RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 KCNC4Q03721 635 aa12.92□□□□□ -0.34
TPM1-215ENST00000558868 STX4Q12846 297 aa12.92□□□□□ -0.34
TPM1-215ENST00000558868 EPS8Q12929 822 aa12.92□□□□□ -0.34
TPM1-215ENST00000558868 SLC13A2Q13183 592 aa12.92□□□□□ -0.34
TPM1-215ENST00000558868 DAG1Q14118 895 aa12.92□□□□□ -0.34
TPM1-215ENST00000558868 SERTAD2Q14140 314 aa12.92□□□□□ -0.34
TPM1-215ENST00000558868 GK3PQ14409 553 aa12.92□□□□□ -0.34
TPM1-215ENST00000558868 KCNAB1Q14722 419 aa12.92□□□□□ -0.34
TPM1-215ENST00000558868 MFSD12Q6NUT3 480 aa12.92□□□□□ -0.34
TPM1-215ENST00000558868 MED25Q71SY5 747 aa12.92□□□□□ -0.34
TPM1-215ENST00000558868 STK32CQ86UX6 486 aa12.92□□□□□ -0.34
TPM1-215ENST00000558868 SLC44A2Q8IWA5 706 aaPredicted RBP12.92□□□□□ -0.34
TPM1-215ENST00000558868 MARVELD2Q8N4S9 558 aa12.92□□□□□ -0.34
TPM1-215ENST00000558868 OR7G2Q8NG99 324 aa12.92□□□□□ -0.34
TPM1-215ENST00000558868 OR10Q1Q8NGQ4 319 aa12.92□□□□□ -0.34
TPM1-215ENST00000558868 PROX1Q92786 737 aa12.92□□□□□ -0.34
TPM1-215ENST00000558868 PEX11GQ96HA9 241 aa12.92□□□□□ -0.34
TPM1-215ENST00000558868 TRNT1Q96Q11 434 aaKnown RBP12.92□□□□□ -0.34
TPM1-215ENST00000558868 OR7D2Q96RA2 312 aa12.92□□□□□ -0.34
TPM1-215ENST00000558868 RBM4BQ9BQ04 359 aaKnown RBP12.92□□□□□ -0.34
TPM1-215ENST00000558868 NUDT22Q9BRQ3 303 aa12.92□□□□□ -0.34
TPM1-215ENST00000558868 RBM4Q9BWF3 364 aaKnown RBP12.92□□□□□ -0.34
TPM1-215ENST00000558868 RUBCNLQ9H714 662 aa12.92□□□□□ -0.34
TPM1-215ENST00000558868 REEP1Q9H902 201 aa12.92□□□□□ -0.34
TPM1-215ENST00000558868 CACYBPQ9HB71 228 aaKnown RBP12.92□□□□□ -0.34
TPM1-215ENST00000558868 FSCN3Q9NQT6 498 aa12.92□□□□□ -0.34
TPM1-215ENST00000558868 THSD1Q9NS62 852 aa12.92□□□□□ -0.34
TPM1-215ENST00000558868 SMPD3Q9NY59 655 aaPredicted RBP12.92□□□□□ -0.34
TPM1-215ENST00000558868 USE1Q9NZ43 259 aa12.92□□□□□ -0.34
TPM1-215ENST00000558868 TMEM9Q9P0T7 183 aa12.92□□□□□ -0.34
TPM1-215ENST00000558868 PDP2Q9P2J9 529 aa12.92□□□□□ -0.34
TPM1-215ENST00000558868 FAM32AQ9Y421 112 aaKnown RBP12.92□□□□□ -0.34
TPM1-215ENST00000558868 U3KQA8 63 aa12.92□□□□□ -0.34
TPM1-215ENST00000558868 ZFHX2Q9C0A1 2572 aaPredicted RBP12.91□□□□□ -0.34
TPM1-215ENST00000558868 PI4KAP42356 2102 aa12.91□□□□□ -0.34
TPM1-215ENST00000558868 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.91□□□□□ -0.34
TPM1-215ENST00000558868 C7orf72A4D263 438 aa12.91□□□□□ -0.34
TPM1-215ENST00000558868 MAGEA13PA6NCF6 341 aa12.91□□□□□ -0.34
TPM1-215ENST00000558868 SYNDIG1LA6NDD5 238 aa12.91□□□□□ -0.34
TPM1-215ENST00000558868 A8MU76 341 aa12.91□□□□□ -0.34
TPM1-215ENST00000558868 hCG_2039718K7EN88 272 aa12.91□□□□□ -0.34
TPM1-215ENST00000558868 EI24O14681 340 aa12.91□□□□□ -0.34
TPM1-215ENST00000558868 DSCR3O14972 297 aa12.91□□□□□ -0.34
TPM1-215ENST00000558868 KHNYNO15037 678 aaKnown RBP12.91□□□□□ -0.34
TPM1-215ENST00000558868 ADAMDEC1O15204 470 aa12.91□□□□□ -0.34
TPM1-215ENST00000558868 ZNF749O43361 778 aa12.91□□□□□ -0.34
TPM1-215ENST00000558868 MFN2O95140 757 aa12.91□□□□□ -0.34
TPM1-215ENST00000558868 MED26O95402 600 aa12.91□□□□□ -0.34
TPM1-215ENST00000558868 OPN1SWP03999 348 aa12.91□□□□□ -0.34
TPM1-215ENST00000558868 FPR1P21462 350 aa12.91□□□□□ -0.34
TPM1-215ENST00000558868 GALNSP34059 522 aa12.91□□□□□ -0.34
TPM1-215ENST00000558868 MAN2A2P49641 1150 aa12.91□□□□□ -0.34
TPM1-215ENST00000558868 CCL7P80098 99 aa12.91□□□□□ -0.34
TPM1-215ENST00000558868 IGLV3-21P80748 117 aaPredicted RBP12.91□□□□□ -0.34
TPM1-215ENST00000558868 HPCAP84074 193 aa12.91□□□□□ -0.34
TPM1-215ENST00000558868 ID2Q02363 134 aa12.91□□□□□ -0.34
TPM1-215ENST00000558868 MAP4K2Q12851 820 aa12.91□□□□□ -0.34
TPM1-215ENST00000558868 PDK3Q15120 406 aa12.91□□□□□ -0.34
TPM1-215ENST00000558868 GPAT3Q53EU6 434 aa12.91□□□□□ -0.34
TPM1-215ENST00000558868 PERM1Q5SV97 790 aa12.91□□□□□ -0.34
TPM1-215ENST00000558868 FHL5Q5TD97 284 aa12.91□□□□□ -0.34
TPM1-215ENST00000558868 SHQ1Q6PI26 577 aaKnown RBP12.91□□□□□ -0.34
TPM1-215ENST00000558868 C16orf62Q7Z3J2 963 aa12.91□□□□□ -0.34
TPM1-215ENST00000558868 ST13P4Q8IZP2 240 aaPredicted RBP12.91□□□□□ -0.34
TPM1-215ENST00000558868 TMEM52Q8NDY8 209 aa12.91□□□□□ -0.34
TPM1-215ENST00000558868 PRSS33Q8NF86 280 aa12.91□□□□□ -0.34
TPM1-215ENST00000558868 OR5D16Q8NGK9 328 aa12.91□□□□□ -0.34
TPM1-215ENST00000558868 OR51Q1Q8NH59 317 aa12.91□□□□□ -0.34
TPM1-215ENST00000558868 OR1L3Q8NH93 324 aa12.91□□□□□ -0.34
TPM1-215ENST00000558868 MAGEE2Q8TD90 523 aaPredicted RBP12.91□□□□□ -0.34
TPM1-215ENST00000558868 GIMAP5Q96F15 307 aa12.91□□□□□ -0.34
TPM1-215ENST00000558868 C16orf58Q96GQ5 468 aa12.91□□□□□ -0.34
TPM1-215ENST00000558868 RBM18Q96H35 190 aaKnown RBP12.91□□□□□ -0.34
TPM1-215ENST00000558868 C7orf34Q96L11 122 aa12.91□□□□□ -0.34
TPM1-215ENST00000558868 ZNF578Q96N58 590 aaPredicted RBP12.91□□□□□ -0.34
TPM1-215ENST00000558868 OR1F2PQ96R84 312 aa12.91□□□□□ -0.34
TPM1-215ENST00000558868 TREX2Q9BQ50 279 aaPredicted RBP12.91□□□□□ -0.34
TPM1-215ENST00000558868 GTPBP2Q9BX10 602 aaKnown RBP12.91□□□□□ -0.34
TPM1-215ENST00000558868 GIN1Q9NXP7 522 aa12.91□□□□□ -0.34
TPM1-215ENST00000558868 SEC14L3Q9UDX4 400 aa12.91□□□□□ -0.34
TPM1-215ENST00000558868 SRPK3Q9UPE1 567 aa12.91□□□□□ -0.34
TPM1-215ENST00000558868 MMACHCQ9Y4U1 282 aa12.91□□□□□ -0.34
TPM1-215ENST00000558868 PCDHGB2Q9Y5G2 931 aa12.91□□□□□ -0.34
TPM1-215ENST00000558868 ORC6Q9Y5N6 252 aa12.91□□□□□ -0.34
TPM1-215ENST00000558868 GPC6Q9Y625 555 aaPredicted RBP12.91□□□□□ -0.34
TPM1-215ENST00000558868 PATE3B3GLJ2 98 aa12.9□□□□□ -0.34
TPM1-215ENST00000558868 H3BMH7 237 aa12.9□□□□□ -0.34
TPM1-215ENST00000558868 AK1P00568 194 aa12.9□□□□□ -0.34
TPM1-215ENST00000558868 IFNW1P05000 195 aa12.9□□□□□ -0.34
TPM1-215ENST00000558868 ALOX5P09917 674 aa12.9□□□□□ -0.34
TPM1-215ENST00000558868 FOLR1P15328 257 aa12.9□□□□□ -0.34
TPM1-215ENST00000558868 DCTP40126 519 aa12.9□□□□□ -0.34
TPM1-215ENST00000558868 MPLP40238 635 aa12.9□□□□□ -0.34
TPM1-215ENST00000558868 MRPS35P82673 323 aaKnown RBP12.9□□□□□ -0.34
TPM1-215ENST00000558868 VLDLRP98155 873 aa12.9□□□□□ -0.34
TPM1-215ENST00000558868 SYPL1Q16563 259 aa12.9□□□□□ -0.34
TPM1-215ENST00000558868 PRICKLE4Q2TBC4 344 aa12.9□□□□□ -0.34
TPM1-215ENST00000558868 RFX4Q33E94 735 aa12.9□□□□□ -0.34
TPM1-215ENST00000558868 PROX2Q3B8N5 592 aa12.9□□□□□ -0.34
TPM1-215ENST00000558868 NHSL2Q5HYW2 709 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms