RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 N4BP1O75113 896 aaKnown RBP2.53□□□□□ -2
SCFD1-219ENST00000556413 RPS6KA5O75582 802 aa2.53□□□□□ -2
SCFD1-219ENST00000556413 DCNP07585 359 aaKnown RBP2.53□□□□□ -2
SCFD1-219ENST00000556413 CPT2P23786 658 aa2.53□□□□□ -2
SCFD1-219ENST00000556413 CHRNA3P32297 505 aa2.53□□□□□ -2
SCFD1-219ENST00000556413 CSE1LP55060 971 aaKnown RBP2.53□□□□□ -2
SCFD1-219ENST00000556413 OR1D5P58170 312 aa2.53□□□□□ -2
SCFD1-219ENST00000556413 NTHL1P78549 312 aa2.53□□□□□ -2
SCFD1-219ENST00000556413 IGLV3-21P80748 117 aaPredicted RBP2.53□□□□□ -2
SCFD1-219ENST00000556413 RBPJQ06330 500 aa2.53□□□□□ -2
SCFD1-219ENST00000556413 SIGLEC14Q08ET2 396 aa2.53□□□□□ -2
SCFD1-219ENST00000556413 OPCMLQ14982 345 aa2.53□□□□□ -2
SCFD1-219ENST00000556413 IMMTQ16891 758 aaKnown RBP2.53□□□□□ -2
SCFD1-219ENST00000556413 C2orf83Q53S99 150 aa2.53□□□□□ -2
SCFD1-219ENST00000556413 C9orf152Q5JTZ5 239 aa2.53□□□□□ -2
SCFD1-219ENST00000556413 CFAP58Q5T655 872 aa2.53□□□□□ -2
SCFD1-219ENST00000556413 GPR139Q6DWJ6 353 aa2.53□□□□□ -2
SCFD1-219ENST00000556413 OR4C11Q6IEV9 310 aa2.53□□□□□ -2
SCFD1-219ENST00000556413 TMUB2Q71RG4 321 aa2.53□□□□□ -2
SCFD1-219ENST00000556413 GET4Q7L5D6 327 aaPredicted RBP2.53□□□□□ -2
SCFD1-219ENST00000556413 CDR2LQ86X02 465 aaPredicted RBP2.53□□□□□ -2
SCFD1-219ENST00000556413 IQCA1Q86XH1 822 aa2.53□□□□□ -2
SCFD1-219ENST00000556413 HIPK1Q86Z02 1210 aa2.53□□□□□ -2
SCFD1-219ENST00000556413 CCDC60Q8IWA6 550 aaPredicted RBP2.53□□□□□ -2
SCFD1-219ENST00000556413 RCOR2Q8IZ40 523 aa2.53□□□□□ -2
SCFD1-219ENST00000556413 SLC22A15Q8IZD6 547 aa2.53□□□□□ -2
SCFD1-219ENST00000556413 XXYLT1Q8NBI6 393 aa2.53□□□□□ -2
SCFD1-219ENST00000556413 KCTD6Q8NC69 237 aa2.53□□□□□ -2
SCFD1-219ENST00000556413 KCNE4Q8WWG9 221 aa2.53□□□□□ -2
SCFD1-219ENST00000556413 ROBO4Q8WZ75 1007 aa2.53□□□□□ -2
SCFD1-219ENST00000556413 C11orf52Q96A22 123 aa2.53□□□□□ -2
SCFD1-219ENST00000556413 PHYHIPLQ96FC7 376 aa2.53□□□□□ -2
SCFD1-219ENST00000556413 KLHL5Q96PQ7 755 aa2.53□□□□□ -2
SCFD1-219ENST00000556413 PRRG4Q9BZD6 226 aa2.53□□□□□ -2
SCFD1-219ENST00000556413 RNF41Q9H4P4 317 aaPredicted RBP2.53□□□□□ -2
SCFD1-219ENST00000556413 LY9Q9HBG7 655 aa2.53□□□□□ -2
SCFD1-219ENST00000556413 IL1RAPQ9NPH3 570 aa2.53□□□□□ -2
SCFD1-219ENST00000556413 ANKEF1Q9NU02 776 aa2.53□□□□□ -2
SCFD1-219ENST00000556413 CTNNA3Q9UI47 895 aa2.53□□□□□ -2
SCFD1-219ENST00000556413 PRG3Q9Y2Y8 225 aaPredicted RBP2.53□□□□□ -2
SCFD1-219ENST00000556413 MRPS18CQ9Y3D5 142 aaKnown RBP2.53□□□□□ -2
SCFD1-219ENST00000556413 DOCK5Q9H7D0 1870 aa2.53□□□□□ -2
SCFD1-219ENST00000556413 MICAL3Q7RTP6 2002 aa2.52□□□□□ -2.01
SCFD1-219ENST00000556413 KMT2EQ8IZD2 1858 aa2.52□□□□□ -2.01
SCFD1-219ENST00000556413 KIAA1671Q9BY89 1806 aa2.52□□□□□ -2.01
SCFD1-219ENST00000556413 ZMYM6O95789 1325 aa2.52□□□□□ -2.01
SCFD1-219ENST00000556413 FRMPD4Q14CM0 1322 aa2.52□□□□□ -2.01
SCFD1-219ENST00000556413 NRCAMQ92823 1304 aa2.52□□□□□ -2.01
SCFD1-219ENST00000556413 IGSF9BQ9UPX0 1349 aa2.52□□□□□ -2.01
SCFD1-219ENST00000556413 IQCMA0A1B0GVH7 501 aa2.52□□□□□ -2.01
SCFD1-219ENST00000556413 MBLAC1A4D2B0 266 aaPredicted RBP2.52□□□□□ -2.01
SCFD1-219ENST00000556413 FAM86B1E9PN63 330 aa2.52□□□□□ -2.01
SCFD1-219ENST00000556413 M0QZ92 97 aa2.52□□□□□ -2.01
SCFD1-219ENST00000556413 CLDN4O14493 209 aa2.52□□□□□ -2.01
SCFD1-219ENST00000556413 VENTXO95231 258 aa2.52□□□□□ -2.01
SCFD1-219ENST00000556413 FAM86B2P0C5J1 330 aa2.52□□□□□ -2.01
SCFD1-219ENST00000556413 CALM1P0DP23 149 aa2.52□□□□□ -2.01
SCFD1-219ENST00000556413 CALM2P0DP24 149 aa2.52□□□□□ -2.01
SCFD1-219ENST00000556413 CALM3P0DP25 149 aa2.52□□□□□ -2.01
SCFD1-219ENST00000556413 SAGP10523 405 aaPredicted RBP2.52□□□□□ -2.01
SCFD1-219ENST00000556413 GLULP15104 373 aa2.52□□□□□ -2.01
SCFD1-219ENST00000556413 ANPEPP15144 967 aa2.52□□□□□ -2.01
SCFD1-219ENST00000556413 ACHEP22303 614 aa2.52□□□□□ -2.01
SCFD1-219ENST00000556413 KIF5BP33176 963 aa2.52□□□□□ -2.01
SCFD1-219ENST00000556413 SLC11A1P49279 550 aa2.52□□□□□ -2.01
SCFD1-219ENST00000556413 LIMK1P53667 647 aa2.52□□□□□ -2.01
SCFD1-219ENST00000556413 NAPAP54920 295 aa2.52□□□□□ -2.01
SCFD1-219ENST00000556413 ABCE1P61221 599 aaKnown RBP2.52□□□□□ -2.01
SCFD1-219ENST00000556413 SRSF5Q13243 272 aaKnown RBP2.52□□□□□ -2.01
SCFD1-219ENST00000556413 NONOQ15233 471 aaKnown RBP eCLIP2.52□□□□□ -2.01
SCFD1-219ENST00000556413 ANGPT1Q15389 498 aa2.52□□□□□ -2.01
SCFD1-219ENST00000556413 ATP1A1-AS1Q5TC04 95 aa2.52□□□□□ -2.01
SCFD1-219ENST00000556413 DET1Q7L5Y6 550 aa2.52□□□□□ -2.01
SCFD1-219ENST00000556413 LRTM2Q8N967 370 aa2.52□□□□□ -2.01
SCFD1-219ENST00000556413 RASGEF1AQ8N9B8 481 aa2.52□□□□□ -2.01
SCFD1-219ENST00000556413 POMGNT2Q8NAT1 580 aa2.52□□□□□ -2.01
SCFD1-219ENST00000556413 RPLP0P6Q8NHW5 317 aa2.52□□□□□ -2.01
SCFD1-219ENST00000556413 ITLN1Q8WWA0 313 aa2.52□□□□□ -2.01
SCFD1-219ENST00000556413 ING5Q8WYH8 240 aa2.52□□□□□ -2.01
SCFD1-219ENST00000556413 SEPT1Q8WYJ6 367 aa2.52□□□□□ -2.01
SCFD1-219ENST00000556413 MRPS27Q92552 414 aaKnown RBP2.52□□□□□ -2.01
SCFD1-219ENST00000556413 PROX1Q92786 737 aa2.52□□□□□ -2.01
SCFD1-219ENST00000556413 PGAP3Q96FM1 320 aaPredicted RBP2.52□□□□□ -2.01
SCFD1-219ENST00000556413 ZNF558Q96NG5 402 aa2.52□□□□□ -2.01
SCFD1-219ENST00000556413 CASD1Q96PB1 797 aa2.52□□□□□ -2.01
SCFD1-219ENST00000556413 LRRC3BQ96PB8 259 aa2.52□□□□□ -2.01
SCFD1-219ENST00000556413 TAAR6Q96RI8 345 aa2.52□□□□□ -2.01
SCFD1-219ENST00000556413 UPF3BQ9BZI7 483 aaKnown RBP2.52□□□□□ -2.01
SCFD1-219ENST00000556413 KRT23Q9C075 422 aa2.52□□□□□ -2.01
SCFD1-219ENST00000556413 CXCL16Q9H2A7 254 aa2.52□□□□□ -2.01
SCFD1-219ENST00000556413 ST6GALNAC4Q9H4F1 302 aa2.52□□□□□ -2.01
SCFD1-219ENST00000556413 AZI2Q9H6S1 392 aa2.52□□□□□ -2.01
SCFD1-219ENST00000556413 PSTPIP2Q9H939 334 aa2.52□□□□□ -2.01
SCFD1-219ENST00000556413 TBC1D13Q9NVG8 400 aa2.52□□□□□ -2.01
SCFD1-219ENST00000556413 C5AR2Q9P296 337 aa2.52□□□□□ -2.01
SCFD1-219ENST00000556413 GTF3C4Q9UKN8 822 aa2.52□□□□□ -2.01
SCFD1-219ENST00000556413 MTF2Q9Y483 593 aaPredicted RBP2.52□□□□□ -2.01
SCFD1-219ENST00000556413 HES2Q9Y543 173 aa2.52□□□□□ -2.01
SCFD1-219ENST00000556413 UBIAD1Q9Y5Z9 338 aa2.52□□□□□ -2.01
SCFD1-219ENST00000556413 DMXL1Q9Y485 3027 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms