RNA–Protein interactions for RNA: ENST00000451088.6

GTF3C3-207, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-207ENST00000451088 WRAP53Q9BUR4 548 aaKnown RBP3.9□□□□□ -1.79
GTF3C3-207ENST00000451088 APOOQ9BUR5 198 aa3.9□□□□□ -1.79
GTF3C3-207ENST00000451088 LRRC61Q9BV99 259 aa3.9□□□□□ -1.79
GTF3C3-207ENST00000451088 DHX35Q9H5Z1 703 aaKnown RBP3.9□□□□□ -1.79
GTF3C3-207ENST00000451088 LRRC19Q9H756 370 aa3.9□□□□□ -1.79
GTF3C3-207ENST00000451088 SYNDIG1Q9H7V2 258 aa3.9□□□□□ -1.79
GTF3C3-207ENST00000451088 PHPT1Q9NRX4 125 aaPredicted RBP3.9□□□□□ -1.79
GTF3C3-207ENST00000451088 APPL1Q9UKG1 709 aa3.9□□□□□ -1.79
GTF3C3-207ENST00000451088 NEU3Q9UQ49 428 aa3.9□□□□□ -1.79
GTF3C3-207ENST00000451088 ITM2BQ9Y287 266 aa3.9□□□□□ -1.79
GTF3C3-207ENST00000451088 U3KQA8 63 aa3.9□□□□□ -1.79
GTF3C3-207ENST00000451088 CROCCQ5TZA2 2017 aa3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 D6RAR5 112 aa3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 DFFAO00273 331 aa3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 NUDT21O43809 227 aaKnown RBP3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 RECQL5O94762 991 aaPredicted RBP3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 CD160O95971 181 aa3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 APOHP02749 345 aaPredicted RBP3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 PCCBP05166 539 aa3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 RPLP0P05388 317 aaKnown RBP3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 TEAD1P28347 426 aa3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 UGT1A5P35504 534 aa3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 TRIM23P36406 574 aa3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 ARL1P40616 181 aaPredicted RBP3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 HOXA1P49639 335 aaPredicted RBP3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 VEGFCP49767 419 aa3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 KLK7P49862 253 aa3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 KRTAP10-12P60413 245 aa3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 ISL1P61371 349 aa3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 RPL7AP62424 266 aaKnown RBP3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 CSNK2A1P68400 391 aaPredicted RBP3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 KLHL30Q0D2K2 578 aa3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 GAGE5Q13069 117 aa3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 GAGE6Q13070 117 aa3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 TRA2AQ13595 282 aaKnown RBP eCLIP3.89□□□□□ -1.796e-7■■■■□ 25.8
GTF3C3-207ENST00000451088 PIGHQ14442 188 aaPredicted RBP3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 FGFBP1Q14512 234 aa3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 CYTH1Q15438 398 aa3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 ALG11Q2TAA5 492 aa3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 CCDC92Q53HC0 331 aaPredicted RBP3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 PDSS1Q5T2R2 415 aa3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 ARMC12Q5T9G4 340 aa3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 PNCKQ6P2M8 343 aa3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 KCTD8Q6ZWB6 473 aa3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 DPPA4Q7L190 304 aa3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 ARHGAP22Q7Z5H3 698 aa3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 PHLDB2Q86SQ0 1253 aa3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 ZFAND4Q86XD8 727 aa3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 MAP7D3Q8IWC1 876 aa3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 BEST3Q8N1M1 668 aa3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 PYROXD2Q8N2H3 581 aa3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 FBXO39Q8N4B4 442 aa3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 ATPAF2Q8N5M1 289 aa3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 SMYD1Q8NB12 490 aa3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 CSNK2A3Q8NEV1 391 aa3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 OR8K1Q8NGG5 319 aa3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 OR5R1Q8NH85 324 aa3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 RHBDF1Q96CC6 855 aa3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 ECHDC3Q96DC8 303 aa3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 NUS1Q96E22 293 aa3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 GRAMD2BQ96HH9 432 aa3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 RSRC1Q96IZ7 334 aaKnown RBP3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 CELF6Q96J87 481 aaKnown RBP3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 LURAP1Q96LR2 239 aa3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 ZNF583Q96ND8 569 aa3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 ALS2CR12Q96Q35 445 aa3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 PSKH2Q96QS6 385 aa3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 GSDMCQ9BYG8 508 aa3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 DPEP2Q9H4A9 486 aa3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 PDFQ9HBH1 243 aa3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 EPB41L5Q9HCM4 733 aa3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 SCRT2Q9NQ03 307 aa3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 MBNL1Q9NR56 388 aaKnown RBP3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 AIPL1Q9NZN9 384 aa3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 RCOR3Q9P2K3 495 aaPredicted RBP3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 LHX3Q9UBR4 397 aa3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 PCSK1NQ9UHG2 260 aa3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 AMACRQ9UHK6 382 aa3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 ENTPD4Q9Y227 616 aa3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 GMEB1Q9Y692 573 aa3.89□□□□□ -1.79
GTF3C3-207ENST00000451088 FAM170AA1A519 330 aa3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 K7EM74 188 aa3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 EPHB6O15197 1021 aa3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 CASC3O15234 703 aaKnown RBP3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 SEC31AO94979 1220 aaKnown RBP3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 PIGNO95427 931 aa3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 NADKO95544 446 aaPredicted RBP3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 CPNE6O95741 557 aa3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 PRSS1P07477 247 aa3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 CCNB1P14635 433 aa3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 IDO1P14902 403 aa3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 EZRP15311 586 aaKnown RBP3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 ZNF30P17039 623 aa3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 ERCC2P18074 760 aa3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 OAS2P29728 719 aaKnown RBP3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 MIPP30301 263 aa3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 CPOXP36551 454 aa3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 LMAN1P49257 510 aa3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 CLNS1AP54105 237 aaKnown RBP3.88□□□□□ -1.79
GTF3C3-207ENST00000451088 ATP12AP54707 1039 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms