RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 CCDC197Q8NCU1 140 aa13.11□□□□□ -0.31
VPS25-201ENST00000253794 DNAJB8Q8NHS0 232 aa13.11□□□□□ -0.31
VPS25-201ENST00000253794 BCAS4Q8TDM0 211 aa13.11□□□□□ -0.31
VPS25-201ENST00000253794 HOXB13Q92826 284 aaPredicted RBP13.11□□□□□ -0.31
VPS25-201ENST00000253794 KAT2AQ92830 837 aa13.11□□□□□ -0.31
VPS25-201ENST00000253794 VPS33AQ96AX1 596 aa13.11□□□□□ -0.31
VPS25-201ENST00000253794 FAM120BQ96EK7 910 aaKnown RBP13.11□□□□□ -0.31
VPS25-201ENST00000253794 SLC25A23Q9BV35 468 aa13.11□□□□□ -0.31
VPS25-201ENST00000253794 CNPPD1Q9BV87 410 aa13.11□□□□□ -0.31
VPS25-201ENST00000253794 OR10A5Q9H207 317 aa13.11□□□□□ -0.31
VPS25-201ENST00000253794 CXorf36Q9H7Y0 433 aa13.11□□□□□ -0.31
VPS25-201ENST00000253794 GMEB1Q9Y692 573 aa13.11□□□□□ -0.31
VPS25-201ENST00000253794 CROCCQ5TZA2 2017 aa13.1□□□□□ -0.31
VPS25-201ENST00000253794 EPG5Q9HCE0 2579 aa13.1□□□□□ -0.31
VPS25-201ENST00000253794 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.1□□□□□ -0.31
VPS25-201ENST00000253794 TRBV11-1A0A0K0K1C0 115 aa13.1□□□□□ -0.31
VPS25-201ENST00000253794 TMEM200CA6NKL6 621 aa13.1□□□□□ -0.31
VPS25-201ENST00000253794 BBIP1A8MTZ0 92 aa13.1□□□□□ -0.31
VPS25-201ENST00000253794 CAPN14A8MX76 684 aa13.1□□□□□ -0.31
VPS25-201ENST00000253794 MASP2O00187 686 aa13.1□□□□□ -0.31
VPS25-201ENST00000253794 NR5A2O00482 541 aa13.1□□□□□ -0.31
VPS25-201ENST00000253794 NDUFAB1O14561 156 aa13.1□□□□□ -0.31
VPS25-201ENST00000253794 EMC8O43402 210 aa13.1□□□□□ -0.31
VPS25-201ENST00000253794 ZFAND5O76080 213 aa13.1□□□□□ -0.31
VPS25-201ENST00000253794 CELA2AP08217 269 aa13.1□□□□□ -0.31
VPS25-201ENST00000253794 SNRPB2P08579 225 aaKnown RBP13.1□□□□□ -0.31
VPS25-201ENST00000253794 ITGAMP11215 1152 aa13.1□□□□□ -0.31
VPS25-201ENST00000253794 EFNA1P20827 205 aaPredicted RBP13.1□□□□□ -0.31
VPS25-201ENST00000253794 PTGER1P34995 402 aa13.1□□□□□ -0.31
VPS25-201ENST00000253794 GPC1P35052 558 aa13.1□□□□□ -0.31
VPS25-201ENST00000253794 MAP3K8P41279 467 aa13.1□□□□□ -0.31
VPS25-201ENST00000253794 RNF4P78317 190 aa13.1□□□□□ -0.31
VPS25-201ENST00000253794 PSPHP78330 225 aa13.1□□□□□ -0.31
VPS25-201ENST00000253794 MYBPC3Q14896 1274 aa13.1□□□□□ -0.31
VPS25-201ENST00000253794 TBR1Q16650 682 aa13.1□□□□□ -0.31
VPS25-201ENST00000253794 VPS26BQ4G0F5 336 aa13.1□□□□□ -0.31
VPS25-201ENST00000253794 LRIF1Q5T3J3 769 aa13.1□□□□□ -0.31
VPS25-201ENST00000253794 KIF2BQ8N4N8 673 aa13.1□□□□□ -0.31
VPS25-201ENST00000253794 OR56A1Q8NGH5 318 aa13.1□□□□□ -0.31
VPS25-201ENST00000253794 GIMAP5Q96F15 307 aa13.1□□□□□ -0.31
VPS25-201ENST00000253794 ITCHQ96J02 903 aa13.1□□□□□ -0.31
VPS25-201ENST00000253794 VSTM2LQ96N03 204 aa13.1□□□□□ -0.31
VPS25-201ENST00000253794 LRRC37BQ96QE4 947 aa13.1□□□□□ -0.31
VPS25-201ENST00000253794 C3orf14Q9HBI5 128 aa13.1□□□□□ -0.31
VPS25-201ENST00000253794 DDX18Q9NVP1 670 aaKnown RBP13.1□□□□□ -0.31
VPS25-201ENST00000253794 ARMCX1Q9P291 453 aa13.1□□□□□ -0.31
VPS25-201ENST00000253794 PRODH2Q9UF12 536 aa13.1□□□□□ -0.31
VPS25-201ENST00000253794 PCDHGB4Q9UN71 923 aa13.1□□□□□ -0.31
VPS25-201ENST00000253794 PCDHGA9Q9Y5G4 932 aaKnown RBP13.1□□□□□ -0.31
VPS25-201ENST00000253794 CACNA1GO43497 2377 aa13.1□□□□□ -0.31
VPS25-201ENST00000253794 A0A096LPI6 279 aa13.09□□□□□ -0.31
VPS25-201ENST00000253794 TRBV5-3A0A0A0MS03 114 aa13.09□□□□□ -0.31
VPS25-201ENST00000253794 TTC36A6NLP5 189 aa13.09□□□□□ -0.31
VPS25-201ENST00000253794 PRKNO60260 465 aaPredicted RBP13.09□□□□□ -0.31
VPS25-201ENST00000253794 ERN1O75460 977 aaKnown RBP13.09□□□□□ -0.31
VPS25-201ENST00000253794 DNAJB5O75953 348 aa13.09□□□□□ -0.31
VPS25-201ENST00000253794 UQCRC2P22695 453 aa13.09□□□□□ -0.31
VPS25-201ENST00000253794 PRDX6P30041 224 aa13.09□□□□□ -0.31
VPS25-201ENST00000253794 DCAF7P61962 342 aa13.09□□□□□ -0.31
VPS25-201ENST00000253794 PRR5P85299 388 aa13.09□□□□□ -0.31
VPS25-201ENST00000253794 EXOSC7Q15024 291 aaKnown RBP13.09□□□□□ -0.31
VPS25-201ENST00000253794 CRB2Q5IJ48 1285 aa13.09□□□□□ -0.31
VPS25-201ENST00000253794 ZCCHC12Q6PEW1 402 aa13.09□□□□□ -0.31
VPS25-201ENST00000253794 BHLHB9Q6PI77 547 aa13.09□□□□□ -0.31
VPS25-201ENST00000253794 GPR155Q7Z3F1 870 aa13.09□□□□□ -0.31
VPS25-201ENST00000253794 ANKRD46Q86W74 232 aa13.09□□□□□ -0.31
VPS25-201ENST00000253794 TREML1Q86YW5 311 aa13.09□□□□□ -0.31
VPS25-201ENST00000253794 TRIML2Q8N7C3 387 aa13.09□□□□□ -0.31
VPS25-201ENST00000253794 AMER2Q8N7J2 671 aa13.09□□□□□ -0.31
VPS25-201ENST00000253794 SIMC1Q8NDZ2 872 aa13.09□□□□□ -0.31
VPS25-201ENST00000253794 OR52R1Q8NGF1 315 aa13.09□□□□□ -0.31
VPS25-201ENST00000253794 OR5L2Q8NGL0 311 aa13.09□□□□□ -0.31
VPS25-201ENST00000253794 OR4A15Q8NGL6 344 aa13.09□□□□□ -0.31
VPS25-201ENST00000253794 C16orf52Q8NHV5 167 aa13.09□□□□□ -0.31
VPS25-201ENST00000253794 RP9Q8TA86 221 aaKnown RBP13.09□□□□□ -0.31
VPS25-201ENST00000253794 ADIPOR1Q96A54 375 aa13.09□□□□□ -0.31
VPS25-201ENST00000253794 TP53INP1Q96A56 240 aa13.09□□□□□ -0.31
VPS25-201ENST00000253794 THOC3Q96J01 351 aaKnown RBP13.09□□□□□ -0.31
VPS25-201ENST00000253794 MS4A4EQ96PG1 132 aa13.09□□□□□ -0.31
VPS25-201ENST00000253794 BTBD9Q96Q07 612 aa13.09□□□□□ -0.31
VPS25-201ENST00000253794 PANX1Q96RD7 426 aa13.09□□□□□ -0.31
VPS25-201ENST00000253794 DEFB126Q9BYW3 111 aa13.09□□□□□ -0.31
VPS25-201ENST00000253794 WWTR1Q9GZV5 400 aa13.09□□□□□ -0.31
VPS25-201ENST00000253794 PAIP1Q9H074 479 aaKnown RBP13.09□□□□□ -0.31
VPS25-201ENST00000253794 EPS8L2Q9H6S3 715 aa13.09□□□□□ -0.31
VPS25-201ENST00000253794 LEF1Q9UJU2 399 aaPredicted RBP13.09□□□□□ -0.31
VPS25-201ENST00000253794 NDUFAF1Q9Y375 327 aa13.09□□□□□ -0.31
VPS25-201ENST00000253794 HEMK1Q9Y5R4 338 aaPredicted RBP13.09□□□□□ -0.31
VPS25-201ENST00000253794 RFXANKO14593 260 aa13.08□□□□□ -0.32
VPS25-201ENST00000253794 ITGA3P26006 1051 aa13.08□□□□□ -0.32
VPS25-201ENST00000253794 CDKN2CP42773 168 aa13.08□□□□□ -0.32
VPS25-201ENST00000253794 MAGEA8P43361 318 aa13.08□□□□□ -0.32
VPS25-201ENST00000253794 PPICP45877 212 aa13.08□□□□□ -0.32
VPS25-201ENST00000253794 CCT3P49368 545 aaKnown RBP13.08□□□□□ -0.32
VPS25-201ENST00000253794 MLF1P58340 268 aa13.08□□□□□ -0.32
VPS25-201ENST00000253794 STX5Q13190 355 aa13.08□□□□□ -0.32
VPS25-201ENST00000253794 GAB1Q13480 694 aa13.08□□□□□ -0.32
VPS25-201ENST00000253794 ST3GAL2Q16842 350 aa13.08□□□□□ -0.32
VPS25-201ENST00000253794 PAGE3Q5JUK9 113 aa13.08□□□□□ -0.32
VPS25-201ENST00000253794 SAXO2Q658L1 398 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms