RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 GFM2Q969S9 779 aaKnown RBP11.91□□□□□ -0.5
COL5A1-206ENST00000465877 ADIPOR1Q96A54 375 aa11.91□□□□□ -0.5
COL5A1-206ENST00000465877 ZNF764Q96H86 408 aaPredicted RBP11.91□□□□□ -0.5
COL5A1-206ENST00000465877 SGCZQ96LD1 299 aa11.91□□□□□ -0.5
COL5A1-206ENST00000465877 PPP3R2Q96LZ3 170 aa11.91□□□□□ -0.5
COL5A1-206ENST00000465877 C3orf30Q96M34 536 aa11.91□□□□□ -0.5
COL5A1-206ENST00000465877 TSSK3Q96PN8 268 aa11.91□□□□□ -0.5
COL5A1-206ENST00000465877 BBS4Q96RK4 519 aa11.91□□□□□ -0.5
COL5A1-206ENST00000465877 SORT1Q99523 831 aa11.91□□□□□ -0.5
COL5A1-206ENST00000465877 PAIP2Q9BPZ3 127 aaKnown RBP11.91□□□□□ -0.5
COL5A1-206ENST00000465877 ITPAQ9BY32 194 aa11.91□□□□□ -0.5
COL5A1-206ENST00000465877 C20orf27Q9GZN8 174 aa11.91□□□□□ -0.5
COL5A1-206ENST00000465877 ZNF395Q9H8N7 513 aaPredicted RBP11.91□□□□□ -0.5
COL5A1-206ENST00000465877 DEPPQ9NTK1 212 aa11.91□□□□□ -0.5
COL5A1-206ENST00000465877 RYDENQ9NUL5 291 aaKnown RBP11.91□□□□□ -0.5
COL5A1-206ENST00000465877 ARGLU1Q9NWB6 273 aaPredicted RBP11.91□□□□□ -0.5
COL5A1-206ENST00000465877 SEC14L3Q9UDX4 400 aa11.91□□□□□ -0.5
COL5A1-206ENST00000465877 BCAP29Q9UHQ4 241 aa11.91□□□□□ -0.5
COL5A1-206ENST00000465877 CFL2Q9Y281 166 aa11.91□□□□□ -0.5
COL5A1-206ENST00000465877 RAP2CQ9Y3L5 183 aa11.91□□□□□ -0.5
COL5A1-206ENST00000465877 HECTD1Q9ULT8 2610 aa11.91□□□□□ -0.5
COL5A1-206ENST00000465877 DOPEY1Q5JWR5 2465 aa11.91□□□□□ -0.5
COL5A1-206ENST00000465877 MYO1GB0I1T2 1018 aa11.9□□□□□ -0.5
COL5A1-206ENST00000465877 G3V3Y1 287 aa11.9□□□□□ -0.5
COL5A1-206ENST00000465877 KLRC4-KLRK1H3BQV0 150 aa11.9□□□□□ -0.5
COL5A1-206ENST00000465877 TFECO14948 347 aaPredicted RBP11.9□□□□□ -0.5
COL5A1-206ENST00000465877 SNUPNO95149 360 aaKnown RBP11.9□□□□□ -0.5
COL5A1-206ENST00000465877 UNC5CO95185 931 aa11.9□□□□□ -0.5
COL5A1-206ENST00000465877 LRATO95237 230 aa11.9□□□□□ -0.5
COL5A1-206ENST00000465877 FBXO45P0C2W1 286 aa11.9□□□□□ -0.5
COL5A1-206ENST00000465877 CCL3P10147 92 aa11.9□□□□□ -0.5
COL5A1-206ENST00000465877 MAPK1P28482 360 aa11.9□□□□□ -0.5
COL5A1-206ENST00000465877 RFC3P40938 356 aa11.9□□□□□ -0.5
COL5A1-206ENST00000465877 SLC1A6P48664 564 aa11.9□□□□□ -0.5
COL5A1-206ENST00000465877 TMED10P49755 219 aaKnown RBP11.9□□□□□ -0.5
COL5A1-206ENST00000465877 NCBP2P52298 156 aaKnown RBP eCLIP11.9□□□□□ -0.5
COL5A1-206ENST00000465877 WDR4P57081 412 aaKnown RBP11.9□□□□□ -0.5
COL5A1-206ENST00000465877 KCNK10P57789 538 aa11.9□□□□□ -0.5
COL5A1-206ENST00000465877 BST1Q10588 318 aa11.9□□□□□ -0.5
COL5A1-206ENST00000465877 RPS6KA2Q15349 733 aa11.9□□□□□ -0.5
COL5A1-206ENST00000465877 NTRK2Q16620 822 aa11.9□□□□□ -0.5
COL5A1-206ENST00000465877 ZNF791Q3KP31 576 aaPredicted RBP11.9□□□□□ -0.5
COL5A1-206ENST00000465877 TRMT12Q53H54 448 aaKnown RBP11.9□□□□□ -0.5
COL5A1-206ENST00000465877 FHL5Q5TD97 284 aa11.9□□□□□ -0.5
COL5A1-206ENST00000465877 GFRALQ6UXV0 394 aa11.9□□□□□ -0.5
COL5A1-206ENST00000465877 SIAH3Q8IW03 269 aa11.9□□□□□ -0.5
COL5A1-206ENST00000465877 FAM13CQ8NE31 585 aa11.9□□□□□ -0.5
COL5A1-206ENST00000465877 C17orf47Q8NEP4 570 aa11.9□□□□□ -0.5
COL5A1-206ENST00000465877 PRR7Q8TB68 274 aa11.9□□□□□ -0.5
COL5A1-206ENST00000465877 KAT2AQ92830 837 aa11.9□□□□□ -0.5
COL5A1-206ENST00000465877 TP53INP1Q96A56 240 aa11.9□□□□□ -0.5
COL5A1-206ENST00000465877 ERP27Q96DN0 273 aa11.9□□□□□ -0.5
COL5A1-206ENST00000465877 GPR137Q96N19 417 aa11.9□□□□□ -0.5
COL5A1-206ENST00000465877 C1orf50Q9BV19 199 aa11.9□□□□□ -0.5
COL5A1-206ENST00000465877 NXF5Q9H1B4 397 aaKnown RBP11.9□□□□□ -0.5
COL5A1-206ENST00000465877 ANKRA2Q9H9E1 313 aa11.9□□□□□ -0.5
COL5A1-206ENST00000465877 SACM1LQ9NTJ5 587 aa11.9□□□□□ -0.5
COL5A1-206ENST00000465877 USP9YO00507 2555 aaPredicted RBP11.9□□□□□ -0.5
COL5A1-206ENST00000465877 NBPF19A0A087WUL8 3843 aa11.9□□□□□ -0.5
COL5A1-206ENST00000465877 PINLYPA6NC86 204 aa11.89□□□□□ -0.51
COL5A1-206ENST00000465877 PDPK1O15530 556 aa11.89□□□□□ -0.51
COL5A1-206ENST00000465877 PEX11AO75192 247 aa11.89□□□□□ -0.51
COL5A1-206ENST00000465877 SLITRK5O94991 958 aa11.89□□□□□ -0.51
COL5A1-206ENST00000465877 AGFG2O95081 481 aa11.89□□□□□ -0.51
COL5A1-206ENST00000465877 P04436 131 aa11.89□□□□□ -0.51
COL5A1-206ENST00000465877 BCKDHAP12694 445 aa11.89□□□□□ -0.51
COL5A1-206ENST00000465877 H2AFXP16104 143 aaPredicted RBP11.89□□□□□ -0.51
COL5A1-206ENST00000465877 MPIP34949 423 aa11.89□□□□□ -0.51
COL5A1-206ENST00000465877 HPCAL1P37235 193 aa11.89□□□□□ -0.51
COL5A1-206ENST00000465877 MC3RP41968 323 aa11.89□□□□□ -0.51
COL5A1-206ENST00000465877 ASMTP46597 345 aa11.89□□□□□ -0.51
COL5A1-206ENST00000465877 SLC18A1P54219 525 aa11.89□□□□□ -0.51
COL5A1-206ENST00000465877 NRG3P56975 720 aa11.89□□□□□ -0.51
COL5A1-206ENST00000465877 STX3Q13277 289 aa11.89□□□□□ -0.51
COL5A1-206ENST00000465877 PDE7AQ13946 482 aa11.89□□□□□ -0.51
COL5A1-206ENST00000465877 PTGR1Q14914 329 aa11.89□□□□□ -0.51
COL5A1-206ENST00000465877 ZNF385BQ569K4 471 aa11.89□□□□□ -0.51
COL5A1-206ENST00000465877 RNFT1Q5M7Z0 435 aa11.89□□□□□ -0.51
COL5A1-206ENST00000465877 AGBL2Q5U5Z8 902 aa11.89□□□□□ -0.51
COL5A1-206ENST00000465877 ANKRD26P1Q6NSI1 321 aa11.89□□□□□ -0.51
COL5A1-206ENST00000465877 TMEM107Q6UX40 140 aa11.89□□□□□ -0.51
COL5A1-206ENST00000465877 GK5Q6ZS86 529 aa11.89□□□□□ -0.51
COL5A1-206ENST00000465877 PRR22Q8IZ63 422 aa11.89□□□□□ -0.51
COL5A1-206ENST00000465877 KIRREL3Q8IZU9 778 aa11.89□□□□□ -0.51
COL5A1-206ENST00000465877 FBXW8Q8N3Y1 598 aa11.89□□□□□ -0.51
COL5A1-206ENST00000465877 LIX1Q8N485 282 aa11.89□□□□□ -0.51
COL5A1-206ENST00000465877 FNDC5Q8NAU1 212 aa11.89□□□□□ -0.51
COL5A1-206ENST00000465877 ZFP62Q8NB50 900 aaPredicted RBP11.89□□□□□ -0.51
COL5A1-206ENST00000465877 OR2M7Q8NG81 312 aa11.89□□□□□ -0.51
COL5A1-206ENST00000465877 OR7G2Q8NG99 324 aa11.89□□□□□ -0.51
COL5A1-206ENST00000465877 OR10G3Q8NGC4 313 aa11.89□□□□□ -0.51
COL5A1-206ENST00000465877 PAQR8Q8TEZ7 354 aa11.89□□□□□ -0.51
COL5A1-206ENST00000465877 GLIPR2Q9H4G4 154 aa11.89□□□□□ -0.51
COL5A1-206ENST00000465877 REEP4Q9H6H4 257 aa11.89□□□□□ -0.51
COL5A1-206ENST00000465877 SH2D2AQ9NP31 389 aa11.89□□□□□ -0.51
COL5A1-206ENST00000465877 NKIRAS1Q9NYS0 192 aa11.89□□□□□ -0.51
COL5A1-206ENST00000465877 TAS2R7Q9NYW3 318 aa11.89□□□□□ -0.51
COL5A1-206ENST00000465877 PRODH2Q9UF12 536 aa11.89□□□□□ -0.51
COL5A1-206ENST00000465877 HAO1Q9UJM8 370 aa11.89□□□□□ -0.51
COL5A1-206ENST00000465877 OSGIN2Q9Y236 505 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms