RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 ZNF701Q9NV72 531 aaPredicted RBP4.65□□□□□ -1.67
SNRNP40-204ENST00000474025 ZNF226Q9NYT6 803 aa4.65□□□□□ -1.67
SNRNP40-204ENST00000474025 WWOXQ9NZC7 414 aa4.65□□□□□ -1.67
SNRNP40-204ENST00000474025 PHF11Q9UIL8 331 aa4.65□□□□□ -1.67
SNRNP40-204ENST00000474025 DCTN4Q9UJW0 460 aa4.65□□□□□ -1.67
SNRNP40-204ENST00000474025 DTX4Q9Y2E6 619 aa4.65□□□□□ -1.67
SNRNP40-204ENST00000474025 EXPH5Q8NEV8 1989 aa4.65□□□□□ -1.67
SNRNP40-204ENST00000474025 PKD1L1Q8TDX9 2849 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 CMYA5Q8N3K9 4069 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 A0A0A6YYD5 115 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 A0A1W2PR48 441 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 GLOD5A6NK44 160 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 DNALI1O14645 258 aaPredicted RBP4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 TMPRSS11DO60235 418 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 ICOSLGO75144 302 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 EEDO75530 441 aaKnown RBP4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 PPM1BO75688 479 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 SMNDC1O75940 238 aaKnown RBP eCLIP4.64□□□□□ -1.677e-8■□□□□ 8.7
SNRNP40-204ENST00000474025 AIFM1O95831 613 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 CRHP06850 196 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 ABCB1P08183 1280 aaPredicted RBP4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 CT62P0C5K7 136 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 RHOXF2BP0C7M4 288 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 SLC35E2BP0CK96 405 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 SLC35E2P0CK97 266 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 NR2F6P10588 404 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 PCNAP12004 261 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 CHMP24386 653 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 MAPK1P28482 360 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 SERPINB1P30740 379 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 TLX1P31314 330 aaPredicted RBP4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 GCKP35557 465 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 PTGDSP41222 190 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 ELK3P41970 407 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 CLDN18P56856 261 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 NRG3P56975 720 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 RPS13P62277 151 aaKnown RBP4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 RPP38P78345 283 aaKnown RBP4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 SRYQ05066 204 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 FRG1Q14331 258 aaKnown RBP4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 SETDB1Q15047 1291 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 NNATQ16517 81 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 HIST2H2ACQ16777 129 aaPredicted RBP4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 KBTBD12Q3ZCT8 623 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 HP1BP3Q5SSJ5 553 aaPredicted RBP4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 DEPDC1Q5TB30 811 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 HIST2H2AA3Q6FI13 130 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 SULT1C3Q6IMI6 304 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 MED27Q6P2C8 311 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 SCIMPQ6UWF3 145 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 ENPP6Q6UWR7 440 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 ZNF662Q6ZS27 426 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 C22orf34Q6ZV56 151 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 PLEKHM3Q6ZWE6 761 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 LRRC70Q7Z2Q7 622 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 BTLAQ7Z6A9 289 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 IFNEQ86WN2 208 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 GPSM1Q86YR5 675 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 GRAMD2AQ8IUY3 354 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 GALNT12Q8IXK2 581 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 SPATA6LQ8N4H0 392 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 WDSUB1Q8N9V3 476 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 TRIM58Q8NG06 486 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 HUS1BQ8NHY5 278 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 TMEM171Q8WVE6 324 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 HGDQ93099 445 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 UCN3Q969E3 161 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 UBE2E3Q969T4 207 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 RGMAQ96B86 450 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 CMTM7Q96FZ5 175 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 FAM111AQ96PZ2 611 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 MCMBPQ9BTE3 642 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 OSBPL11Q9BXB4 747 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 AMBRA1Q9C0C7 1298 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 NXF5Q9H1B4 397 aaKnown RBP4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 OPN3Q9H1Y3 402 aaPredicted RBP4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 CXorf56Q9H5V9 222 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 METTL7AQ9H8H3 244 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 ACTR8Q9H981 624 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 POPDC3Q9HBV1 291 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 LZTFL1Q9NQ48 299 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 HEY2Q9UBP5 337 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 ADGRE2Q9UHX3 823 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 PTBP2Q9UKA9 531 aaKnown RBP4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 RNF112Q9ULX5 631 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 MAPRE3Q9UPY8 281 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 EXO1Q9UQ84 846 aaKnown RBP4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 CHMP2BQ9UQN3 213 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 DLGAP4Q9Y2H0 992 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 ASB4Q9Y574 426 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 TEX264Q9Y6I9 313 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 PRR14LQ5THK1 2151 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 TRRAPQ9Y4A5 3859 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 MGAM2Q2M2H8 2515 aa4.64□□□□□ -1.67
SNRNP40-204ENST00000474025 PRKDCP78527 4128 aaKnown RBP4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 A0A087X1B8 175 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 PRAMEF25A6NGN4 478 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 LRRC14BA6NHZ5 514 aa4.63□□□□□ -1.67
SNRNP40-204ENST00000474025 SLC22A20A6NK97 555 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms