RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	CCNYL3	P0C7X3	344 aa		10.12	□□□□□ -0.79
SPIDR-222	ENST00000524006	CHRNB1	P11230	501 aa		10.12	□□□□□ -0.79
SPIDR-222	ENST00000524006	POR	P16435	677 aa	Predicted RBP	10.12	□□□□□ -0.79
SPIDR-222	ENST00000524006	TYRP1	P17643	537 aa		10.12	□□□□□ -0.79
SPIDR-222	ENST00000524006	NT5E	P21589	574 aa		10.12	□□□□□ -0.79
SPIDR-222	ENST00000524006	CD27	P26842	260 aa		10.12	□□□□□ -0.79
SPIDR-222	ENST00000524006	CD38	P28907	300 aa		10.12	□□□□□ -0.79
SPIDR-222	ENST00000524006	SLC5A2	P31639	672 aa		10.12	□□□□□ -0.79
SPIDR-222	ENST00000524006	PTGER1	P34995	402 aa		10.12	□□□□□ -0.79
SPIDR-222	ENST00000524006	POLR2I	P36954	125 aa	Known RBP	10.12	□□□□□ -0.79
SPIDR-222	ENST00000524006	MLLT3	P42568	568 aa	Predicted RBP	10.12	□□□□□ -0.79
SPIDR-222	ENST00000524006	CTSK	P43235	329 aa		10.12	□□□□□ -0.79
SPIDR-222	ENST00000524006	ST13	P50502	369 aa	Known RBP	10.12	□□□□□ -0.79
SPIDR-222	ENST00000524006	LIM2	P55344	173 aa		10.12	□□□□□ -0.79
SPIDR-222	ENST00000524006	RGS8	P57771	180 aa	Predicted RBP	10.12	□□□□□ -0.79
SPIDR-222	ENST00000524006	VSX2	P58304	361 aa	Predicted RBP	10.12	□□□□□ -0.79
SPIDR-222	ENST00000524006	SIM1	P81133	766 aa	Predicted RBP	10.12	□□□□□ -0.79
SPIDR-222	ENST00000524006	SHC2	P98077	582 aa		10.12	□□□□□ -0.79
SPIDR-222	ENST00000524006	TEK	Q02763	1124 aa		10.12	□□□□□ -0.79
SPIDR-222	ENST00000524006	ZNF155	Q12901	538 aa	Predicted RBP	10.12	□□□□□ -0.79
SPIDR-222	ENST00000524006	C1orf61	Q13536	156 aa		10.12	□□□□□ -0.79
SPIDR-222	ENST00000524006	LARS2	Q15031	903 aa	Known RBP	10.12	□□□□□ -0.79
SPIDR-222	ENST00000524006	ZNF311	Q5JNZ3	666 aa		10.12	□□□□□ -0.79
SPIDR-222	ENST00000524006	FCRL6	Q6DN72	434 aa		10.12	□□□□□ -0.79
SPIDR-222	ENST00000524006	CASP12	Q6UXS9	341 aa		10.12	□□□□□ -0.79
SPIDR-222	ENST00000524006	PLEKHM3	Q6ZWE6	761 aa		10.12	□□□□□ -0.79
SPIDR-222	ENST00000524006	PEX5L	Q8IYB4	626 aa		10.12	□□□□□ -0.79
SPIDR-222	ENST00000524006	PARP8	Q8N3A8	854 aa		10.12	□□□□□ -0.79
SPIDR-222	ENST00000524006	STX19	Q8N4C7	294 aa		10.12	□□□□□ -0.79
SPIDR-222	ENST00000524006	C19orf47	Q8N9M1	422 aa	Known RBP	10.12	□□□□□ -0.79
SPIDR-222	ENST00000524006	LMX1A	Q8TE12	382 aa		10.12	□□□□□ -0.79
SPIDR-222	ENST00000524006	ADAMTS18	Q8TE60	1221 aa		10.12	□□□□□ -0.79
SPIDR-222	ENST00000524006	FBLIM1	Q8WUP2	373 aa		10.12	□□□□□ -0.79
SPIDR-222	ENST00000524006	SLC9A6	Q92581	669 aa		10.12	□□□□□ -0.79
SPIDR-222	ENST00000524006	UCN3	Q969E3	161 aa		10.12	□□□□□ -0.79
SPIDR-222	ENST00000524006	MUL1	Q969V5	352 aa		10.12	□□□□□ -0.79
SPIDR-222	ENST00000524006	FKBP10	Q96AY3	582 aa		10.12	□□□□□ -0.79
SPIDR-222	ENST00000524006	ELP4	Q96EB1	424 aa		10.12	□□□□□ -0.79
SPIDR-222	ENST00000524006	PRRC1	Q96M27	445 aa		10.12	□□□□□ -0.79
SPIDR-222	ENST00000524006	FCRL4	Q96PJ5	515 aa		10.12	□□□□□ -0.79
SPIDR-222	ENST00000524006	TRNT1	Q96Q11	434 aa	Known RBP	10.12	□□□□□ -0.79
SPIDR-222	ENST00000524006	OR2A5	Q96R48	311 aa		10.12	□□□□□ -0.79
SPIDR-222	ENST00000524006	SLC38A3	Q99624	504 aa		10.12	□□□□□ -0.79
SPIDR-222	ENST00000524006	SH3GL3	Q99963	347 aa		10.12	□□□□□ -0.79
SPIDR-222	ENST00000524006	COPS4	Q9BT78	406 aa		10.12	□□□□□ -0.79
SPIDR-222	ENST00000524006	TCEAL2	Q9H3H9	227 aa	Predicted RBP	10.12	□□□□□ -0.79
SPIDR-222	ENST00000524006	SERHL2	Q9H4I8	314 aa		10.12	□□□□□ -0.79
SPIDR-222	ENST00000524006	ARMC7	Q9H6L4	198 aa		10.12	□□□□□ -0.79
SPIDR-222	ENST00000524006	LTB4R2	Q9NPC1	389 aa		10.12	□□□□□ -0.79
SPIDR-222	ENST00000524006	ACER3	Q9NUN7	267 aa		10.12	□□□□□ -0.79
SPIDR-222	ENST00000524006	SOHLH2	Q9NX45	425 aa		10.12	□□□□□ -0.79
SPIDR-222	ENST00000524006	ERVK-18	Q9QC07	812 aa		10.12	□□□□□ -0.79
SPIDR-222	ENST00000524006	WNT16	Q9UBV4	365 aa		10.12	□□□□□ -0.79
SPIDR-222	ENST00000524006	POMT2	Q9UKY4	750 aa		10.12	□□□□□ -0.79
SPIDR-222	ENST00000524006	CDC14A	Q9UNH5	594 aa		10.12	□□□□□ -0.79
SPIDR-222	ENST00000524006	ZNF232	Q9UNY5	417 aa		10.12	□□□□□ -0.79
SPIDR-222	ENST00000524006	IGHV1OR15-9	A0A0B4J2B8	117 aa		10.11	□□□□□ -0.79
SPIDR-222	ENST00000524006		H3BMQ9	156 aa		10.11	□□□□□ -0.79
SPIDR-222	ENST00000524006		M0R3H8	397 aa		10.11	□□□□□ -0.79
SPIDR-222	ENST00000524006	SYT5	O00445	386 aa		10.11	□□□□□ -0.79
SPIDR-222	ENST00000524006	PCDH17	O14917	1159 aa		10.11	□□□□□ -0.79
SPIDR-222	ENST00000524006	CTSV	O60911	334 aa		10.11	□□□□□ -0.79
SPIDR-222	ENST00000524006	COQ9	O75208	318 aa		10.11	□□□□□ -0.79
SPIDR-222	ENST00000524006	SEC14L2	O76054	403 aa		10.11	□□□□□ -0.79
SPIDR-222	ENST00000524006	MT-ND2	P03891	347 aa		10.11	□□□□□ -0.79
SPIDR-222	ENST00000524006	CHRM4	P08173	479 aa		10.11	□□□□□ -0.79
SPIDR-222	ENST00000524006	CPM	P14384	443 aa		10.11	□□□□□ -0.79
SPIDR-222	ENST00000524006	POU2F1	P14859	743 aa		10.11	□□□□□ -0.79
SPIDR-222	ENST00000524006	GSTM3	P21266	225 aa		10.11	□□□□□ -0.79
SPIDR-222	ENST00000524006	CBL	P22681	906 aa		10.11	□□□□□ -0.79
SPIDR-222	ENST00000524006	ELAVL4	P26378	380 aa	Known RBP	10.11	□□□□□ -0.79
SPIDR-222	ENST00000524006	ALDH4A1	P30038	563 aa		10.11	□□□□□ -0.79
SPIDR-222	ENST00000524006	SERPINB10	P48595	397 aa		10.11	□□□□□ -0.79
SPIDR-222	ENST00000524006	C21orf59	P57076	290 aa		10.11	□□□□□ -0.79
SPIDR-222	ENST00000524006	RAB38	P57729	211 aa		10.11	□□□□□ -0.79
SPIDR-222	ENST00000524006	OLR1	P78380	273 aa		10.11	□□□□□ -0.79
SPIDR-222	ENST00000524006	RPL6	Q02878	288 aa	Known RBP	10.11	□□□□□ -0.79
SPIDR-222	ENST00000524006	ZNHIT3	Q15649	155 aa	Predicted RBP	10.11	□□□□□ -0.79
SPIDR-222	ENST00000524006	LTB4R	Q15722	352 aa		10.11	□□□□□ -0.79
SPIDR-222	ENST00000524006	NPTX1	Q15818	432 aa		10.11	□□□□□ -0.79
SPIDR-222	ENST00000524006	DUSP7	Q16829	419 aa		10.11	□□□□□ -0.79
SPIDR-222	ENST00000524006	ZNF750	Q32MQ0	723 aa		10.11	□□□□□ -0.79
SPIDR-222	ENST00000524006	CDC73	Q6P1J9	531 aa		10.11	□□□□□ -0.79
SPIDR-222	ENST00000524006	PTCHD4	Q6ZW05	846 aa		10.11	□□□□□ -0.79
SPIDR-222	ENST00000524006	ZNF761	Q86XN6	746 aa	Predicted RBP	10.11	□□□□□ -0.79
SPIDR-222	ENST00000524006	RLN3	Q8WXF3	142 aa		10.11	□□□□□ -0.79
SPIDR-222	ENST00000524006	TANK	Q92844	425 aa		10.11	□□□□□ -0.79
SPIDR-222	ENST00000524006	SLC38A4	Q969I6	547 aa		10.11	□□□□□ -0.79
SPIDR-222	ENST00000524006	TM4SF19	Q96DZ7	209 aa		10.11	□□□□□ -0.79
SPIDR-222	ENST00000524006		Q96MT0	163 aa		10.11	□□□□□ -0.79
SPIDR-222	ENST00000524006	COG8	Q96MW5	612 aa		10.11	□□□□□ -0.79
SPIDR-222	ENST00000524006	BCL7B	Q9BQE9	202 aa		10.11	□□□□□ -0.79
SPIDR-222	ENST00000524006	LRRC61	Q9BV99	259 aa		10.11	□□□□□ -0.79
SPIDR-222	ENST00000524006	LHPP	Q9H008	270 aa		10.11	□□□□□ -0.79
SPIDR-222	ENST00000524006	POLR2J3	Q9H1A7	115 aa	Known RBP	10.11	□□□□□ -0.79
SPIDR-222	ENST00000524006	GIN1	Q9NXP7	522 aa		10.11	□□□□□ -0.79
SPIDR-222	ENST00000524006	KCND3	Q9UK17	655 aa		10.11	□□□□□ -0.79
SPIDR-222	ENST00000524006	DAPP1	Q9UN19	280 aa		10.11	□□□□□ -0.79
SPIDR-222	ENST00000524006	RNF6	Q9Y252	685 aa		10.11	□□□□□ -0.79
SPIDR-222	ENST00000524006	IFT52	Q9Y366	437 aa		10.11	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms