RNA–Protein interactions for RNA: ENST00000453121.1

NEGR1-IT1-201, NEGR1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene NEGR1-IT1, Length 534 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEGR1-IT1-201ENST00000453121 CDK16Q00536 496 aa3.6□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 GBE1Q04446 702 aa3.6□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 YWHAHQ04917 246 aaPredicted RBP3.6□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 NME3Q13232 169 aa3.6□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 NAB1Q13506 487 aa3.6□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 SCARB2Q14108 478 aa3.6□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 FASTKD3Q14CZ7 662 aaKnown RBP3.6□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 PAFAH1B3Q15102 231 aaKnown RBP3.6□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 PDK1Q15118 436 aa3.6□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 CA9Q16790 459 aa3.6□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 LGSNQ5TDP6 509 aa3.6□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 CCDC121Q6ZUS5 278 aa3.6□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 PAQR9Q6ZVX9 377 aa3.6□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 BNIPLQ7Z465 357 aa3.6□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 ZER1Q7Z7L7 766 aa3.6□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 FAM131BQ86XD5 332 aa3.6□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 ECHDC2Q86YB7 292 aa3.6□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 PLD3Q8IV08 490 aa3.6□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 LINC00346Q8IVM7 164 aa3.6□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 ZNF619Q8N2I2 560 aa3.6□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 CCDC197Q8NCU1 140 aa3.6□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 MCUQ8NE86 351 aa3.6□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 IPMKQ8NFU5 416 aa3.6□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 CCDC110Q8TBZ0 833 aa3.6□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 CD99L2Q8TCZ2 262 aa3.6□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 CKAP2Q8WWK9 683 aa3.6□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 HTR3CQ8WXA8 447 aa3.6□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 NT5C3BQ969T7 300 aa3.6□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 SLC22A18Q96BI1 424 aa3.6□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 PGAP3Q96FM1 320 aaPredicted RBP3.6□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 CABS1Q96KC9 395 aa3.6□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 CNDP1Q96KN2 507 aa3.6□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 MAGEB18Q96M61 343 aa3.6□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 SPATA13Q96N96 652 aa3.6□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 OLFM3Q96PB7 478 aa3.6□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 RBM14Q96PK6 669 aaKnown RBP3.6□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 TGS1Q96RS0 853 aaKnown RBP3.6□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 CYTH2Q99418 400 aa3.6□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 TEX12Q9BXU0 123 aa3.6□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 FTHL17Q9BXU8 183 aa3.6□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 TRABDQ9H4I3 376 aa3.6□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 C10orf88Q9H8K7 445 aa3.6□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 CSNK1G1Q9HCP0 422 aa3.6□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 XAB2Q9HCS7 855 aaKnown RBP3.6□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 SLC52A3Q9NQ40 469 aa3.6□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 RGS18Q9NS28 235 aa3.6□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 ADPRHL2Q9NX46 363 aa3.6□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 NSMCE4AQ9NXX6 385 aa3.6□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 COX16Q9P0S2 106 aa3.6□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 CHMP2BQ9UQN3 213 aa3.6□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 TEX264Q9Y6I9 313 aa3.6□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 TCRBV9S1A1TA0A576 114 aa3.59□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 MED19A0JLT2 244 aaPredicted RBP3.59□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 OR6C76A6NM76 312 aa3.59□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 YJEFN3A6XGL0 299 aa3.59□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 ERI2A8K979 691 aaKnown RBP3.59□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 TCP11X1B4DZS4 312 aa3.59□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 HHLA1C9JL84 531 aa3.59□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 E7ENQ6 273 aa3.59□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 H0Y626 953 aa3.59□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 AP3B1O00203 1094 aa3.59□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 RNF103O00237 685 aa3.59□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 TRDMT1O14717 391 aaKnown RBP3.59□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 TM9SF1O15321 606 aa3.59□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 ZBTB14O43829 449 aa3.59□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 BANF1O75531 89 aa3.59□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 GAS8-AS1O95177 125 aa3.59□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 PGM3O95394 542 aa3.59□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 APOEP02649 317 aa3.59□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 APRTP07741 180 aa3.59□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 LIFP15018 202 aa3.59□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 ZNF24P17028 368 aa3.59□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 ERCC2P18074 760 aa3.59□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 SAT1P21673 171 aa3.59□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 CA4P22748 312 aa3.59□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 KRTAP5-9P26371 169 aa3.59□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 GCAP28676 217 aa3.59□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 SSTR1P30872 391 aa3.59□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 GABRA5P31644 462 aa3.59□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 EIF2DP41214 584 aaKnown RBP3.59□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 MAGEA9P43362 315 aa3.59□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 BRCC3P46736 316 aa3.59□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 HCAR3P49019 387 aa3.59□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 SERPINB9P50453 376 aa3.59□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 PRMT2P55345 433 aa3.59□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 GPX6P59796 221 aa3.59□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 RPS18P62269 152 aaKnown RBP3.59□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 IL1RL1Q01638 556 aa3.59□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 PPARDQ03181 441 aa3.59□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 AP1B1Q10567 949 aa3.59□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 DPYSQ14117 519 aa3.59□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 PRPSAP1Q14558 356 aa3.59□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 EFTUD2Q15029 972 aaKnown RBP eCLIP3.59□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 PDK4Q16654 411 aa3.59□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 MRGPRG-AS1Q2M3A8 158 aa3.59□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 DEFB115Q30KQ5 88 aa3.59□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 BRMS1LQ5PSV4 323 aa3.59□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 ANKRD20A2Q5SQ80 823 aa3.59□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 LCE1EQ5T753 118 aa3.59□□□□□ -1.83
NEGR1-IT1-201ENST00000453121 GRTP1Q5TC63 336 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms