RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 ANKHQ9HCJ1 492 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 SEMA4BQ9NPR2 832 aaPredicted RBP5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 PLSCR4Q9NRQ2 329 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 LRFN1Q9P244 771 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 AASSQ9UDR5 926 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 ZNF282Q9UDV7 671 aaPredicted RBP5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 TUBD1Q9UJT1 453 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 PADI2Q9Y2J8 665 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 RNF11Q9Y3C5 154 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 SEC16AO15027 2179 aa5.9□□□□□ -1.46
ATPAF1-209ENST00000529214 MDC1Q14676 2089 aaKnown RBP5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 A0A087X0M5 115 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 A0A1B0GTL3 188 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 A0A1B0GX30 115 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 SGK494L7N484 410 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 EIF4EBP3O60516 100 aaPredicted RBP5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 CIDEAO60543 219 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 GALR3O60755 368 aaPredicted RBP5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 DNAJB6O75190 326 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 SPAG7O75391 227 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 DNAJB5O75953 348 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 BMP10O95393 424 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 OTCP00480 354 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 PLATP00750 562 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 TGFB1P01137 390 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 UMODP07911 640 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 ZGLP1P0C6A0 271 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 ZNF888P0CJ79 500 aaPredicted RBP5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 MYL2P10916 166 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 IL1RNP18510 177 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 TSPAN8P19075 237 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 FBLP22087 321 aaKnown RBP5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 SERPINB1P30740 379 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 CPA2P48052 419 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 ALDH9A1P49189 494 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 ALDH3A2P51648 485 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 CCNG1P51959 295 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 NAGLUP54802 743 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 FOXL2P58012 376 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 RAB8AP61006 207 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 NAA20P61599 178 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 STXBP1P61764 594 aaKnown RBP5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 EEF1A1P68104 462 aaKnown RBP5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 MAT1AQ00266 395 aaKnown RBP5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 OCA2Q04671 838 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 EEF1A2Q05639 463 aaKnown RBP5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 ACTN3Q08043 901 aaPredicted RBP5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 SCRN3Q0VDG4 424 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 TRAF3Q13114 568 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 CPSF6Q16630 551 aaKnown RBP eCLIP5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 UGT8Q16880 541 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 SYT16Q17RD7 645 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 GGTA1PQ4G0N0 100 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 DEFB134Q4QY38 66 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 VWA2Q5GFL6 755 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 TOR1AIP1Q5JTV8 583 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 C1orf185Q5T7R7 199 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 EEF1A1P5Q5VTE0 462 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 ADNP2Q6IQ32 1131 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 CHSY3Q70JA7 882 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 ABHD13Q7L211 337 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 ADCK1Q86TW2 530 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 SLC38A6Q8IZM9 456 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 SHISA5Q8N114 240 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 OR8H3Q8N146 312 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 ATG16L2Q8NAA4 619 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 OR2L5Q8NG80 312 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 OR4F6Q8NGB9 312 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 OR51Q1Q8NH59 317 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 ZCCHC10Q8TBK6 192 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 TCP10LQ8TDR4 215 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 ADAMTS17Q8TE56 1095 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 PPP4R1Q8TF05 950 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 THAP4Q8WY91 577 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 ZNF566Q969W8 418 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 MS4A6EQ96DS6 147 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 C19orf60Q96EN9 201 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 APIPQ96GX9 242 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 APOPT1Q96IL0 206 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 ANKRD27Q96NW4 1050 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 DHRS9Q9BPW9 319 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 SORBS1Q9BX66 1292 aaKnown RBP5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 BTBD2Q9BX70 525 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 MS4A8Q9BY19 250 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 REXO4Q9GZR2 422 aaKnown RBP5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 SOX17Q9H6I2 414 aaPredicted RBP5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 MKKSQ9NPJ1 570 aaPredicted RBP5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 PRDM7Q9NQW5 492 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 ACSS2Q9NR19 701 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 ARMC1Q9NVT9 282 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 SLC17A7Q9P2U7 560 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 TRPC4Q9UBN4 977 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 CTSFQ9UBX1 484 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 ATP6V1HQ9UI12 483 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 ZNF225Q9UK10 706 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 NXT1Q9UKK6 140 aaKnown RBP5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 PSME2Q9UL46 239 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 PTRH2Q9Y3E5 179 aaKnown RBP5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 NAALAD2Q9Y3Q0 740 aa5.9□□□□□ -1.47
ATPAF1-209ENST00000529214 ACTL7BQ9Y614 415 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms