RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 REEP3Q6NUK4 255 aa19.44■□□□□ 0.7
PNKP-203ENST00000593946 MFSD12Q6NUT3 480 aa19.44■□□□□ 0.7
PNKP-203ENST00000593946 CBLL1Q75N03 491 aa19.44■□□□□ 0.7
PNKP-203ENST00000593946 VWA5B2Q8N398 1253 aa19.44■□□□□ 0.7
PNKP-203ENST00000593946 TMEM102Q8N9M5 508 aaPredicted RBP19.44■□□□□ 0.7
PNKP-203ENST00000593946 RBM18Q96H35 190 aaKnown RBP19.44■□□□□ 0.7
PNKP-203ENST00000593946 YIPF4Q9BSR8 244 aa19.44■□□□□ 0.7
PNKP-203ENST00000593946 ACTRT3Q9BYD9 372 aa19.44■□□□□ 0.7
PNKP-203ENST00000593946 EQTNQ9NQ60 294 aa19.44■□□□□ 0.7
PNKP-203ENST00000593946 FBXO8Q9NRD0 319 aa19.44■□□□□ 0.7
PNKP-203ENST00000593946 P2RX2Q9UBL9 471 aa19.44■□□□□ 0.7
PNKP-203ENST00000593946 RPS6KA6Q9UK32 745 aa19.44■□□□□ 0.7
PNKP-203ENST00000593946 ZNF292O60281 2723 aa19.43■□□□□ 0.7
PNKP-203ENST00000593946 IGKV3D-11A0A0A0MRZ8 115 aa19.43■□□□□ 0.7
PNKP-203ENST00000593946 PRAMEF27A3QJZ7 478 aa19.43■□□□□ 0.7
PNKP-203ENST00000593946 CASQ2O14958 399 aaPredicted RBP19.43■□□□□ 0.7
PNKP-203ENST00000593946 POLR1CO15160 346 aaPredicted RBP19.43■□□□□ 0.7
PNKP-203ENST00000593946 ASNA1O43681 348 aa19.43■□□□□ 0.7
PNKP-203ENST00000593946 GDF9O60383 454 aa19.43■□□□□ 0.7
PNKP-203ENST00000593946 TIPRLO75663 272 aa19.43■□□□□ 0.7
PNKP-203ENST00000593946 ONECUT2O95948 504 aa19.43■□□□□ 0.7
PNKP-203ENST00000593946 BCHEP06276 602 aa19.43■□□□□ 0.7
PNKP-203ENST00000593946 RAP2AP10114 183 aa19.43■□□□□ 0.7
PNKP-203ENST00000593946 EIF3MQ7L2H7 374 aaKnown RBP19.43■□□□□ 0.7
PNKP-203ENST00000593946 ERMP1Q7Z2K6 904 aa19.43■□□□□ 0.7
PNKP-203ENST00000593946 GALNT12Q8IXK2 581 aa19.43■□□□□ 0.7
PNKP-203ENST00000593946 METTL25Q8N6Q8 603 aa19.43■□□□□ 0.7
PNKP-203ENST00000593946 DOK4Q8TEW6 326 aa19.43■□□□□ 0.7
PNKP-203ENST00000593946 XAGE5Q8WWM1 108 aa19.43■□□□□ 0.7
PNKP-203ENST00000593946 LRTOMTQ8WZ04 291 aa19.43■□□□□ 0.7
PNKP-203ENST00000593946 CLIP3Q96DZ5 547 aa19.43■□□□□ 0.7
PNKP-203ENST00000593946 RNF31Q96EP0 1072 aa19.43■□□□□ 0.7
PNKP-203ENST00000593946 RNF145Q96MT1 663 aa19.43■□□□□ 0.7
PNKP-203ENST00000593946 PTCHD1Q96NR3 888 aa19.43■□□□□ 0.7
PNKP-203ENST00000593946 DGAT2Q96PD7 388 aa19.43■□□□□ 0.7
PNKP-203ENST00000593946 OR7D2Q96RA2 312 aa19.43■□□□□ 0.7
PNKP-203ENST00000593946 MAGIXQ9H6Y5 334 aa19.43■□□□□ 0.7
PNKP-203ENST00000593946 ZNF639Q9UID6 485 aa19.43■□□□□ 0.7
PNKP-203ENST00000593946 ZNF451Q9Y4E5 1061 aa19.43■□□□□ 0.7
PNKP-203ENST00000593946 NINQ8N4C6 2090 aa19.43■□□□□ 0.7
PNKP-203ENST00000593946 IGLV3-12A0A075B6K2 115 aa19.42■□□□□ 0.7
PNKP-203ENST00000593946 CCL4P13236 92 aa19.42■□□□□ 0.7
PNKP-203ENST00000593946 S1PR1P21453 382 aa19.42■□□□□ 0.7
PNKP-203ENST00000593946 GALNSP34059 522 aa19.42■□□□□ 0.7
PNKP-203ENST00000593946 RORAP35398 523 aa19.42■□□□□ 0.7
PNKP-203ENST00000593946 INSM1Q01101 510 aaPredicted RBP19.42■□□□□ 0.7
PNKP-203ENST00000593946 RHAGQ02094 409 aa19.42■□□□□ 0.7
PNKP-203ENST00000593946 CHRNB3Q05901 458 aa19.42■□□□□ 0.7
PNKP-203ENST00000593946 ELOAQ14241 798 aaKnown RBP19.42■□□□□ 0.7
PNKP-203ENST00000593946 NKAIN1Q4KMZ8 207 aa19.42■□□□□ 0.7
PNKP-203ENST00000593946 VWA2Q5GFL6 755 aa19.42■□□□□ 0.7
PNKP-203ENST00000593946 CRB2Q5IJ48 1285 aa19.42■□□□□ 0.7
PNKP-203ENST00000593946 CDC73Q6P1J9 531 aa19.42■□□□□ 0.7
PNKP-203ENST00000593946 PIP4P1Q86T03 277 aa19.42■□□□□ 0.7
PNKP-203ENST00000593946 RIT1Q92963 219 aa19.42■□□□□ 0.7
PNKP-203ENST00000593946 SLC47A1Q96FL8 570 aa19.42■□□□□ 0.7
PNKP-203ENST00000593946 OTUB1Q96FW1 271 aaPredicted RBP19.42■□□□□ 0.7
PNKP-203ENST00000593946 TMEM19Q96HH6 336 aa19.42■□□□□ 0.7
PNKP-203ENST00000593946 PYURFQ96I23 114 aa19.42■□□□□ 0.7
PNKP-203ENST00000593946 CTRCQ99895 268 aa19.42■□□□□ 0.7
PNKP-203ENST00000593946 PELOQ9BRX2 385 aaKnown RBP19.42■□□□□ 0.7
PNKP-203ENST00000593946 CHID1Q9BWS9 393 aa19.42■□□□□ 0.7
PNKP-203ENST00000593946 TGIF2Q9GZN2 237 aa19.42■□□□□ 0.7
PNKP-203ENST00000593946 TOR4AQ9NXH8 423 aa19.42■□□□□ 0.7
PNKP-203ENST00000593946 CTSFQ9UBX1 484 aa19.42■□□□□ 0.7
PNKP-203ENST00000593946 ZNF682O95780 498 aa19.42■□□□□ 0.7
PNKP-203ENST00000593946 CBX7O95931 251 aa19.42■□□□□ 0.7
PNKP-203ENST00000593946 HOXB6P17509 224 aaKnown RBP19.42■□□□□ 0.7
PNKP-203ENST00000593946 CLCN2P51788 898 aa19.42■□□□□ 0.7
PNKP-203ENST00000593946 FUT5Q11128 374 aa19.42■□□□□ 0.7
PNKP-203ENST00000593946 MINDY4Q4G0A6 757 aa19.42■□□□□ 0.7
PNKP-203ENST00000593946 CCDC157Q569K6 752 aa19.42■□□□□ 0.7
PNKP-203ENST00000593946 EXOSC6Q5RKV6 272 aaKnown RBP19.42■□□□□ 0.7
PNKP-203ENST00000593946 CDCP2Q5VXM1 449 aa19.42■□□□□ 0.7
PNKP-203ENST00000593946 HMBOX1Q6NT76 420 aa19.42■□□□□ 0.7
PNKP-203ENST00000593946 AGPAT4Q9NRZ5 378 aa19.42■□□□□ 0.7
PNKP-203ENST00000593946 PCDHGA1Q9Y5H4 931 aa19.42■□□□□ 0.7
PNKP-203ENST00000593946 TMEM247A6NEH6 219 aa19.41■□□□□ 0.7
PNKP-203ENST00000593946 TMEM229AB2RXF0 380 aa19.41■□□□□ 0.7
PNKP-203ENST00000593946 B4E171 279 aa19.41■□□□□ 0.7
PNKP-203ENST00000593946 C5orf58C9J3I9 102 aa19.41■□□□□ 0.7
PNKP-203ENST00000593946 TPST1O60507 370 aa19.41■□□□□ 0.7
PNKP-203ENST00000593946 NME6O75414 186 aaPredicted RBP19.41■□□□□ 0.7
PNKP-203ENST00000593946 FCGR1AP12314 374 aa19.41■□□□□ 0.7
PNKP-203ENST00000593946 TSPAN7P41732 249 aa19.41■□□□□ 0.7
PNKP-203ENST00000593946 EFNA3P52797 238 aa19.41■□□□□ 0.7
PNKP-203ENST00000593946 DCDP81605 110 aaKnown RBP19.41■□□□□ 0.7
PNKP-203ENST00000593946 EXOSC7Q15024 291 aaKnown RBP19.41■□□□□ 0.7
PNKP-203ENST00000593946 SYPL1Q16563 259 aa19.41■□□□□ 0.7
PNKP-203ENST00000593946 CYBRD1Q53TN4 286 aa19.41■□□□□ 0.7
PNKP-203ENST00000593946 PATL1Q86TB9 770 aaKnown RBP19.41■□□□□ 0.7
PNKP-203ENST00000593946 SLC44A2Q8IWA5 706 aaPredicted RBP19.41■□□□□ 0.7
PNKP-203ENST00000593946 SLC16A11Q8NCK7 471 aa19.41■□□□□ 0.7
PNKP-203ENST00000593946 OR10Q1Q8NGQ4 319 aa19.41■□□□□ 0.7
PNKP-203ENST00000593946 TAMM41Q96BW9 452 aa19.41■□□□□ 0.7
PNKP-203ENST00000593946 CMKLR1Q99788 373 aa19.41■□□□□ 0.7
PNKP-203ENST00000593946 ADAP2Q9NPF8 381 aa19.41■□□□□ 0.7
PNKP-203ENST00000593946 KCNE3Q9Y6H6 103 aa19.41■□□□□ 0.7
PNKP-203ENST00000593946 DUXAA6NLW8 204 aa19.4■□□□□ 0.7
PNKP-203ENST00000593946 FOXD2O60548 495 aaPredicted RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms