RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 TESCQ96BS2 214 aa13.86□□□□□ -0.19
RNF4-210ENST00000508235 SNRNP40Q96DI7 357 aaKnown RBP13.86□□□□□ -0.19
RNF4-210ENST00000508235 LCORQ96JN0 433 aaPredicted RBP13.86□□□□□ -0.19
RNF4-210ENST00000508235 ZBTB18Q99592 522 aa13.86□□□□□ -0.19
RNF4-210ENST00000508235 SIKE1Q9BRV8 207 aa13.86□□□□□ -0.19
RNF4-210ENST00000508235 DUSP26Q9BV47 211 aa13.86□□□□□ -0.19
RNF4-210ENST00000508235 ITPAQ9BY32 194 aa13.86□□□□□ -0.19
RNF4-210ENST00000508235 C3orf14Q9HBI5 128 aa13.86□□□□□ -0.19
RNF4-210ENST00000508235 NEUROD4Q9HD90 331 aa13.86□□□□□ -0.19
RNF4-210ENST00000508235 KLHL1Q9NR64 748 aa13.86□□□□□ -0.19
RNF4-210ENST00000508235 FRG2CA6NGY1 282 aa13.85□□□□□ -0.19
RNF4-210ENST00000508235 TTC36A6NLP5 189 aa13.85□□□□□ -0.19
RNF4-210ENST00000508235 UPK1AO00322 258 aa13.85□□□□□ -0.19
RNF4-210ENST00000508235 TP53I11O14683 189 aa13.85□□□□□ -0.19
RNF4-210ENST00000508235 UBDO15205 165 aa13.85□□□□□ -0.19
RNF4-210ENST00000508235 POLR3GO15318 223 aaPredicted RBP13.85□□□□□ -0.19
RNF4-210ENST00000508235 ERN1O75460 977 aaKnown RBP13.85□□□□□ -0.19
RNF4-210ENST00000508235 FBXO45P0C2W1 286 aa13.85□□□□□ -0.19
RNF4-210ENST00000508235 NAGAP17050 411 aa13.85□□□□□ -0.19
RNF4-210ENST00000508235 KIR3DL1P43629 444 aa13.85□□□□□ -0.19
RNF4-210ENST00000508235 ST13P50502 369 aaKnown RBP13.85□□□□□ -0.19
RNF4-210ENST00000508235 RPP38P78345 283 aaKnown RBP13.85□□□□□ -0.19
RNF4-210ENST00000508235 PRR5P85299 388 aa13.85□□□□□ -0.19
RNF4-210ENST00000508235 DUSP8Q13202 625 aa13.85□□□□□ -0.19
RNF4-210ENST00000508235 ZNHIT3Q15649 155 aaPredicted RBP13.85□□□□□ -0.19
RNF4-210ENST00000508235 PGS1Q32NB8 556 aa13.85□□□□□ -0.19
RNF4-210ENST00000508235 ZNF791Q3KP31 576 aaPredicted RBP13.85□□□□□ -0.19
RNF4-210ENST00000508235 MAVSQ7Z434 540 aa13.85□□□□□ -0.19
RNF4-210ENST00000508235 GALNTL5Q7Z4T8 443 aa13.85□□□□□ -0.19
RNF4-210ENST00000508235 ATCAYQ86WG3 371 aa13.85□□□□□ -0.19
RNF4-210ENST00000508235 ZNF227Q86WZ6 799 aa13.85□□□□□ -0.19
RNF4-210ENST00000508235 PSD4Q8NDX1 1056 aa13.85□□□□□ -0.19
RNF4-210ENST00000508235 OR8J2Q8NGG1 315 aa13.85□□□□□ -0.19
RNF4-210ENST00000508235 STON2Q8WXE9 905 aa13.85□□□□□ -0.19
RNF4-210ENST00000508235 OR5P2Q8WZ92 322 aa13.85□□□□□ -0.19
RNF4-210ENST00000508235 MAGED4Q96JG8 741 aa13.85□□□□□ -0.19
RNF4-210ENST00000508235 BTBD9Q96Q07 612 aa13.85□□□□□ -0.19
RNF4-210ENST00000508235 FOLH1BQ9HBA9 442 aa13.85□□□□□ -0.19
RNF4-210ENST00000508235 TCF7L2Q9NQB0 619 aa13.85□□□□□ -0.19
RNF4-210ENST00000508235 PCDHGB4Q9UN71 923 aa13.85□□□□□ -0.19
RNF4-210ENST00000508235 NPFFR2Q9Y5X5 522 aa13.85□□□□□ -0.19
RNF4-210ENST00000508235 TLN1Q9Y490 2541 aaKnown RBP13.85□□□□□ -0.19
RNF4-210ENST00000508235 TCP11X1B4DZS4 312 aa13.84□□□□□ -0.19
RNF4-210ENST00000508235 E9PBE3 544 aa13.84□□□□□ -0.19
RNF4-210ENST00000508235 RNASET2O00584 256 aaKnown RBP13.84□□□□□ -0.19
RNF4-210ENST00000508235 ANKRD28O15084 1053 aa13.84□□□□□ -0.19
RNF4-210ENST00000508235 TO15178 435 aa13.84□□□□□ -0.19
RNF4-210ENST00000508235 CFLARO15519 480 aa13.84□□□□□ -0.19
RNF4-210ENST00000508235 EDF1O60869 148 aaKnown RBP13.84□□□□□ -0.19
RNF4-210ENST00000508235 P04436 131 aa13.84□□□□□ -0.19
RNF4-210ENST00000508235 ALDOCP09972 364 aaKnown RBP13.84□□□□□ -0.19
RNF4-210ENST00000508235 PLA2G2AP14555 144 aa13.84□□□□□ -0.19
RNF4-210ENST00000508235 IRX1P78414 480 aaPredicted RBP13.84□□□□□ -0.19
RNF4-210ENST00000508235 ZNF155Q12901 538 aaPredicted RBP13.84□□□□□ -0.19
RNF4-210ENST00000508235 NTRK2Q16620 822 aa13.84□□□□□ -0.19
RNF4-210ENST00000508235 PDCD4Q53EL6 469 aaKnown RBP13.84□□□□□ -0.19
RNF4-210ENST00000508235 ANXA8L1Q5VT79 327 aa13.84□□□□□ -0.19
RNF4-210ENST00000508235 SLC22A10Q63ZE4 541 aa13.84□□□□□ -0.19
RNF4-210ENST00000508235 LYPD8Q6UX82 237 aa13.84□□□□□ -0.19
RNF4-210ENST00000508235 POGLUT1Q8NBL1 392 aa13.84□□□□□ -0.19
RNF4-210ENST00000508235 GLB1L3Q8NCI6 653 aaPredicted RBP13.84□□□□□ -0.19
RNF4-210ENST00000508235 SIMC1Q8NDZ2 872 aa13.84□□□□□ -0.19
RNF4-210ENST00000508235 GRHL3Q8TE85 626 aa13.84□□□□□ -0.19
RNF4-210ENST00000508235 FAR1Q8WVX9 515 aa13.84□□□□□ -0.19
RNF4-210ENST00000508235 VSTM2LQ96N03 204 aa13.84□□□□□ -0.19
RNF4-210ENST00000508235 MS4A4EQ96PG1 132 aa13.84□□□□□ -0.19
RNF4-210ENST00000508235 CCDC28BQ9BUN5 200 aa13.84□□□□□ -0.19
RNF4-210ENST00000508235 NXF5Q9H1B4 397 aaKnown RBP13.84□□□□□ -0.19
RNF4-210ENST00000508235 CLMPQ9H6B4 373 aa13.84□□□□□ -0.19
RNF4-210ENST00000508235 ANKRA2Q9H9E1 313 aa13.84□□□□□ -0.19
RNF4-210ENST00000508235 SACM1LQ9NTJ5 587 aa13.84□□□□□ -0.19
RNF4-210ENST00000508235 ASF1BQ9NVP2 202 aa13.84□□□□□ -0.19
RNF4-210ENST00000508235 CNIH4Q9P003 139 aa13.84□□□□□ -0.19
RNF4-210ENST00000508235 NTMQ9P121 344 aa13.84□□□□□ -0.19
RNF4-210ENST00000508235 DTX4Q9Y2E6 619 aa13.84□□□□□ -0.19
RNF4-210ENST00000508235 GPR55Q9Y2T6 319 aaPredicted RBP13.84□□□□□ -0.19
RNF4-210ENST00000508235 GPR45Q9Y5Y3 372 aa13.84□□□□□ -0.19
RNF4-210ENST00000508235 EXPH5Q8NEV8 1989 aa13.83□□□□□ -0.19
RNF4-210ENST00000508235 SPTA1P02549 2419 aa13.83□□□□□ -0.19
RNF4-210ENST00000508235 ASPDHA6ND91 283 aa13.83□□□□□ -0.2
RNF4-210ENST00000508235 EMC8O43402 210 aa13.83□□□□□ -0.2
RNF4-210ENST00000508235 ZNF354AO60765 605 aaPredicted RBP13.83□□□□□ -0.2
RNF4-210ENST00000508235 PSMG1O95456 288 aa13.83□□□□□ -0.2
RNF4-210ENST00000508235 CNR1P21554 472 aa13.83□□□□□ -0.2
RNF4-210ENST00000508235 ABCD3P28288 659 aa13.83□□□□□ -0.2
RNF4-210ENST00000508235 S100A3P33764 101 aa13.83□□□□□ -0.2
RNF4-210ENST00000508235 KRT20P35900 424 aa13.83□□□□□ -0.2
RNF4-210ENST00000508235 IDH3AP50213 366 aa13.83□□□□□ -0.2
RNF4-210ENST00000508235 CDK9P50750 372 aaKnown RBP13.83□□□□□ -0.2
RNF4-210ENST00000508235 AQP5P55064 265 aa13.83□□□□□ -0.2
RNF4-210ENST00000508235 STX1BP61266 288 aa13.83□□□□□ -0.2
RNF4-210ENST00000508235 LRRC74AQ0VAA2 488 aa13.83□□□□□ -0.2
RNF4-210ENST00000508235 NNATQ16517 81 aa13.83□□□□□ -0.2
RNF4-210ENST00000508235 VPS26BQ4G0F5 336 aa13.83□□□□□ -0.2
RNF4-210ENST00000508235 TBCELQ5QJ74 424 aa13.83□□□□□ -0.2
RNF4-210ENST00000508235 ZCCHC12Q6PEW1 402 aa13.83□□□□□ -0.2
RNF4-210ENST00000508235 BHLHB9Q6PI77 547 aa13.83□□□□□ -0.2
RNF4-210ENST00000508235 TMEM64Q6YI46 380 aa13.83□□□□□ -0.2
RNF4-210ENST00000508235 GK5Q6ZS86 529 aa13.83□□□□□ -0.2
RNF4-210ENST00000508235 MDGA2Q7Z553 956 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms