RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 MGAT1P26572 445 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 HMGCLP35914 325 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 IGHMBP2P38935 993 aaKnown RBP1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 NAA10P41227 235 aaPredicted RBP1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 KIR3DL2P43630 455 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 CLDN20P56880 219 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 CARD18P57730 90 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 GANABQ14697 944 aaKnown RBP1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 SGCAQ16586 387 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 ALKBH6Q3KRA9 238 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 FASTKD1Q53R41 847 aaKnown RBP1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 CT45A2Q5DJT8 189 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 MDH1BQ5I0G3 518 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 IGFL2Q6UWQ7 119 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 CCNI2Q6ZMN8 369 aaPredicted RBP1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 SLC16A9Q7RTY1 509 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 TMEM126BQ8IUX1 230 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 NELFCDQ8IXH7 590 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 MARVELD2Q8N4S9 558 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 TRIML1Q8N9V2 468 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 HMGB4Q8WW32 186 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 NRBF2Q96F24 287 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 FAM81BQ96LP2 452 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 DERL2Q9GZP9 239 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 FAM192AQ9GZU8 254 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 ASB8Q9H765 288 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 C8orf33Q9H7E9 229 aaPredicted RBP1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 EVA1AQ9H8M9 152 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 RCOR3Q9P2K3 495 aaPredicted RBP1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 KLHL21Q9UJP4 597 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 ST3GAL5Q9UNP4 418 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 ABCG2Q9UNQ0 655 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 UGT2A1Q9Y4X1 527 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 PTPRBP23467 1997 aa1.65□□□□□ -2.15
SMARCAD1-202ENST00000359052 ARHGEF37A1IGU5 675 aa1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 CFAP73A6NFT4 308 aa1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 KRTAP9-7A8MTY7 169 aa1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 RS1O15537 224 aa1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 SMC2O95347 1197 aa1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 HLA-DQB1P01920 261 aa1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 PRF1P14222 555 aa1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 HSPA9P38646 679 aaKnown RBP1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 ACTR1BP42025 376 aa1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 SGSHP51688 502 aa1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 HNRNPFP52597 415 aaKnown RBP1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 SARNPP82979 210 aaKnown RBP1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 SLC25A3Q00325 362 aa1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 SEMG2Q02383 582 aa1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 SLAQ13239 276 aa1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 LTB4RQ15722 352 aa1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 EZH2Q15910 746 aaKnown RBP1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 CNPY1Q3B7I2 92 aa1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 DPCR1Q3MIW9 517 aa1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 LCE4AQ5TA78 99 aa1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 TTC23LQ6PF05 361 aa1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 MOB3CQ70IA8 216 aa1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 CLNKQ7Z7G1 428 aa1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 GPSM1Q86YR5 675 aa1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 LRRC15Q8TF66 581 aa1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 NAT14Q8WUY8 206 aa1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 CCDC43Q96MW1 224 aaKnown RBP1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 GDAP1L1Q96MZ0 367 aa1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 ACCSQ96QU6 501 aa1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 P2RY13Q9BPV8 354 aa1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 SPATA25Q9BR10 227 aa1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 NPLQ9BXD5 320 aaPredicted RBP1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 DHX33Q9H6R0 707 aaKnown RBP1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 PPP1R3EQ9H7J1 279 aa1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 KAT14Q9H8E8 782 aa1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 DUSP22Q9NRW4 184 aa1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 TAB2Q9NYJ8 693 aa1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 WRAP73Q9P2S5 460 aaPredicted RBP1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 CCNL1Q9UK58 526 aaPredicted RBP1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 PKD1P98161 4303 aa1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 FAM240BA0A1B0GVZ2 78 aa1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 LINC00862A6NCI5 91 aa1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 ZNF840PA6NDX5 716 aa1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 BTBD17A6NE02 478 aa1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 PRAMEF25A6NGN4 478 aa1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 MYMKA6NI61 221 aa1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 ZNF587BE7ETH6 402 aa1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 PSMD9O00233 223 aa1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 CLDN4O14493 209 aa1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 ADAM10O14672 748 aa1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 TOX3O15405 576 aaPredicted RBP1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 MSI1O43347 362 aaKnown RBP1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 HYAL3O43820 417 aaPredicted RBP1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 CEP104O60308 925 aa1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 ATP6V1G1O75348 118 aa1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 AKR7A3O95154 331 aa1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 SPDEFO95238 335 aa1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 HPP00738 406 aa1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 NUDT17P0C025 328 aa1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 LAP3P28838 519 aa1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 PSMD7P51665 324 aa1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 NXPH1P58417 271 aa1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 SCN1BQ07699 218 aa1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 INCA1Q0VD86 236 aa1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 CSHL1Q14406 222 aa1.64□□□□□ -2.15
SMARCAD1-202ENST00000359052 LY6G6FQ5SQ64 297 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms