RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 MARCH5Q9NX47 278 aa0.24□□□□□ -2.37
COPB1-212ENST00000534771 CPSF2Q9P2I0 782 aaKnown RBP0.24□□□□□ -2.37
COPB1-212ENST00000534771 TRMT6Q9UJA5 497 aaKnown RBP0.24□□□□□ -2.37
COPB1-212ENST00000534771 ANAPC2Q9UJX6 822 aa0.24□□□□□ -2.37
COPB1-212ENST00000534771 PRPF19Q9UMS4 504 aaKnown RBP0.24□□□□□ -2.37
COPB1-212ENST00000534771 ETV7Q9Y603 341 aa0.24□□□□□ -2.37
COPB1-212ENST00000534771 TEX264Q9Y6I9 313 aa0.24□□□□□ -2.37
COPB1-212ENST00000534771 GPR98Q8WXG9 6306 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 ARPC4-TTLL3A0A0A6YYG9 625 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 A0A0B4J203 849 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 A0A0J9YXY3 114 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 hCG_1807616A0A1W2PRN6 198 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 CCDC162PA2VCL2 907 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 COLCA2A8K830 154 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 FLRT2O43155 660 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 SPAG7O75391 227 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 ANXA9O76027 345 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 PGK1P00558 417 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 GBAP04062 536 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 RETP07949 1114 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 ARL14EPLP0DKL9 152 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 TCF4P15884 667 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 GLRA1P23415 457 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 IGFBP5P24593 272 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 UCP1P25874 307 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 HOXD13P35453 343 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 UGT1A5P35504 534 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 RAB28P51157 221 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 CCR4P51679 360 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 MNAT1P51948 309 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 METAP1P53582 386 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 GEMIN4P57678 1058 aaKnown RBP0.23□□□□□ -2.37
COPB1-212ENST00000534771 RPL32P62910 135 aaKnown RBP0.23□□□□□ -2.37
COPB1-212ENST00000534771 ROR1Q01973 937 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 MFGE8Q08431 387 aaPredicted RBP0.23□□□□□ -2.37
COPB1-212ENST00000534771 P2RY14Q15391 338 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 DEFB116Q30KQ4 102 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 CRY2Q49AN0 593 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 RILPL1Q5EBL4 403 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 ZNF311Q5JNZ3 666 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 OR2B11Q5JQS5 317 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 SEL1L2Q5TEA6 688 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 C1orf189Q5VU69 101 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 FAM46CQ5VWP2 391 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 SNRNP48Q6IEG0 339 aaKnown RBP0.23□□□□□ -2.37
COPB1-212ENST00000534771 OR52W1Q6IF63 320 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 DCLRE1AQ6PJP8 1040 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 FRA10AC1Q70Z53 315 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 PHLDB2Q86SQ0 1253 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 FAM219AQ8IW50 185 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 TDHQ8IZJ6 230 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 MCOLN2Q8IZK6 566 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 ZNF444Q8N0Y2 327 aaPredicted RBP0.23□□□□□ -2.37
COPB1-212ENST00000534771 ALLCQ8N6M5 410 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 DUSP18Q8NEJ0 188 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 OR6X1Q8NH79 312 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 UBALD1Q8TB05 177 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 GOLGA5Q8TBA6 731 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 C7orf33Q8WU49 177 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 TAF4BQ92750 862 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 FRZBQ92765 325 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 SMARCD2Q92925 531 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 BIRC7Q96CA5 298 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 PCED1BQ96HM7 432 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 TSNARE1Q96NA8 513 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 HCAR1Q9BXC0 346 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 GHITMQ9H3K2 345 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 ALG9Q9H6U8 611 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 DCLRE1BQ9H816 532 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 MINDY3Q9H8M7 445 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 RAB9BQ9NP90 201 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 DNAJC11Q9NVH1 559 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 PLEK2Q9NYT0 353 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 CD274Q9NZQ7 290 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 SLC2A6Q9UGQ3 507 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 ARMCX3Q9UH62 379 aaPredicted RBP0.23□□□□□ -2.37
COPB1-212ENST00000534771 ZNF225Q9UK10 706 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 TMEM5Q9Y2B1 443 aa0.23□□□□□ -2.37
COPB1-212ENST00000534771 SAMHD1Q9Y3Z3 626 aaKnown RBP0.23□□□□□ -2.37
COPB1-212ENST00000534771 PLA2R1Q13018 1463 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 ANKRD30BQ9BXX2 1392 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 PPIAL4EA0A075B759 164 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 TRAV40A0A0B4J280 105 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 PPIAL4CA0A0B4J2A2 164 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 ANKDD1BA6NHY2 528 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 TSPY2A6NKD2 308 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 YJEFN3A6XGL0 299 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 PPIAL4DF5H284 164 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 J3QKU1 62 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 TSPAN2O60636 221 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 TBL1XO60907 577 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 ZNF254O75437 659 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 BEST1O76090 585 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 RCBTB2O95199 551 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 TGDSO95455 350 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 INSP01308 110 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 CSF2P04141 144 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 WNT2P09544 360 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 ANKRD34CP0C6C1 535 aa0.22□□□□□ -2.37
COPB1-212ENST00000534771 TSPY3P0CV98 308 aa0.22□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms