RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 ERI3O43414 337 aaKnown RBP5.4□□□□□ -1.54
SCAF11-213ENST00000550629 GALR3O60755 368 aaPredicted RBP5.4□□□□□ -1.54
SCAF11-213ENST00000550629 SHOX2O60902 331 aaPredicted RBP5.4□□□□□ -1.54
SCAF11-213ENST00000550629 GUCY1B2O75343 617 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 MYO1DO94832 1006 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 TNFSF15O95150 251 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 NSA2O95478 260 aaKnown RBP5.4□□□□□ -1.54
SCAF11-213ENST00000550629 SERPIND1P05546 499 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 CYC1P08574 325 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 VIMP08670 466 aaKnown RBP5.4□□□□□ -1.54
SCAF11-213ENST00000550629 LINC00032P0C843 101 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 PRR35P0CG20 571 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 SMIM10L1P0DMW3 83 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 HIST1H1TP22492 207 aaPredicted RBP5.4□□□□□ -1.54
SCAF11-213ENST00000550629 SERPINB3P29508 390 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 RORAP35398 523 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 BSGP35613 385 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 SSR2P43308 183 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 HTR6P50406 440 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 RAP1GDS1P52306 607 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 MTTPP55157 894 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 RPS13P62277 151 aaKnown RBP5.4□□□□□ -1.54
SCAF11-213ENST00000550629 TRA2BP62995 288 aaKnown RBP5.4□□□□□ -1.54
SCAF11-213ENST00000550629 CYP4F2P78329 520 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 SHC2P98077 582 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 EMX2Q04743 252 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 BTKQ06187 659 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 ACSM2AQ08AH3 577 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 TBL3Q12788 808 aaKnown RBP5.4□□□□□ -1.54
SCAF11-213ENST00000550629 FOXI1Q12951 378 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 MAD2L1Q13257 205 aaPredicted RBP5.4□□□□□ -1.54
SCAF11-213ENST00000550629 IL10RAQ13651 578 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 ODF1Q14990 250 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 IMPG1Q17R60 797 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 AP5B1Q2VPB7 878 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 DEFB110Q30KQ9 67 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 C3orf36Q3SXR2 165 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 ATP6AP1LQ52LC2 224 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 TOR1AIP1Q5JTV8 583 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 TCHHL1Q5QJ38 904 aaPredicted RBP5.4□□□□□ -1.54
SCAF11-213ENST00000550629 METTL21CQ5VZV1 264 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 ACSM2BQ68CK6 577 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 OR4C11Q6IEV9 310 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 ADNP2Q6IQ32 1131 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 EPGNQ6UW88 154 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 ZNF517Q6ZMY9 492 aaPredicted RBP5.4□□□□□ -1.54
SCAF11-213ENST00000550629 FAM47EQ6ZV65 393 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 IKBIPQ70UQ0 350 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 DGLUCYQ7Z3D6 616 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 COMMD6Q7Z4G1 85 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 SPATA19Q7Z5L4 167 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 NUDT13Q86X67 352 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 ZFAND4Q86XD8 727 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 DDIASQ8IXT1 998 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 METTL4Q8N3J2 472 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 TBC1D15Q8TC07 691 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 AGR3Q8TD06 166 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 ACTRT2Q8TDY3 377 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 UTP15Q8TED0 518 aaKnown RBP5.4□□□□□ -1.54
SCAF11-213ENST00000550629 FKBP10Q96AY3 582 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 PRR11Q96HE9 360 aaPredicted RBP5.4□□□□□ -1.54
SCAF11-213ENST00000550629 SMIM10Q96HG1 83 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 BOD1Q96IK1 185 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 MAELQ96JY0 434 aaKnown RBP5.4□□□□□ -1.54
SCAF11-213ENST00000550629 FCRL1Q96LA6 429 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 C10orf90Q96M02 699 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 GBP5Q96PP8 586 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 F2RL3Q96RI0 385 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 SERINC2Q96SA4 455 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 ULBP3Q9BZM4 244 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 SPRY4Q9C004 299 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 NSRP1Q9H0G5 558 aaKnown RBP5.4□□□□□ -1.54
SCAF11-213ENST00000550629 OR51B5Q9H339 312 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 WDR54Q9H977 334 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 COPS7BQ9H9Q2 264 aaPredicted RBP5.4□□□□□ -1.54
SCAF11-213ENST00000550629 LRTM1Q9HBL6 345 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 LYRM4Q9HD34 91 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 THSD1Q9NS62 852 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 TXLNGQ9NUQ3 528 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 FGFR1OP2Q9NVK5 253 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 PNPOQ9NVS9 261 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 TMEM45AQ9NWC5 275 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 C1orf109Q9NX04 203 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 LYARQ9NX58 379 aaKnown RBP5.4□□□□□ -1.54
SCAF11-213ENST00000550629 MS4A12Q9NXJ0 267 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 ASIC5Q9NY37 505 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 DKK4Q9UBT3 224 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 PHF11Q9UIL8 331 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 KCNE5Q9UJ90 142 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 ADAM21Q9UKJ8 722 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 SLC12A4Q9UP95 1085 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 RP1P56715 2156 aa5.4□□□□□ -1.55
SCAF11-213ENST00000550629 PCNX2A6NKB5 2137 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 IGLV3-12A0A075B6K2 115 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 A0A0A6YYD5 115 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 ARHGAP10A1A4S6 786 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 FAM149AA5PLN7 773 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 CCDC154A6NI56 674 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 C21orf140B9A014 251 aa5.39□□□□□ -1.55
SCAF11-213ENST00000550629 STMND1H3BQB6 276 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms