■□□□□ 0.18
HDDC3-201ENST00000330334 ZNF763Q0D2J5 394 aa16.2■□□□□ 0.18
HDDC3-201ENST00000330334 NNATQ16517 81 aa16.2■□□□□ 0.18
HDDC3-201ENST00000330334 ERCC6LQ2NKX8 1250 aa16.2■□□□□ 0.18
HDDC3-201ENST00000330334 ACSF3Q4G176 576 aaPredicted RBP16.2■□□□□ 0.18
HDDC3-201ENST00000330334 CT45A2Q5DJT8 189 aa16.2■□□□□ 0.18
HDDC3-201ENST00000330334 LACC1Q8IV20 430 aa16.2■□□□□ 0.18
HDDC3-201ENST00000330334 HOMEZQ8IX15 550 aa16.2■□□□□ 0.18
HDDC3-201ENST00000330334 OR9A2Q8NGT5 310 aa16.2■□□□□ 0.18
HDDC3-201ENST00000330334 EXOSC8Q96B26 276 aaKnown RBP16.2■□□□□ 0.18
HDDC3-201ENST00000330334 VSTM2LQ96N03 204 aa16.2■□□□□ 0.18
HDDC3-201ENST00000330334 COL21A1Q96P44 957 aa16.2■□□□□ 0.18
HDDC3-201ENST00000330334 NODALQ96S42 347 aa16.2■□□□□ 0.18
HDDC3-201ENST00000330334 OSBPL11Q9BXB4 747 aa16.2■□□□□ 0.18
HDDC3-201ENST00000330334 L2HGDHQ9H9P8 463 aa16.2■□□□□ 0.18
HDDC3-201ENST00000330334 PFDN4Q9NQP4 134 aa16.2■□□□□ 0.18
HDDC3-201ENST00000330334 OXSMQ9NWU1 459 aa16.2■□□□□ 0.18
HDDC3-201ENST00000330334 ZNF629Q9UEG4 869 aaPredicted RBP16.2■□□□□ 0.18
HDDC3-201ENST00000330334 MYO1GB0I1T2 1018 aa16.19■□□□□ 0.18
HDDC3-201ENST00000330334 NPIPB8E9PQR5 432 aa16.19■□□□□ 0.18
HDDC3-201ENST00000330334 SYT5O00445 386 aa16.19■□□□□ 0.18
HDDC3-201ENST00000330334 RSL1D1O76021 490 aaKnown RBP16.19■□□□□ 0.18
HDDC3-201ENST00000330334 CPA3P15088 417 aa16.19■□□□□ 0.18
HDDC3-201ENST00000330334 BMP7P18075 431 aa16.19■□□□□ 0.18
HDDC3-201ENST00000330334 CFAP157Q5JU67 520 aa16.19■□□□□ 0.18
HDDC3-201ENST00000330334 SPDYAQ5MJ70 313 aa16.19■□□□□ 0.18
HDDC3-201ENST00000330334 CES4AQ5XG92 561 aa16.19■□□□□ 0.18
HDDC3-201ENST00000330334 NSUN5P2Q63ZY6 315 aa16.19■□□□□ 0.18
HDDC3-201ENST00000330334 ANGPTL8Q6UXH0 198 aa16.19■□□□□ 0.18
HDDC3-201ENST00000330334 GSPT2Q8IYD1 628 aaKnown RBP16.19■□□□□ 0.18
HDDC3-201ENST00000330334 WDSUB1Q8N9V3 476 aa16.19■□□□□ 0.18
HDDC3-201ENST00000330334 LRRN4CLQ8ND94 238 aa16.19■□□□□ 0.18
HDDC3-201ENST00000330334 RNF138Q8WVD3 245 aa16.19■□□□□ 0.18
HDDC3-201ENST00000330334 UBLCP1Q8WVY7 318 aaPredicted RBP16.19■□□□□ 0.18
HDDC3-201ENST00000330334 ABTB1Q969K4 478 aaPredicted RBP16.19■□□□□ 0.18
HDDC3-201ENST00000330334 TMBIM1Q969X1 311 aa16.19■□□□□ 0.18
HDDC3-201ENST00000330334 UGT2B28Q9BY64 529 aa16.19■□□□□ 0.18
HDDC3-201ENST00000330334 TAS2R9Q9NYW1 312 aa16.19■□□□□ 0.18
HDDC3-201ENST00000330334 MRPS18CQ9Y3D5 142 aaKnown RBP16.19■□□□□ 0.18
HDDC3-201ENST00000330334 NCKAP5O14513 1909 aa16.19■□□□□ 0.18
HDDC3-201ENST00000330334 SPG11Q96JI7 2443 aa16.18■□□□□ 0.18
HDDC3-201ENST00000330334 CELSR1Q9NYQ6 3014 aa16.18■□□□□ 0.18
HDDC3-201ENST00000330334 A0A087WV62 115 aa16.18■□□□□ 0.18
HDDC3-201ENST00000330334 PRAMEF25A6NGN4 478 aa16.18■□□□□ 0.18
HDDC3-201ENST00000330334 CD8B2A6NJW9 211 aa16.18■□□□□ 0.18
HDDC3-201ENST00000330334 PLOD2O00469 737 aa16.18■□□□□ 0.18
HDDC3-201ENST00000330334 GNB5O14775 395 aa16.18■□□□□ 0.18
HDDC3-201ENST00000330334 TSPAN2O60636 221 aa16.18■□□□□ 0.18
HDDC3-201ENST00000330334 ERN1O75460 977 aaKnown RBP16.18■□□□□ 0.18
HDDC3-201ENST00000330334 UROSP10746 265 aa16.18■□□□□ 0.18
HDDC3-201ENST00000330334 PRPH2P23942 346 aa16.18■□□□□ 0.18
HDDC3-201ENST00000330334 SLC18A2Q05940 514 aa16.18■□□□□ 0.18
HDDC3-201ENST00000330334 BTKQ06187 659 aa16.18■□□□□ 0.18
HDDC3-201ENST00000330334 C2orf80Q0P641 193 aa16.18■□□□□ 0.18
HDDC3-201ENST00000330334 EFR3AQ14156 821 aa16.18■□□□□ 0.18
HDDC3-201ENST00000330334 IMPG1Q17R60 797 aa16.18■□□□□ 0.18
HDDC3-201ENST00000330334 EIPR1Q53HC9 387 aa16.18■□□□□ 0.18
HDDC3-201ENST00000330334 DESI1Q6ICB0 168 aa16.18■□□□□ 0.18
HDDC3-201ENST00000330334 FAM71E1Q6IPT2 247 aa16.18■□□□□ 0.18
HDDC3-201ENST00000330334 SCIMPQ6UWF3 145 aa16.18■□□□□ 0.18
HDDC3-201ENST00000330334 RNF165Q6ZSG1 346 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms