RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 HNF4AP41235 474 aa5.74□□□□□ -1.49
HDAC3-206ENST00000471968 KHKP50053 298 aa5.74□□□□□ -1.49
HDAC3-206ENST00000471968 ZNF140P52738 457 aaPredicted RBP5.74□□□□□ -1.49
HDAC3-206ENST00000471968 SUCLG1P53597 346 aaKnown RBP5.74□□□□□ -1.49
HDAC3-206ENST00000471968 HSD17B7P56937 341 aa5.74□□□□□ -1.49
HDAC3-206ENST00000471968 EEFSECP57772 596 aaKnown RBP5.74□□□□□ -1.49
HDAC3-206ENST00000471968 RAB8AP61006 207 aa5.74□□□□□ -1.49
HDAC3-206ENST00000471968 BCL2A1Q16548 175 aa5.74□□□□□ -1.49
HDAC3-206ENST00000471968 DEPDC1Q5TB30 811 aa5.74□□□□□ -1.49
HDAC3-206ENST00000471968 NIPAL1Q6NVV3 410 aa5.74□□□□□ -1.49
HDAC3-206ENST00000471968 FIP1L1Q6UN15 594 aaKnown RBP5.74□□□□□ -1.49
HDAC3-206ENST00000471968 CES3Q6UWW8 571 aa5.74□□□□□ -1.49
HDAC3-206ENST00000471968 PACS1Q6VY07 963 aa5.74□□□□□ -1.49
HDAC3-206ENST00000471968 BHLHA15Q7RTS1 189 aaPredicted RBP5.74□□□□□ -1.49
HDAC3-206ENST00000471968 ZNF786Q8N393 782 aa5.74□□□□□ -1.49
HDAC3-206ENST00000471968 TMEM52Q8NDY8 209 aa5.74□□□□□ -1.49
HDAC3-206ENST00000471968 OR9A1PQ8NGU1 263 aa5.74□□□□□ -1.49
HDAC3-206ENST00000471968 ZNF721Q8TF20 911 aa5.74□□□□□ -1.49
HDAC3-206ENST00000471968 ITPKCQ96DU7 683 aa5.74□□□□□ -1.49
HDAC3-206ENST00000471968 GMPPAQ96IJ6 420 aaPredicted RBP5.74□□□□□ -1.49
HDAC3-206ENST00000471968 DNAJC1Q96KC8 554 aaKnown RBP5.74□□□□□ -1.49
HDAC3-206ENST00000471968 TIGD1Q96MW7 591 aa5.74□□□□□ -1.49
HDAC3-206ENST00000471968 PRRG4Q9BZD6 226 aa5.74□□□□□ -1.49
HDAC3-206ENST00000471968 RAB1BQ9H0U4 201 aa5.74□□□□□ -1.49
HDAC3-206ENST00000471968 DENND2DQ9H6A0 471 aaPredicted RBP5.74□□□□□ -1.49
HDAC3-206ENST00000471968 MYNNQ9NPC7 610 aa5.74□□□□□ -1.49
HDAC3-206ENST00000471968 TMEM184CQ9NVA4 438 aa5.74□□□□□ -1.49
HDAC3-206ENST00000471968 UTS2RQ9UKP6 389 aa5.74□□□□□ -1.49
HDAC3-206ENST00000471968 NUP50Q9UKX7 468 aa5.74□□□□□ -1.49
HDAC3-206ENST00000471968 MYO6Q9UM54 1294 aa5.74□□□□□ -1.49
HDAC3-206ENST00000471968 R3HDM2Q9Y2K5 976 aaKnown RBP5.74□□□□□ -1.49
HDAC3-206ENST00000471968 TMEM191CA6NGB0 347 aa5.73□□□□□ -1.49
HDAC3-206ENST00000471968 HOXA3O43365 443 aaPredicted RBP5.73□□□□□ -1.49
HDAC3-206ENST00000471968 CBR3O75828 277 aa5.73□□□□□ -1.49
HDAC3-206ENST00000471968 CRTAMO95727 393 aa5.73□□□□□ -1.49
HDAC3-206ENST00000471968 AGTP01019 485 aa5.73□□□□□ -1.49
HDAC3-206ENST00000471968 SFTPBP07988 381 aa5.73□□□□□ -1.49
HDAC3-206ENST00000471968 CD44P16070 742 aaKnown RBP5.73□□□□□ -1.49
HDAC3-206ENST00000471968 PTAFRP25105 342 aa5.73□□□□□ -1.49
HDAC3-206ENST00000471968 CD68P34810 354 aaPredicted RBP5.73□□□□□ -1.49
HDAC3-206ENST00000471968 SLC6A8P48029 635 aa5.73□□□□□ -1.49
HDAC3-206ENST00000471968 ZNF83P51522 516 aa5.73□□□□□ -1.49
HDAC3-206ENST00000471968 NDUFA8P51970 172 aa5.73□□□□□ -1.49
HDAC3-206ENST00000471968 PNOCQ13519 176 aa5.73□□□□□ -1.49
HDAC3-206ENST00000471968 SEMA3AQ14563 771 aa5.73□□□□□ -1.49
HDAC3-206ENST00000471968 ITIH4Q14624 930 aa5.73□□□□□ -1.49
HDAC3-206ENST00000471968 TMED2Q15363 201 aa5.73□□□□□ -1.49
HDAC3-206ENST00000471968 BBS9Q3SYG4 887 aa5.73□□□□□ -1.49
HDAC3-206ENST00000471968 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.73□□□□□ -1.49
HDAC3-206ENST00000471968 ISM2Q6H9L7 571 aa5.73□□□□□ -1.49
HDAC3-206ENST00000471968 DPY19L2P1Q6NXN4 242 aa5.73□□□□□ -1.49
HDAC3-206ENST00000471968 LCTLQ6UWM7 567 aa5.73□□□□□ -1.49
HDAC3-206ENST00000471968 CARM1Q86X55 608 aa5.73□□□□□ -1.49
HDAC3-206ENST00000471968 OR4N5Q8IXE1 308 aa5.73□□□□□ -1.49
HDAC3-206ENST00000471968 MCOLN2Q8IZK6 566 aa5.73□□□□□ -1.49
HDAC3-206ENST00000471968 KRT222Q8N1A0 295 aa5.73□□□□□ -1.49
HDAC3-206ENST00000471968 FAM47BQ8NA70 645 aa5.73□□□□□ -1.49
HDAC3-206ENST00000471968 LINC01006Q8NI28 216 aa5.73□□□□□ -1.49
HDAC3-206ENST00000471968 OXNAD1Q96HP4 312 aaPredicted RBP5.73□□□□□ -1.49
HDAC3-206ENST00000471968 DHTKD1Q96HY7 919 aaPredicted RBP5.73□□□□□ -1.49
HDAC3-206ENST00000471968 FAR2Q96K12 515 aa5.73□□□□□ -1.49
HDAC3-206ENST00000471968 FOPNLQ96NB1 174 aa5.73□□□□□ -1.49
HDAC3-206ENST00000471968 USB1Q9BQ65 265 aaKnown RBP5.73□□□□□ -1.49
HDAC3-206ENST00000471968 STMN4Q9H169 189 aaPredicted RBP5.73□□□□□ -1.49
HDAC3-206ENST00000471968 METTL7AQ9H8H3 244 aa5.73□□□□□ -1.49
HDAC3-206ENST00000471968 PARVAQ9NVD7 372 aa5.73□□□□□ -1.49
HDAC3-206ENST00000471968 VTI1BQ9UEU0 232 aa5.73□□□□□ -1.49
HDAC3-206ENST00000471968 FBXO9Q9UK97 447 aaPredicted RBP5.73□□□□□ -1.49
HDAC3-206ENST00000471968 TET2Q6N021 2002 aaPredicted RBP5.73□□□□□ -1.49
HDAC3-206ENST00000471968 CAPN14A8MX76 684 aa5.72□□□□□ -1.49
HDAC3-206ENST00000471968 PLPP2O43688 288 aa5.72□□□□□ -1.49
HDAC3-206ENST00000471968 LYZL6O75951 148 aa5.72□□□□□ -1.49
HDAC3-206ENST00000471968 ANPEPP15144 967 aa5.72□□□□□ -1.49
HDAC3-206ENST00000471968 CMA1P23946 247 aa5.72□□□□□ -1.49
HDAC3-206ENST00000471968 GPR6P46095 362 aaPredicted RBP5.72□□□□□ -1.49
HDAC3-206ENST00000471968 IDH3GP51553 393 aaPredicted RBP5.72□□□□□ -1.49
HDAC3-206ENST00000471968 RPP38P78345 283 aaKnown RBP5.72□□□□□ -1.49
HDAC3-206ENST00000471968 MYBPC1Q00872 1141 aa5.72□□□□□ -1.49
HDAC3-206ENST00000471968 IL1RL1Q01638 556 aa5.72□□□□□ -1.49
HDAC3-206ENST00000471968 STX4Q12846 297 aa5.72□□□□□ -1.49
HDAC3-206ENST00000471968 ITGADQ13349 1161 aa5.72□□□□□ -1.49
HDAC3-206ENST00000471968 DPYSL3Q14195 570 aa5.72□□□□□ -1.49
HDAC3-206ENST00000471968 SETDB1Q15047 1291 aa5.72□□□□□ -1.49
HDAC3-206ENST00000471968 SGCBQ16585 318 aa5.72□□□□□ -1.49
HDAC3-206ENST00000471968 ANKRD20A4Q4UJ75 823 aa5.72□□□□□ -1.49
HDAC3-206ENST00000471968 TEX44Q53QW1 395 aa5.72□□□□□ -1.49
HDAC3-206ENST00000471968 ARMCX4Q5H9R4 360 aa5.72□□□□□ -1.49
HDAC3-206ENST00000471968 ANKRD20A2Q5SQ80 823 aa5.72□□□□□ -1.49
HDAC3-206ENST00000471968 C6orf163Q5TEZ5 329 aa5.72□□□□□ -1.49
HDAC3-206ENST00000471968 ANKRD20A1Q5TYW2 823 aa5.72□□□□□ -1.49
HDAC3-206ENST00000471968 KLHDC7AQ5VTJ3 777 aa5.72□□□□□ -1.49
HDAC3-206ENST00000471968 ANKRD20A3Q5VUR7 823 aa5.72□□□□□ -1.49
HDAC3-206ENST00000471968 ACSM5Q6NUN0 579 aa5.72□□□□□ -1.49
HDAC3-206ENST00000471968 PGBD2Q6P3X8 592 aa5.72□□□□□ -1.49
HDAC3-206ENST00000471968 RNF144BQ7Z419 303 aa5.72□□□□□ -1.49
HDAC3-206ENST00000471968 JAZF1Q86VZ6 243 aa5.72□□□□□ -1.49
HDAC3-206ENST00000471968 TAGAPQ8N103 731 aa5.72□□□□□ -1.49
HDAC3-206ENST00000471968 MFSD9Q8NBP5 474 aa5.72□□□□□ -1.49
HDAC3-206ENST00000471968 Q8NFD4 153 aa5.72□□□□□ -1.49
HDAC3-206ENST00000471968 UTP15Q8TED0 518 aaKnown RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms