RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 RNF6Q9Y252 685 aa11.66□□□□□ -0.54
NPLOC4-213ENST00000573519 CELSR2Q9HCU4 2923 aa11.66□□□□□ -0.54
NPLOC4-213ENST00000573519 DIDO1Q9BTC0 2240 aaKnown RBP11.66□□□□□ -0.54
NPLOC4-213ENST00000573519 TEX15Q9BXT5 2789 aa11.65□□□□□ -0.54
NPLOC4-213ENST00000573519 C15orf38-AP3S2A0A0A6YYH1 394 aa11.65□□□□□ -0.54
NPLOC4-213ENST00000573519 NKX2-6A6NCS4 301 aa11.65□□□□□ -0.54
NPLOC4-213ENST00000573519 HCN1O60741 890 aa11.65□□□□□ -0.54
NPLOC4-213ENST00000573519 TRIM3O75382 744 aaPredicted RBP11.65□□□□□ -0.54
NPLOC4-213ENST00000573519 CBX7O95931 251 aa11.65□□□□□ -0.54
NPLOC4-213ENST00000573519 DRD2P14416 443 aa11.65□□□□□ -0.54
NPLOC4-213ENST00000573519 CHRNB4P30926 498 aa11.65□□□□□ -0.54
NPLOC4-213ENST00000573519 PTGER4P35408 488 aa11.65□□□□□ -0.54
NPLOC4-213ENST00000573519 KIR3DL1P43629 444 aa11.65□□□□□ -0.54
NPLOC4-213ENST00000573519 NAA20P61599 178 aa11.65□□□□□ -0.54
NPLOC4-213ENST00000573519 C2orf80Q0P641 193 aa11.65□□□□□ -0.54
NPLOC4-213ENST00000573519 PLCXD2Q0VAA5 305 aa11.65□□□□□ -0.54
NPLOC4-213ENST00000573519 DUSP8Q13202 625 aa11.65□□□□□ -0.54
NPLOC4-213ENST00000573519 PCLAFQ15004 111 aa11.65□□□□□ -0.54
NPLOC4-213ENST00000573519 LIPMQ5VYY2 423 aa11.65□□□□□ -0.54
NPLOC4-213ENST00000573519 B3GNT6Q6ZMB0 384 aa11.65□□□□□ -0.54
NPLOC4-213ENST00000573519 PACS2Q86VP3 889 aa11.65□□□□□ -0.54
NPLOC4-213ENST00000573519 MREGQ8N565 214 aa11.65□□□□□ -0.54
NPLOC4-213ENST00000573519 C17orf47Q8NEP4 570 aa11.65□□□□□ -0.54
NPLOC4-213ENST00000573519 OR9A2Q8NGT5 310 aa11.65□□□□□ -0.54
NPLOC4-213ENST00000573519 RDH11Q8TC12 318 aa11.65□□□□□ -0.54
NPLOC4-213ENST00000573519 KAT2AQ92830 837 aa11.65□□□□□ -0.54
NPLOC4-213ENST00000573519 OMA1Q96E52 524 aa11.65□□□□□ -0.54
NPLOC4-213ENST00000573519 LCORQ96JN0 433 aaPredicted RBP11.65□□□□□ -0.54
NPLOC4-213ENST00000573519 ZNF681Q96N22 645 aa11.65□□□□□ -0.54
NPLOC4-213ENST00000573519 FAM111AQ96PZ2 611 aa11.65□□□□□ -0.54
NPLOC4-213ENST00000573519 MECRQ9BV79 373 aa11.65□□□□□ -0.54
NPLOC4-213ENST00000573519 GATA5Q9BWX5 397 aaPredicted RBP11.65□□□□□ -0.54
NPLOC4-213ENST00000573519 IQCGQ9H095 443 aaKnown RBP11.65□□□□□ -0.54
NPLOC4-213ENST00000573519 ANKRA2Q9H9E1 313 aa11.65□□□□□ -0.54
NPLOC4-213ENST00000573519 SPRR3Q9UBC9 169 aa11.65□□□□□ -0.54
NPLOC4-213ENST00000573519 PRODH2Q9UF12 536 aa11.65□□□□□ -0.54
NPLOC4-213ENST00000573519 ZNF639Q9UID6 485 aa11.65□□□□□ -0.54
NPLOC4-213ENST00000573519 RAB21Q9UL25 225 aa11.65□□□□□ -0.54
NPLOC4-213ENST00000573519 FIS1Q9Y3D6 152 aa11.65□□□□□ -0.54
NPLOC4-213ENST00000573519 POLR3HQ9Y535 204 aaPredicted RBP11.65□□□□□ -0.54
NPLOC4-213ENST00000573519 CRYBG3Q68DQ2 2970 aa11.65□□□□□ -0.54
NPLOC4-213ENST00000573519 MYO7BQ6PIF6 2116 aa11.65□□□□□ -0.55
NPLOC4-213ENST00000573519 ANKRD33BA6NCL7 494 aa11.64□□□□□ -0.55
NPLOC4-213ENST00000573519 H3BQF6 201 aa11.64□□□□□ -0.55
NPLOC4-213ENST00000573519 GNB5O14775 395 aa11.64□□□□□ -0.55
NPLOC4-213ENST00000573519 WDR1O75083 606 aa11.64□□□□□ -0.55
NPLOC4-213ENST00000573519 PPM1BO75688 479 aa11.64□□□□□ -0.55
NPLOC4-213ENST00000573519 SNX4O95219 450 aa11.64□□□□□ -0.55
NPLOC4-213ENST00000573519 ABCB1P08183 1280 aaPredicted RBP11.64□□□□□ -0.55
NPLOC4-213ENST00000573519 ENDOUP21128 410 aaKnown RBP11.64□□□□□ -0.55
NPLOC4-213ENST00000573519 ALDH3A1P30838 453 aa11.64□□□□□ -0.55
NPLOC4-213ENST00000573519 CASP3P42574 277 aa11.64□□□□□ -0.55
NPLOC4-213ENST00000573519 ZNF844Q08AG5 666 aa11.64□□□□□ -0.55
NPLOC4-213ENST00000573519 ZNF763Q0D2J5 394 aa11.64□□□□□ -0.55
NPLOC4-213ENST00000573519 KRT71Q3SY84 523 aa11.64□□□□□ -0.55
NPLOC4-213ENST00000573519 ZNF628Q5EBL2 1059 aa11.64□□□□□ -0.55
NPLOC4-213ENST00000573519 C1orf185Q5T7R7 199 aa11.64□□□□□ -0.55
NPLOC4-213ENST00000573519 CLEC6AQ6EIG7 209 aa11.64□□□□□ -0.55
NPLOC4-213ENST00000573519 DESI1Q6ICB0 168 aa11.64□□□□□ -0.55
NPLOC4-213ENST00000573519 LURAP1LQ8IV03 231 aa11.64□□□□□ -0.55
NPLOC4-213ENST00000573519 SAMD14Q8IZD0 417 aaPredicted RBP11.64□□□□□ -0.55
NPLOC4-213ENST00000573519 FAM9CQ8IZT9 166 aa11.64□□□□□ -0.55
NPLOC4-213ENST00000573519 NEIL3Q8TAT5 605 aa11.64□□□□□ -0.55
NPLOC4-213ENST00000573519 TCP10LQ8TDR4 215 aa11.64□□□□□ -0.55
NPLOC4-213ENST00000573519 CTHRC1Q96CG8 243 aa11.64□□□□□ -0.55
NPLOC4-213ENST00000573519 HSPBAP1Q96EW2 488 aa11.64□□□□□ -0.55
NPLOC4-213ENST00000573519 GNRHR2Q96P88 292 aa11.64□□□□□ -0.55
NPLOC4-213ENST00000573519 BBS4Q96RK4 519 aa11.64□□□□□ -0.55
NPLOC4-213ENST00000573519 SECISBP2Q96T21 854 aaKnown RBP11.64□□□□□ -0.55
NPLOC4-213ENST00000573519 TTYH2Q9BSA4 534 aa11.64□□□□□ -0.55
NPLOC4-213ENST00000573519 TMEM109Q9BVC6 243 aa11.64□□□□□ -0.55
NPLOC4-213ENST00000573519 ANGPTL4Q9BY76 406 aa11.64□□□□□ -0.55
NPLOC4-213ENST00000573519 UCK2Q9BZX2 261 aa11.64□□□□□ -0.55
NPLOC4-213ENST00000573519 KCNJ16Q9NPI9 418 aa11.64□□□□□ -0.55
NPLOC4-213ENST00000573519 MIEF1Q9NQG6 463 aa11.64□□□□□ -0.55
NPLOC4-213ENST00000573519 RRAGDQ9NQL2 400 aaPredicted RBP11.64□□□□□ -0.55
NPLOC4-213ENST00000573519 SLC35C2Q9NQQ7 365 aa11.64□□□□□ -0.55
NPLOC4-213ENST00000573519 MKS1Q9NXB0 559 aa11.64□□□□□ -0.55
NPLOC4-213ENST00000573519 QPCTLQ9NXS2 382 aa11.64□□□□□ -0.55
NPLOC4-213ENST00000573519 KLRF1Q9NZS2 232 aa11.64□□□□□ -0.55
NPLOC4-213ENST00000573519 MID2Q9UJV3 735 aa11.64□□□□□ -0.55
NPLOC4-213ENST00000573519 FAM215AQ9Y5M1 114 aa11.64□□□□□ -0.55
NPLOC4-213ENST00000573519 SERTM1A2A2V5 107 aa11.63□□□□□ -0.55
NPLOC4-213ENST00000573519 C2orf72A6NCS6 295 aa11.63□□□□□ -0.55
NPLOC4-213ENST00000573519 ACOX3O15254 700 aa11.63□□□□□ -0.55
NPLOC4-213ENST00000573519 TRIM13O60858 407 aa11.63□□□□□ -0.55
NPLOC4-213ENST00000573519 NME6O75414 186 aaPredicted RBP11.63□□□□□ -0.55
NPLOC4-213ENST00000573519 BCAS2O75934 225 aaPredicted RBP11.63□□□□□ -0.55
NPLOC4-213ENST00000573519 GLI4P10075 376 aa11.63□□□□□ -0.55
NPLOC4-213ENST00000573519 UROSP10746 265 aa11.63□□□□□ -0.55
NPLOC4-213ENST00000573519 DDCP20711 480 aa11.63□□□□□ -0.55
NPLOC4-213ENST00000573519 MPIP34949 423 aa11.63□□□□□ -0.55
NPLOC4-213ENST00000573519 SOX18P35713 384 aa11.63□□□□□ -0.55
NPLOC4-213ENST00000573519 PPICP45877 212 aa11.63□□□□□ -0.55
NPLOC4-213ENST00000573519 GSTM5P46439 218 aa11.63□□□□□ -0.55
NPLOC4-213ENST00000573519 EMDP50402 254 aa11.63□□□□□ -0.55
NPLOC4-213ENST00000573519 DCAF7P61962 342 aa11.63□□□□□ -0.55
NPLOC4-213ENST00000573519 GALNT18Q6P9A2 607 aa11.63□□□□□ -0.55
NPLOC4-213ENST00000573519 ANGPTL8Q6UXH0 198 aa11.63□□□□□ -0.55
NPLOC4-213ENST00000573519 MEX3BQ6ZN04 569 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms