RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 AMER3Q8N944 861 aa8.2□□□□□ -1.1
CLK1-201ENST00000321356 ASCC1Q8N9N2 400 aaKnown RBP8.2□□□□□ -1.1
CLK1-201ENST00000321356 SYT14Q8NB59 555 aa8.2□□□□□ -1.1
CLK1-201ENST00000321356 SIMC1Q8NDZ2 872 aa8.2□□□□□ -1.1
CLK1-201ENST00000321356 SUN3Q8TAQ9 357 aa8.2□□□□□ -1.1
CLK1-201ENST00000321356 SFXN5Q8TD22 340 aa8.2□□□□□ -1.1
CLK1-201ENST00000321356 XAGE5Q8WWM1 108 aa8.2□□□□□ -1.1
CLK1-201ENST00000321356 OR8D1Q8WZ84 308 aa8.2□□□□□ -1.1
CLK1-201ENST00000321356 TMEM203Q969S6 136 aa8.2□□□□□ -1.1
CLK1-201ENST00000321356 NXPE3Q969Y0 559 aa8.2□□□□□ -1.1
CLK1-201ENST00000321356 RNFT2Q96EX2 444 aa8.2□□□□□ -1.1
CLK1-201ENST00000321356 DIRAS2Q96HU8 199 aa8.2□□□□□ -1.1
CLK1-201ENST00000321356 PRAP1Q96NZ9 151 aa8.2□□□□□ -1.1
CLK1-201ENST00000321356 LRRC3BQ96PB8 259 aa8.2□□□□□ -1.1
CLK1-201ENST00000321356 DPH7Q9BTV6 452 aa8.2□□□□□ -1.1
CLK1-201ENST00000321356 AICDAQ9GZX7 198 aa8.2□□□□□ -1.1
CLK1-201ENST00000321356 MMP28Q9H239 520 aa8.2□□□□□ -1.1
CLK1-201ENST00000321356 KCNK12Q9HB15 430 aa8.2□□□□□ -1.1
CLK1-201ENST00000321356 SLC35C2Q9NQQ7 365 aa8.2□□□□□ -1.1
CLK1-201ENST00000321356 ZCCHC3Q9NUD5 404 aaKnown RBP8.2□□□□□ -1.1
CLK1-201ENST00000321356 DDX28Q9NUL7 540 aaKnown RBP8.2□□□□□ -1.1
CLK1-201ENST00000321356 TMEM98Q9Y2Y6 226 aa8.2□□□□□ -1.1
CLK1-201ENST00000321356 EXOSC1Q9Y3B2 195 aaKnown RBP8.2□□□□□ -1.1
CLK1-201ENST00000321356 PRKAB1Q9Y478 270 aa8.2□□□□□ -1.1
CLK1-201ENST00000321356 A0A087WUU8 490 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 EDDM13A0A1B0GTR0 161 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 ANKRD34BA5PLL1 514 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 CCDC182A6NF36 153 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 SNTNA6NMZ2 147 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 PRRT4C9JH25 899 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 MAN2B1O00754 1011 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 SLC30A4O14863 429 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 TFECO14948 347 aaPredicted RBP8.19□□□□□ -1.1
CLK1-201ENST00000321356 LCMT2O60294 686 aaKnown RBP8.19□□□□□ -1.1
CLK1-201ENST00000321356 TMCC2O75069 709 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 CLEC3AO75596 197 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 UBXN7O94888 489 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 MYL9P24844 172 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 GPC1P35052 558 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 MLLT3P42568 568 aaPredicted RBP8.19□□□□□ -1.1
CLK1-201ENST00000321356 MTNR1AP48039 350 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 SLC6A11P48066 632 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 ERVFC1P60507 584 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 CSNK1G2P78368 415 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 GPR19Q15760 415 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 TCEAL5Q5H9L2 206 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 PDZK1Q5T2W1 519 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 NDUFAF5Q5TEU4 345 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 C1orf53Q5VUE5 145 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 FAM46CQ5VWP2 391 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 SLC27A4Q6P1M0 643 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 OLIG3Q7RTU3 272 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 GALNT12Q8IXK2 581 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 ETFBKMTQ8IXQ9 262 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 LINC01555Q8NAE3 123 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 PLA2G15Q8NCC3 412 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 OR8D4Q8NGM9 314 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 OR52P1PQ8NH57 321 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 NR4A3Q92570 626 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 AP3S1Q92572 193 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 UFD1Q92890 307 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 ZC3HAV1LQ96H79 300 aaKnown RBP8.19□□□□□ -1.1
CLK1-201ENST00000321356 DEPDC7Q96QD5 511 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 ARHGAP9Q9BRR9 750 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 PINK1Q9BXM7 581 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 PPP1R3EQ9H7J1 279 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 ANKRA2Q9H9E1 313 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 TRPC4Q9UBN4 977 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.19□□□□□ -1.1
CLK1-201ENST00000321356 MYO10Q9HD67 2058 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 IGKV1-8A0A0C4DH67 115 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 A0A0G2JPF8 293 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 TRDV1A0A1B0GX56 115 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 LRIT2A6NDA9 550 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 A6NL46 340 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 A8MV72 311 aaPredicted RBP8.19□□□□□ -1.1
CLK1-201ENST00000321356 HNRNPCL2B2RXH8 293 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 HNRNPCL3B7ZW38 293 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 SYT5O00445 386 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 PPM1DO15297 605 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 OR1F1O43749 312 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 HCN1O60741 890 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 EFCAB14O75071 495 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 FGBP02675 491 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 HNRNPCL4P0DMR1 293 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 HLA-DMAP28067 261 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 KIR2DL3P43628 341 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 ANXA11P50995 505 aaKnown RBP8.19□□□□□ -1.1
CLK1-201ENST00000321356 TAS2R38P59533 333 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 PPP3R1P63098 170 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 NTHL1P78549 312 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 MRPS15P82914 257 aaKnown RBP8.19□□□□□ -1.1
CLK1-201ENST00000321356 FABP5Q01469 135 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 TSPAN31Q12999 210 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 RIN1Q13671 783 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 GNA13Q14344 377 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 ELAVL3Q14576 367 aaKnown RBP8.19□□□□□ -1.1
CLK1-201ENST00000321356 CRTC2Q53ET0 693 aaPredicted RBP8.19□□□□□ -1.1
CLK1-201ENST00000321356 GPAT3Q53EU6 434 aa8.19□□□□□ -1.1
CLK1-201ENST00000321356 THOC7Q6I9Y2 204 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms