RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 FAM208AQ9UK61 1670 aaKnown RBP11.49□□□□□ -0.57
UBR4-205ENST00000417040 NFAT5O94916 1531 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 DNAJB5O75953 348 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 PRKXP51817 358 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 INCA1Q0VD86 236 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 DOC2AQ14183 400 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 MICAQ29983 383 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 STEAP4Q687X5 459 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 GSG1LQ6UXU4 331 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 ZNF709Q8N972 641 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 B3GNT7Q8NFL0 401 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 ARNTL2Q8WYA1 636 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.49□□□□□ -0.57
UBR4-205ENST00000417040 KLHL9Q9P2J3 617 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 CD300AQ9UGN4 299 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 FKTNO75072 461 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 LEFTY1O75610 366 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 PAK4O96013 591 aaPredicted RBP11.49□□□□□ -0.57
UBR4-205ENST00000417040 PRKCZQ05513 592 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 SNTA1Q13424 505 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 MBTPS1Q14703 1052 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 BCL7AQ4VC05 210 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 LETMD1Q6P1Q0 360 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 LEG1Q6P5S2 330 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 SPRYD4Q8WW59 207 aaPredicted RBP11.49□□□□□ -0.57
UBR4-205ENST00000417040 TMEM125Q96AQ2 219 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 MKS1Q9NXB0 559 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 USP22Q9UPT9 525 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 A0A0G2JMP0 313 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 A0A0U1RQK1 487 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 K7ERQ8 282 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 M0R3H8 397 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 COCHO43405 550 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 UCHL1P09936 223 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 C1GALT1C1LP0DN25 315 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 PITPNBP48739 271 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 TGM4P49221 684 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 PLGLB1Q02325 96 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 BTN1A1Q13410 526 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 SQSTM1Q13501 440 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 TRAM1Q15629 374 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 ARHGAP40Q5TG30 622 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 FAM86B1Q8N7N1 296 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 OR4M2Q8NGB6 313 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 OR4K14Q8NGD5 310 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 ACTR6Q9GZN1 396 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 XYLT2Q9H1B5 865 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 ENY2Q9NPA8 101 aa11.49□□□□□ -0.57
UBR4-205ENST00000417040 MYH2Q9UKX2 1941 aa11.48□□□□□ -0.57
UBR4-205ENST00000417040 HSD17B1P14061 328 aa11.48□□□□□ -0.57
UBR4-205ENST00000417040 FGL2Q14314 439 aa11.48□□□□□ -0.57
UBR4-205ENST00000417040 KCNJ8Q15842 424 aa11.48□□□□□ -0.57
UBR4-205ENST00000417040 WDR45BQ5MNZ6 344 aa11.48□□□□□ -0.57
UBR4-205ENST00000417040 TSPYL5Q86VY4 417 aaPredicted RBP11.48□□□□□ -0.57
UBR4-205ENST00000417040 RHEBL1Q8TAI7 183 aa11.48□□□□□ -0.57
UBR4-205ENST00000417040 ELP5Q8TE02 316 aa11.48□□□□□ -0.57
UBR4-205ENST00000417040 SAMD8Q96LT4 415 aa11.48□□□□□ -0.57
UBR4-205ENST00000417040 ZDHHC4Q9NPG8 344 aa11.48□□□□□ -0.57
UBR4-205ENST00000417040 MEIOCA2RUB1 952 aa11.48□□□□□ -0.57
UBR4-205ENST00000417040 RAB6AP20340 208 aa11.48□□□□□ -0.57
UBR4-205ENST00000417040 UGT2B10P36537 528 aa11.48□□□□□ -0.57
UBR4-205ENST00000417040 MCCD1P59942 119 aaPredicted RBP11.48□□□□□ -0.57
UBR4-205ENST00000417040 EMX1Q04741 257 aaPredicted RBP11.48□□□□□ -0.57
UBR4-205ENST00000417040 ISCA2Q86U28 154 aa11.48□□□□□ -0.57
UBR4-205ENST00000417040 TSPAN33Q86UF1 283 aa11.48□□□□□ -0.57
UBR4-205ENST00000417040 NRROSQ86YC3 692 aa11.48□□□□□ -0.57
UBR4-205ENST00000417040 SYT14Q8NB59 555 aa11.48□□□□□ -0.57
UBR4-205ENST00000417040 OR8J1Q8NGP2 316 aa11.48□□□□□ -0.57
UBR4-205ENST00000417040 PROKR1Q8TCW9 393 aa11.48□□□□□ -0.57
UBR4-205ENST00000417040 PAQR8Q8TEZ7 354 aa11.48□□□□□ -0.57
UBR4-205ENST00000417040 CNN2Q99439 309 aaKnown RBP11.48□□□□□ -0.57
UBR4-205ENST00000417040 COL1A1P02452 1464 aaPredicted RBP11.48□□□□□ -0.57
UBR4-205ENST00000417040 SOBPA7XYQ1 873 aa11.48□□□□□ -0.57
UBR4-205ENST00000417040 F5H5P2 479 aa11.48□□□□□ -0.57
UBR4-205ENST00000417040 HCRTR2O43614 444 aa11.48□□□□□ -0.57
UBR4-205ENST00000417040 IL33O95760 270 aa11.48□□□□□ -0.57
UBR4-205ENST00000417040 ZNF41P51814 821 aaPredicted RBP11.48□□□□□ -0.57
UBR4-205ENST00000417040 MC2RQ01718 297 aa11.48□□□□□ -0.57
UBR4-205ENST00000417040 GRIK2Q13002 908 aa11.48□□□□□ -0.57
UBR4-205ENST00000417040 GRM2Q14416 872 aa11.48□□□□□ -0.57
UBR4-205ENST00000417040 TOR1AIP2Q8NFQ8 470 aa11.48□□□□□ -0.57
UBR4-205ENST00000417040 FBXL12Q9NXK8 326 aa11.48□□□□□ -0.57
UBR4-205ENST00000417040 ANKMY1Q9P2S6 941 aa11.48□□□□□ -0.57
UBR4-205ENST00000417040 PCTPQ9UKL6 214 aa11.48□□□□□ -0.57
UBR4-205ENST00000417040 CCDC163A0A0D9SF12 145 aa11.48□□□□□ -0.57
UBR4-205ENST00000417040 ADRB3P13945 408 aa11.48□□□□□ -0.57
UBR4-205ENST00000417040 RPS2P15880 293 aaKnown RBP11.48□□□□□ -0.57
UBR4-205ENST00000417040 CD68P34810 354 aaPredicted RBP11.48□□□□□ -0.57
UBR4-205ENST00000417040 SHMT2P34897 504 aa11.48□□□□□ -0.57
UBR4-205ENST00000417040 PBX2P40425 430 aa11.48□□□□□ -0.57
UBR4-205ENST00000417040 PLEKHS1Q5SXH7 462 aa11.48□□□□□ -0.57
UBR4-205ENST00000417040 TMEM205Q6UW68 189 aa11.48□□□□□ -0.57
UBR4-205ENST00000417040 KCNN1Q92952 543 aa11.48□□□□□ -0.57
UBR4-205ENST00000417040 FUBP1Q96AE4 644 aaKnown RBP11.48□□□□□ -0.57
UBR4-205ENST00000417040 TMEM19Q96HH6 336 aa11.48□□□□□ -0.57
UBR4-205ENST00000417040 IL21RQ9HBE5 538 aa11.48□□□□□ -0.57
UBR4-205ENST00000417040 CPNE5Q9HCH3 593 aa11.48□□□□□ -0.57
UBR4-205ENST00000417040 GMPR2Q9P2T1 348 aaKnown RBP11.48□□□□□ -0.57
UBR4-205ENST00000417040 TRAV18A0A075B6X5 111 aa11.48□□□□□ -0.57
UBR4-205ENST00000417040 ARPC1BO15143 372 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms