RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 TOXO94900 526 aa16.34■□□□□ 0.21
GABRB3-202ENST00000311550 CD40LGP29965 261 aa16.34■□□□□ 0.21
GABRB3-202ENST00000311550 FCRLBQ6BAA4 426 aa16.34■□□□□ 0.21
GABRB3-202ENST00000311550 SLC25A25Q6KCM7 469 aa16.34■□□□□ 0.21
GABRB3-202ENST00000311550 CEP68Q76N32 757 aa16.34■□□□□ 0.21
GABRB3-202ENST00000311550 CPXM2Q8N436 756 aa16.34■□□□□ 0.21
GABRB3-202ENST00000311550 OR56A3Q8NH54 315 aa16.34■□□□□ 0.21
GABRB3-202ENST00000311550 ISG20Q96AZ6 181 aaKnown RBP16.34■□□□□ 0.21
GABRB3-202ENST00000311550 SAMD8Q96LT4 415 aa16.34■□□□□ 0.21
GABRB3-202ENST00000311550 A0A0G2JPF8 293 aa16.34■□□□□ 0.21
GABRB3-202ENST00000311550 HNRNPCL3B7ZW38 293 aa16.34■□□□□ 0.21
GABRB3-202ENST00000311550 LDOC1O95751 146 aaPredicted RBP16.34■□□□□ 0.21
GABRB3-202ENST00000311550 PTTG1O95997 202 aa16.34■□□□□ 0.21
GABRB3-202ENST00000311550 HNRNPCL4P0DMR1 293 aa16.34■□□□□ 0.21
GABRB3-202ENST00000311550 SSTR4P31391 388 aa16.34■□□□□ 0.21
GABRB3-202ENST00000311550 ARHGAP40Q5TG30 622 aa16.34■□□□□ 0.21
GABRB3-202ENST00000311550 BADQ92934 168 aa16.34■□□□□ 0.21
GABRB3-202ENST00000311550 CCDC32Q9BV29 185 aa16.34■□□□□ 0.21
GABRB3-202ENST00000311550 TRPV4Q9HBA0 871 aa16.34■□□□□ 0.21
GABRB3-202ENST00000311550 SRA1Q9HD15 236 aaKnown RBP16.34■□□□□ 0.21
GABRB3-202ENST00000311550 MRPL15Q9P015 296 aaKnown RBP16.34■□□□□ 0.21
GABRB3-202ENST00000311550 DNMT3AQ9Y6K1 912 aaPredicted RBP16.34■□□□□ 0.21
GABRB3-202ENST00000311550 MARF1Q9Y4F3 1742 aaKnown RBP16.34■□□□□ 0.21
GABRB3-202ENST00000311550 COL16A1Q07092 1604 aaPredicted RBP16.34■□□□□ 0.21
GABRB3-202ENST00000311550 CPED1A4D0V7 1026 aa16.34■□□□□ 0.21
GABRB3-202ENST00000311550 PIM1P11309 404 aaPredicted RBP16.34■□□□□ 0.21
GABRB3-202ENST00000311550 PSMB5P28074 263 aa16.34■□□□□ 0.21
GABRB3-202ENST00000311550 OR3A3P47888 321 aa16.34■□□□□ 0.21
GABRB3-202ENST00000311550 OR3A2P47893 321 aa16.34■□□□□ 0.21
GABRB3-202ENST00000311550 DAPP51397 102 aa16.34■□□□□ 0.21
GABRB3-202ENST00000311550 RPA4Q13156 261 aa16.34■□□□□ 0.21
GABRB3-202ENST00000311550 SEC23BQ15437 767 aa16.34■□□□□ 0.21
GABRB3-202ENST00000311550 MPP7Q5T2T1 576 aa16.34■□□□□ 0.21
GABRB3-202ENST00000311550 DPPA4Q7L190 304 aa16.34■□□□□ 0.21
GABRB3-202ENST00000311550 ZNF550Q7Z398 422 aa16.34■□□□□ 0.21
GABRB3-202ENST00000311550 OR2L3Q8NG85 312 aa16.34■□□□□ 0.21
GABRB3-202ENST00000311550 OR9A2Q8NGT5 310 aa16.34■□□□□ 0.21
GABRB3-202ENST00000311550 WDR20Q8TBZ3 569 aa16.34■□□□□ 0.21
GABRB3-202ENST00000311550 MARCH5Q9NX47 278 aa16.34■□□□□ 0.21
GABRB3-202ENST00000311550 PHIPQ8WWQ0 1821 aa16.34■□□□□ 0.21
GABRB3-202ENST00000311550 SDK1Q7Z5N4 2213 aa16.34■□□□□ 0.21
GABRB3-202ENST00000311550 IGLV3-10A0A075B6K4 115 aa16.34■□□□□ 0.21
GABRB3-202ENST00000311550 TLX3O43711 291 aaPredicted RBP16.34■□□□□ 0.21
GABRB3-202ENST00000311550 ARPC4P59998 168 aa16.34■□□□□ 0.21
GABRB3-202ENST00000311550 ARMCX6Q7L4S7 300 aa16.34■□□□□ 0.21
GABRB3-202ENST00000311550 WDR53Q7Z5U6 358 aaPredicted RBP16.34■□□□□ 0.21
GABRB3-202ENST00000311550 PLA2G15Q8NCC3 412 aa16.34■□□□□ 0.21
GABRB3-202ENST00000311550 OR51L1Q8NGJ5 315 aa16.34■□□□□ 0.21
GABRB3-202ENST00000311550 KCNN1Q92952 543 aa16.34■□□□□ 0.21
GABRB3-202ENST00000311550 TRMT2BQ96GJ1 504 aaKnown RBP16.34■□□□□ 0.21
GABRB3-202ENST00000311550 SLC41A3Q96GZ6 507 aa16.34■□□□□ 0.21
GABRB3-202ENST00000311550 FARSAQ9Y285 508 aaKnown RBP16.34■□□□□ 0.21
GABRB3-202ENST00000311550 L7N2F9 121 aa16.33■□□□□ 0.21
GABRB3-202ENST00000311550 SHC2P98077 582 aa16.33■□□□□ 0.21
GABRB3-202ENST00000311550 RUNX3Q13761 415 aa16.33■□□□□ 0.21
GABRB3-202ENST00000311550 APOFQ13790 326 aa16.33■□□□□ 0.21
GABRB3-202ENST00000311550 GAS6Q14393 721 aa16.33■□□□□ 0.21
GABRB3-202ENST00000311550 LEXMQ3ZCV2 418 aa16.33■□□□□ 0.21
GABRB3-202ENST00000311550 EOGTQ5NDL2 527 aa16.33■□□□□ 0.21
GABRB3-202ENST00000311550 TBPL2Q6SJ96 375 aa16.33■□□□□ 0.21
GABRB3-202ENST00000311550 RASGEF1AQ8N9B8 481 aa16.33■□□□□ 0.21
GABRB3-202ENST00000311550 SPEF1Q9Y4P9 236 aa16.33■□□□□ 0.21
GABRB3-202ENST00000311550 CSNK1G3Q9Y6M4 447 aa16.33■□□□□ 0.21
GABRB3-202ENST00000311550 A0A1B0GTW7 788 aa16.33■□□□□ 0.2
GABRB3-202ENST00000311550 PCP4L1A6NKN8 68 aa16.33■□□□□ 0.2
GABRB3-202ENST00000311550 VRK3Q8IV63 474 aa16.33■□□□□ 0.2
GABRB3-202ENST00000311550 CSNK1A1LQ8N752 337 aa16.33■□□□□ 0.2
GABRB3-202ENST00000311550 EVA1BQ9NVM1 165 aa16.33■□□□□ 0.2
GABRB3-202ENST00000311550 AGAP5A6NIR3 686 aa16.33■□□□□ 0.2
GABRB3-202ENST00000311550 NPIPA5E9PKD4 350 aa16.33■□□□□ 0.2
GABRB3-202ENST00000311550 HMGN2P05204 90 aaKnown RBP16.33■□□□□ 0.2
GABRB3-202ENST00000311550 GP1BBP13224 206 aa16.33■□□□□ 0.2
GABRB3-202ENST00000311550 VAMP1P23763 118 aa16.33■□□□□ 0.2
GABRB3-202ENST00000311550 RPL34P49207 117 aaKnown RBP16.33■□□□□ 0.2
GABRB3-202ENST00000311550 PSMA6P60900 246 aaKnown RBP16.33■□□□□ 0.2
GABRB3-202ENST00000311550 RPS15AP62244 130 aaKnown RBP16.33■□□□□ 0.2
GABRB3-202ENST00000311550 ZNF761Q86XN6 746 aaPredicted RBP16.33■□□□□ 0.2
GABRB3-202ENST00000311550 PTCHD1Q96NR3 888 aa16.33■□□□□ 0.2
GABRB3-202ENST00000311550 CPNE5Q9HCH3 593 aa16.33■□□□□ 0.2
GABRB3-202ENST00000311550 HCN3Q9P1Z3 774 aa16.33■□□□□ 0.2
GABRB3-202ENST00000311550 NPIPA1Q9UND3 350 aa16.33■□□□□ 0.2
GABRB3-202ENST00000311550 ERVK-11Q9UQG0 969 aa16.33■□□□□ 0.2
GABRB3-202ENST00000311550 TRBV2A0A0J9YWF9 115 aa16.33■□□□□ 0.2
GABRB3-202ENST00000311550 WASH3PC4AMC7 463 aa16.33■□□□□ 0.2
GABRB3-202ENST00000311550 SOX1O00570 391 aaPredicted RBP16.33■□□□□ 0.2
GABRB3-202ENST00000311550 RNF13O43567 381 aa16.33■□□□□ 0.2
GABRB3-202ENST00000311550 RGS9O75916 674 aaPredicted RBP16.33■□□□□ 0.2
GABRB3-202ENST00000311550 C1orf105O95561 183 aa16.33■□□□□ 0.2
GABRB3-202ENST00000311550 IL7P13232 177 aa16.33■□□□□ 0.2
GABRB3-202ENST00000311550 SLC6A9P48067 706 aa16.33■□□□□ 0.2
GABRB3-202ENST00000311550 Q8N9G6 341 aaPredicted RBP16.33■□□□□ 0.2
GABRB3-202ENST00000311550 OR4K13Q8NH42 304 aa16.33■□□□□ 0.2
GABRB3-202ENST00000311550 CCDC107Q8WV48 283 aa16.33■□□□□ 0.2
GABRB3-202ENST00000311550 GGHQ92820 318 aa16.33■□□□□ 0.2
GABRB3-202ENST00000311550 DTD2Q96FN9 168 aa16.33■□□□□ 0.2
GABRB3-202ENST00000311550 SLC17A9Q9BYT1 436 aa16.33■□□□□ 0.2
GABRB3-202ENST00000311550 MMP28Q9H239 520 aa16.33■□□□□ 0.2
GABRB3-202ENST00000311550 PELI2Q9HAT8 420 aa16.33■□□□□ 0.2
GABRB3-202ENST00000311550 ABCD2Q9UBJ2 740 aa16.33■□□□□ 0.2
GABRB3-202ENST00000311550 TAPBPO15533 448 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms