RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 ABHD12BQ7Z5M8 362 aaPredicted RBP11.52□□□□□ -0.57
PCF11-201ENST00000298281 TSSK6Q9BXA6 273 aa11.52□□□□□ -0.57
PCF11-201ENST00000298281 NEURL4Q96JN8 1562 aa11.52□□□□□ -0.57
PCF11-201ENST00000298281 CEBPZOSA8MTT3 80 aa11.52□□□□□ -0.57
PCF11-201ENST00000298281 A8MV72 311 aaPredicted RBP11.52□□□□□ -0.57
PCF11-201ENST00000298281 MANBAO00462 879 aa11.52□□□□□ -0.57
PCF11-201ENST00000298281 GBAP04062 536 aa11.52□□□□□ -0.57
PCF11-201ENST00000298281 ALDOAP04075 364 aaKnown RBP11.52□□□□□ -0.57
PCF11-201ENST00000298281 GABRR1P24046 479 aa11.52□□□□□ -0.57
PCF11-201ENST00000298281 OXTRP30559 389 aa11.52□□□□□ -0.57
PCF11-201ENST00000298281 NCBP2-AS2Q69YL0 99 aa11.52□□□□□ -0.57
PCF11-201ENST00000298281 RNF175Q8N4F7 328 aa11.52□□□□□ -0.57
PCF11-201ENST00000298281 OR4K14Q8NGD5 310 aa11.52□□□□□ -0.57
PCF11-201ENST00000298281 ST6GALNAC5Q9BVH7 336 aa11.52□□□□□ -0.57
PCF11-201ENST00000298281 BTBD2Q9BX70 525 aa11.52□□□□□ -0.57
PCF11-201ENST00000298281 PCDHAC1Q9H158 963 aa11.52□□□□□ -0.57
PCF11-201ENST00000298281 TSPAN10Q9H1Z9 355 aaPredicted RBP11.52□□□□□ -0.57
PCF11-201ENST00000298281 HRASLSQ9HDD0 168 aa11.52□□□□□ -0.57
PCF11-201ENST00000298281 MYOCOSA0A1B0GUC4 107 aa11.52□□□□□ -0.57
PCF11-201ENST00000298281 AOC2O75106 756 aa11.52□□□□□ -0.57
PCF11-201ENST00000298281 CHRNA1P02708 482 aa11.52□□□□□ -0.57
PCF11-201ENST00000298281 MT-ND2P03891 347 aa11.52□□□□□ -0.57
PCF11-201ENST00000298281 GRPRP30550 384 aa11.52□□□□□ -0.57
PCF11-201ENST00000298281 GSK3BP49841 420 aa11.52□□□□□ -0.57
PCF11-201ENST00000298281 ZSWIM9Q86XI8 627 aa11.52□□□□□ -0.57
PCF11-201ENST00000298281 ZNF454Q8N9F8 522 aa11.52□□□□□ -0.57
PCF11-201ENST00000298281 CDK15Q96Q40 435 aa11.52□□□□□ -0.57
PCF11-201ENST00000298281 SECISBP2Q96T21 854 aaKnown RBP11.52□□□□□ -0.57
PCF11-201ENST00000298281 C12orf65Q9H3J6 166 aaKnown RBP11.52□□□□□ -0.57
PCF11-201ENST00000298281 AMBNQ9NP70 447 aa11.52□□□□□ -0.57
PCF11-201ENST00000298281 DZANK1Q9NVP4 752 aa11.52□□□□□ -0.57
PCF11-201ENST00000298281 LIPT1Q9Y234 373 aa11.52□□□□□ -0.57
PCF11-201ENST00000298281 ADGRB2O60241 1585 aa11.52□□□□□ -0.57
PCF11-201ENST00000298281 TLX2O43763 284 aaPredicted RBP11.52□□□□□ -0.57
PCF11-201ENST00000298281 DUX1O43812 170 aa11.52□□□□□ -0.57
PCF11-201ENST00000298281 XPNPEP2O43895 674 aa11.52□□□□□ -0.57
PCF11-201ENST00000298281 ONECUT3O60422 494 aaPredicted RBP11.52□□□□□ -0.57
PCF11-201ENST00000298281 DNAJB5O75953 348 aa11.52□□□□□ -0.57
PCF11-201ENST00000298281 TOXO94900 526 aa11.52□□□□□ -0.57
PCF11-201ENST00000298281 KCNE1P15382 129 aa11.52□□□□□ -0.57
PCF11-201ENST00000298281 AGTR1P30556 359 aa11.52□□□□□ -0.57
PCF11-201ENST00000298281 ATP4BP51164 291 aa11.52□□□□□ -0.57
PCF11-201ENST00000298281 SLC35A2P78381 396 aa11.52□□□□□ -0.57
PCF11-201ENST00000298281 TRIM61Q5EBN2 209 aa11.52□□□□□ -0.57
PCF11-201ENST00000298281 NAPRTQ6XQN6 538 aa11.52□□□□□ -0.57
PCF11-201ENST00000298281 SNAPC3Q92966 411 aa11.52□□□□□ -0.57
PCF11-201ENST00000298281 RBM24Q9BX46 236 aaKnown RBP11.52□□□□□ -0.57
PCF11-201ENST00000298281 ADAM19Q9H013 955 aa11.52□□□□□ -0.57
PCF11-201ENST00000298281 IL21RQ9HBE5 538 aa11.52□□□□□ -0.57
PCF11-201ENST00000298281 SLC7A8Q9UHI5 535 aa11.52□□□□□ -0.57
PCF11-201ENST00000298281 TMEM184BQ9Y519 407 aaPredicted RBP11.52□□□□□ -0.57
PCF11-201ENST00000298281 MROH2AA6NES4 1674 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 NOTOA8MTQ0 251 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 RNGTTO60942 597 aaKnown RBP11.51□□□□□ -0.57
PCF11-201ENST00000298281 KNG1P01042 644 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 POLR2CP19387 275 aaPredicted RBP11.51□□□□□ -0.57
PCF11-201ENST00000298281 RAB6AP20340 208 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 G0S2P27469 103 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 CD97P48960 835 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 AFF3P51826 1226 aaKnown RBP11.51□□□□□ -0.57
PCF11-201ENST00000298281 PTCHD3Q3KNS1 767 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 FAM111BQ6SJ93 734 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 TSGA13Q96PP4 275 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 TRIB3Q96RU7 358 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 PIP5K1AQ99755 562 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 XPNPEP1Q9NQW7 623 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 KCNK5O95279 499 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 VEGFCP49767 419 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 LPAL2Q16609 132 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 SLC36A3Q495N2 470 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 DMBX1Q8NFW5 382 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 ADIPOR1Q96A54 375 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 DDIT4LQ96D03 193 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 PIGVQ9NUD9 493 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 GPR34Q9UPC5 381 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 HTR3BO95264 441 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 CBX7O95931 251 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 GDF10P55107 478 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 ELOCQ15369 112 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 PDLIM3Q53GG5 364 aaPredicted RBP11.51□□□□□ -0.57
PCF11-201ENST00000298281 LIPJQ5W064 366 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 HEPHL1Q6MZM0 1159 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 OR4F6Q8NGB9 312 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 PTCHD1Q96NR3 888 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 CDC6Q99741 560 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 RPS10P5Q9NQ39 176 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 TLR9Q9NR96 1032 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 HSPB11Q9Y547 144 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 ZNF487B1APH4 448 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 TMEM63AO94886 807 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 OR10J4P0C629 311 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 PPP5CP53041 499 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 DNAJB13P59910 316 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 IRF9Q00978 393 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 TMEM53Q6P2H8 277 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 TIFABQ6ZNK6 161 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 Q6ZVU0 165 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 GOLGA7Q7Z5G4 137 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 CILP2Q8IUL8 1156 aa11.51□□□□□ -0.57
PCF11-201ENST00000298281 DIO2Q92813 273 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms