RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 GALR3O60755 368 aaPredicted RBP13.11□□□□□ -0.31
HDAC1-206ENST00000476391 HTR3BO95264 441 aa13.11□□□□□ -0.31
HDAC1-206ENST00000476391 CPSF4O95639 269 aaKnown RBP13.11□□□□□ -0.31
HDAC1-206ENST00000476391 FEN1P39748 380 aaKnown RBP13.11□□□□□ -0.31
HDAC1-206ENST00000476391 PREPP48147 710 aa13.11□□□□□ -0.31
HDAC1-206ENST00000476391 GPR143P51810 404 aa13.11□□□□□ -0.31
HDAC1-206ENST00000476391 RAP2BP61225 183 aa13.11□□□□□ -0.31
HDAC1-206ENST00000476391 SLC22A10Q63ZE4 541 aa13.11□□□□□ -0.31
HDAC1-206ENST00000476391 HAGHLQ6PII5 290 aaPredicted RBP13.11□□□□□ -0.31
HDAC1-206ENST00000476391 PGAP1Q75T13 922 aa13.11□□□□□ -0.31
HDAC1-206ENST00000476391 CTU1Q7Z7A3 348 aaKnown RBP13.11□□□□□ -0.31
HDAC1-206ENST00000476391 GPR135Q8IZ08 494 aa13.11□□□□□ -0.31
HDAC1-206ENST00000476391 SPICQ8N5J4 248 aa13.11□□□□□ -0.31
HDAC1-206ENST00000476391 BMPERQ8N8U9 685 aa13.11□□□□□ -0.31
HDAC1-206ENST00000476391 ELP5Q8TE02 316 aa13.11□□□□□ -0.31
HDAC1-206ENST00000476391 GLYATL2Q8WU03 294 aa13.11□□□□□ -0.31
HDAC1-206ENST00000476391 GATAD2BQ8WXI9 593 aa13.11□□□□□ -0.31
HDAC1-206ENST00000476391 PARK7Q99497 189 aaKnown RBP13.11□□□□□ -0.31
HDAC1-206ENST00000476391 ARHGAP9Q9BRR9 750 aa13.11□□□□□ -0.31
HDAC1-206ENST00000476391 NPDC1Q9NQX5 325 aaPredicted RBP13.11□□□□□ -0.31
HDAC1-206ENST00000476391 ELOVL2Q9NXB9 296 aa13.11□□□□□ -0.31
HDAC1-206ENST00000476391 FLRT1Q9NZU1 646 aa13.11□□□□□ -0.31
HDAC1-206ENST00000476391 RPS6KB2Q9UBS0 482 aa13.11□□□□□ -0.31
HDAC1-206ENST00000476391 CA5BQ9Y2D0 317 aa13.11□□□□□ -0.31
HDAC1-206ENST00000476391 PMS2P1A4D2B8 440 aa13.1□□□□□ -0.31
HDAC1-206ENST00000476391 AGAP14A8MT82 685 aa13.1□□□□□ -0.31
HDAC1-206ENST00000476391 NPIPB8E9PQR5 432 aa13.1□□□□□ -0.31
HDAC1-206ENST00000476391 WRBO00258 174 aa13.1□□□□□ -0.31
HDAC1-206ENST00000476391 LRRTM2O43300 516 aa13.1□□□□□ -0.31
HDAC1-206ENST00000476391 SUSD5O60279 629 aa13.1□□□□□ -0.31
HDAC1-206ENST00000476391 OPN1SWP03999 348 aa13.1□□□□□ -0.31
HDAC1-206ENST00000476391 ZNF865P0CJ78 1059 aaPredicted RBP13.1□□□□□ -0.31
HDAC1-206ENST00000476391 NPR2P20594 1047 aa13.1□□□□□ -0.31
HDAC1-206ENST00000476391 TAP2Q03519 686 aa13.1□□□□□ -0.31
HDAC1-206ENST00000476391 STX4Q12846 297 aa13.1□□□□□ -0.31
HDAC1-206ENST00000476391 DEF8Q6ZN54 512 aa13.1□□□□□ -0.31
HDAC1-206ENST00000476391 KRT78Q8N1N4 520 aa13.1□□□□□ -0.31
HDAC1-206ENST00000476391 UMODL1-AS1Q8N2C9 162 aa13.1□□□□□ -0.31
HDAC1-206ENST00000476391 STK40Q8N2I9 435 aa13.1□□□□□ -0.31
HDAC1-206ENST00000476391 HUS1BQ8NHY5 278 aa13.1□□□□□ -0.31
HDAC1-206ENST00000476391 CSGALNACT1Q8TDX6 532 aa13.1□□□□□ -0.31
HDAC1-206ENST00000476391 NARS2Q96I59 477 aaKnown RBP13.1□□□□□ -0.31
HDAC1-206ENST00000476391 SLC25A32Q9H2D1 315 aa13.1□□□□□ -0.31
HDAC1-206ENST00000476391 FGF20Q9NP95 211 aaPredicted RBP13.1□□□□□ -0.31
HDAC1-206ENST00000476391 MRPS18AQ9NVS2 196 aaKnown RBP13.1□□□□□ -0.31
HDAC1-206ENST00000476391 MED11Q9P086 117 aa13.1□□□□□ -0.31
HDAC1-206ENST00000476391 MYEF2Q9P2K5 600 aaKnown RBP13.1□□□□□ -0.31
HDAC1-206ENST00000476391 PCDHB7Q9Y5E2 793 aa13.1□□□□□ -0.31
HDAC1-206ENST00000476391 ENPP4Q9Y6X5 453 aa13.1□□□□□ -0.31
HDAC1-206ENST00000476391 MCM3APO60318 1980 aa13.1□□□□□ -0.31
HDAC1-206ENST00000476391 HMSDA8MTL9 139 aa13.1□□□□□ -0.31
HDAC1-206ENST00000476391 TEX46H3BTG2 121 aa13.1□□□□□ -0.31
HDAC1-206ENST00000476391 GABRPO00591 440 aa13.1□□□□□ -0.31
HDAC1-206ENST00000476391 IRAK2O43187 625 aa13.1□□□□□ -0.31
HDAC1-206ENST00000476391 AQP8O94778 261 aa13.1□□□□□ -0.31
HDAC1-206ENST00000476391 SOX30O94993 753 aa13.1□□□□□ -0.31
HDAC1-206ENST00000476391 PDYNP01213 254 aa13.1□□□□□ -0.31
HDAC1-206ENST00000476391 ZNF806P0C7X5 589 aa13.1□□□□□ -0.31
HDAC1-206ENST00000476391 EPB42P16452 691 aa13.1□□□□□ -0.31
HDAC1-206ENST00000476391 GALP22466 123 aa13.1□□□□□ -0.31
HDAC1-206ENST00000476391 PSMD4P55036 377 aaKnown RBP13.1□□□□□ -0.31
HDAC1-206ENST00000476391 CRHR2Q13324 411 aa13.1□□□□□ -0.31
HDAC1-206ENST00000476391 UBXN2BQ14CS0 331 aa13.1□□□□□ -0.31
HDAC1-206ENST00000476391 LY6KQ17RY6 165 aa13.1□□□□□ -0.31
HDAC1-206ENST00000476391 ZSWIM7Q19AV6 140 aa13.1□□□□□ -0.31
HDAC1-206ENST00000476391 PAN3Q58A45 887 aaKnown RBP13.1□□□□□ -0.31
HDAC1-206ENST00000476391 PRAMEF19Q5SWL8 479 aa13.1□□□□□ -0.31
HDAC1-206ENST00000476391 HBMQ6B0K9 141 aa13.1□□□□□ -0.31
HDAC1-206ENST00000476391 IKBIPQ70UQ0 350 aa13.1□□□□□ -0.31
HDAC1-206ENST00000476391 LRRTM3Q86VH5 581 aa13.1□□□□□ -0.31
HDAC1-206ENST00000476391 DMRTA2Q96SC8 542 aa13.1□□□□□ -0.31
HDAC1-206ENST00000476391 SARS2Q9NP81 518 aaKnown RBP13.1□□□□□ -0.31
HDAC1-206ENST00000476391 SDHAF3Q9NRP4 125 aa13.1□□□□□ -0.31
HDAC1-206ENST00000476391 NLGN3Q9NZ94 848 aa13.1□□□□□ -0.31
HDAC1-206ENST00000476391 WWOXQ9NZC7 414 aa13.1□□□□□ -0.31
HDAC1-206ENST00000476391 PIPOXQ9P0Z9 390 aa13.1□□□□□ -0.31
HDAC1-206ENST00000476391 GJD2Q9UKL4 321 aa13.1□□□□□ -0.31
HDAC1-206ENST00000476391 MKL2Q9ULH7 1088 aa13.1□□□□□ -0.31
HDAC1-206ENST00000476391 DHRS7Q9Y394 339 aa13.1□□□□□ -0.31
HDAC1-206ENST00000476391 OARD1Q9Y530 152 aa13.1□□□□□ -0.31
HDAC1-206ENST00000476391 ONECUT3O60422 494 aaPredicted RBP13.09□□□□□ -0.31
HDAC1-206ENST00000476391 ITGA10O75578 1167 aa13.09□□□□□ -0.31
HDAC1-206ENST00000476391 ATG12O94817 140 aa13.09□□□□□ -0.31
HDAC1-206ENST00000476391 CLDN9O95484 217 aa13.09□□□□□ -0.31
HDAC1-206ENST00000476391 GUCA1CO95843 209 aa13.09□□□□□ -0.31
HDAC1-206ENST00000476391 PIRTP0C851 137 aa13.09□□□□□ -0.31
HDAC1-206ENST00000476391 PSMA3P25788 255 aa13.09□□□□□ -0.31
HDAC1-206ENST00000476391 RGS4P49798 205 aa13.09□□□□□ -0.31
HDAC1-206ENST00000476391 CCR6P51684 374 aa13.09□□□□□ -0.31
HDAC1-206ENST00000476391 XKP51811 444 aa13.09□□□□□ -0.31
HDAC1-206ENST00000476391 RAB40BQ12829 278 aa13.09□□□□□ -0.31
HDAC1-206ENST00000476391 ZNF124Q15973 351 aa13.09□□□□□ -0.31
HDAC1-206ENST00000476391 ALKAL1Q6UXT8 129 aa13.09□□□□□ -0.31
HDAC1-206ENST00000476391 BCDIN3DQ7Z5W3 292 aaKnown RBP13.09□□□□□ -0.31
HDAC1-206ENST00000476391 TSPAN33Q86UF1 283 aa13.09□□□□□ -0.31
HDAC1-206ENST00000476391 SIAH3Q8IW03 269 aa13.09□□□□□ -0.31
HDAC1-206ENST00000476391 CLECL1Q8IZS7 167 aa13.09□□□□□ -0.31
HDAC1-206ENST00000476391 PXT1Q8NFP0 134 aa13.09□□□□□ -0.31
HDAC1-206ENST00000476391 UBTD2Q8WUN7 234 aa13.09□□□□□ -0.31
HDAC1-206ENST00000476391 SELENOMQ8WWX9 145 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms