RNA–Protein interactions for RNA: ENST00000525004.5

UBXN1-205, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-205ENST00000525004 PTGFRNQ9P2B2 879 aa13.07□□□□□ -0.32
UBXN1-205ENST00000525004 FBXL4Q9UKA2 621 aa13.07□□□□□ -0.32
UBXN1-205ENST00000525004 C19orf53Q9UNZ5 99 aaPredicted RBP13.07□□□□□ -0.32
UBXN1-205ENST00000525004 POLHQ9Y253 713 aa13.07□□□□□ -0.32
UBXN1-205ENST00000525004 GMEB1Q9Y692 573 aa13.07□□□□□ -0.32
UBXN1-205ENST00000525004 CAPN7Q9Y6W3 813 aa13.07□□□□□ -0.32
UBXN1-205ENST00000525004 CNTRLQ7Z7A1 2325 aa13.07□□□□□ -0.32
UBXN1-205ENST00000525004 MGAQ8IWI9 3026 aa13.07□□□□□ -0.32
UBXN1-205ENST00000525004 CPAMD8Q8IZJ3 1885 aa13.06□□□□□ -0.32
UBXN1-205ENST00000525004 CCDC154A6NI56 674 aa13.06□□□□□ -0.32
UBXN1-205ENST00000525004 HRKO00198 91 aa13.06□□□□□ -0.32
UBXN1-205ENST00000525004 DYRK3O43781 588 aa13.06□□□□□ -0.32
UBXN1-205ENST00000525004 BCAS2O75934 225 aaPredicted RBP13.06□□□□□ -0.32
UBXN1-205ENST00000525004 SEC24DO94855 1032 aaPredicted RBP13.06□□□□□ -0.32
UBXN1-205ENST00000525004 C6orf47O95873 294 aa13.06□□□□□ -0.32
UBXN1-205ENST00000525004 CBX7O95931 251 aa13.06□□□□□ -0.32
UBXN1-205ENST00000525004 ZCCHC18P0CG32 403 aa13.06□□□□□ -0.32
UBXN1-205ENST00000525004 HOXB9P17482 250 aaPredicted RBP13.06□□□□□ -0.32
UBXN1-205ENST00000525004 TNNI3P19429 210 aa13.06□□□□□ -0.32
UBXN1-205ENST00000525004 NT5EP21589 574 aa13.06□□□□□ -0.32
UBXN1-205ENST00000525004 TRPC1P48995 793 aa13.06□□□□□ -0.32
UBXN1-205ENST00000525004 SLC37A1P57057 533 aa13.06□□□□□ -0.32
UBXN1-205ENST00000525004 VAC14Q08AM6 782 aa13.06□□□□□ -0.32
UBXN1-205ENST00000525004 Q0VFX4 171 aa13.06□□□□□ -0.32
UBXN1-205ENST00000525004 ZNF267Q14586 743 aaPredicted RBP13.06□□□□□ -0.32
UBXN1-205ENST00000525004 LTB4RQ15722 352 aa13.06□□□□□ -0.32
UBXN1-205ENST00000525004 MAPKAPK3Q16644 382 aa13.06□□□□□ -0.32
UBXN1-205ENST00000525004 VPS26BQ4G0F5 336 aa13.06□□□□□ -0.32
UBXN1-205ENST00000525004 TRMT12Q53H54 448 aaKnown RBP13.06□□□□□ -0.32
UBXN1-205ENST00000525004 ATP1A1-AS1Q5TC04 95 aa13.06□□□□□ -0.32
UBXN1-205ENST00000525004 H3F3CQ6NXT2 135 aa13.06□□□□□ -0.32
UBXN1-205ENST00000525004 TMEM64Q6YI46 380 aa13.06□□□□□ -0.32
UBXN1-205ENST00000525004 GK5Q6ZS86 529 aa13.06□□□□□ -0.32
UBXN1-205ENST00000525004 CLECL1Q8IZS7 167 aa13.06□□□□□ -0.32
UBXN1-205ENST00000525004 VWA5B2Q8N398 1253 aa13.06□□□□□ -0.32
UBXN1-205ENST00000525004 ADCY4Q8NFM4 1077 aa13.06□□□□□ -0.32
UBXN1-205ENST00000525004 OR7G2Q8NG99 324 aa13.06□□□□□ -0.32
UBXN1-205ENST00000525004 OR8K3Q8NH51 312 aa13.06□□□□□ -0.32
UBXN1-205ENST00000525004 RP9Q8TA86 221 aaKnown RBP13.06□□□□□ -0.32
UBXN1-205ENST00000525004 HOXB13Q92826 284 aaPredicted RBP13.06□□□□□ -0.32
UBXN1-205ENST00000525004 VPS33AQ96AX1 596 aa13.06□□□□□ -0.32
UBXN1-205ENST00000525004 VMP1Q96GC9 406 aa13.06□□□□□ -0.32
UBXN1-205ENST00000525004 SLC25A23Q9BV35 468 aa13.06□□□□□ -0.32
UBXN1-205ENST00000525004 ZNF223Q9UK11 482 aaPredicted RBP13.06□□□□□ -0.32
UBXN1-205ENST00000525004 MAP1BP46821 2468 aaKnown RBP13.05□□□□□ -0.32
UBXN1-205ENST00000525004 CACNA1GO43497 2377 aa13.05□□□□□ -0.32
UBXN1-205ENST00000525004 UPK1AO00322 258 aa13.05□□□□□ -0.32
UBXN1-205ENST00000525004 SERPINA7P05543 415 aa13.05□□□□□ -0.32
UBXN1-205ENST00000525004 EFNA1P20827 205 aaPredicted RBP13.05□□□□□ -0.32
UBXN1-205ENST00000525004 PRDX6P30041 224 aa13.05□□□□□ -0.32
UBXN1-205ENST00000525004 CDK9P50750 372 aaKnown RBP13.05□□□□□ -0.32
UBXN1-205ENST00000525004 RRADP55042 308 aa13.05□□□□□ -0.32
UBXN1-205ENST00000525004 TMPRSS3P57727 454 aa13.05□□□□□ -0.32
UBXN1-205ENST00000525004 AP2B1P63010 937 aa13.05□□□□□ -0.32
UBXN1-205ENST00000525004 MRPS35P82673 323 aaKnown RBP13.05□□□□□ -0.32
UBXN1-205ENST00000525004 CHAF1BQ13112 559 aa13.05□□□□□ -0.32
UBXN1-205ENST00000525004 AIMP2Q13155 320 aaKnown RBP13.05□□□□□ -0.32
UBXN1-205ENST00000525004 DUSP8Q13202 625 aa13.05□□□□□ -0.32
UBXN1-205ENST00000525004 MAPRE2Q15555 327 aa13.05□□□□□ -0.32
UBXN1-205ENST00000525004 TIGD2Q4W5G0 525 aa13.05□□□□□ -0.32
UBXN1-205ENST00000525004 PAGE3Q5JUK9 113 aa13.05□□□□□ -0.32
UBXN1-205ENST00000525004 EXOSC6Q5RKV6 272 aaKnown RBP13.05□□□□□ -0.32
UBXN1-205ENST00000525004 LRIF1Q5T3J3 769 aa13.05□□□□□ -0.32
UBXN1-205ENST00000525004 FITM2Q8N6M3 262 aa13.05□□□□□ -0.32
UBXN1-205ENST00000525004 AMER2Q8N7J2 671 aa13.05□□□□□ -0.32
UBXN1-205ENST00000525004 ZNF321PQ8N8H1 164 aa13.05□□□□□ -0.32
UBXN1-205ENST00000525004 DNAJB8Q8NHS0 232 aa13.05□□□□□ -0.32
UBXN1-205ENST00000525004 SFXN5Q8TD22 340 aa13.05□□□□□ -0.32
UBXN1-205ENST00000525004 KAT2AQ92830 837 aa13.05□□□□□ -0.32
UBXN1-205ENST00000525004 NCLNQ969V3 563 aa13.05□□□□□ -0.32
UBXN1-205ENST00000525004 ITCHQ96J02 903 aa13.05□□□□□ -0.32
UBXN1-205ENST00000525004 NUDT9Q9BW91 350 aa13.05□□□□□ -0.32
UBXN1-205ENST00000525004 CXorf36Q9H7Y0 433 aa13.05□□□□□ -0.32
UBXN1-205ENST00000525004 RMND5AQ9H871 391 aa13.05□□□□□ -0.32
UBXN1-205ENST00000525004 ZNF160Q9HCG1 818 aa13.05□□□□□ -0.32
UBXN1-205ENST00000525004 ATP13A2Q9NQ11 1180 aa13.05□□□□□ -0.32
UBXN1-205ENST00000525004 MAP10Q9P2G4 905 aa13.05□□□□□ -0.32
UBXN1-205ENST00000525004 PCDHGB4Q9UN71 923 aa13.05□□□□□ -0.32
UBXN1-205ENST00000525004 ERVK-19Q9WJR5 959 aa13.05□□□□□ -0.32
UBXN1-205ENST00000525004 NDUFAF1Q9Y375 327 aa13.05□□□□□ -0.32
UBXN1-205ENST00000525004 ZZEF1O43149 2961 aa13.05□□□□□ -0.32
UBXN1-205ENST00000525004 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.04□□□□□ -0.32
UBXN1-205ENST00000525004 TRBV5-3A0A0A0MS03 114 aa13.04□□□□□ -0.32
UBXN1-205ENST00000525004 OR6C76A6NM76 312 aa13.04□□□□□ -0.32
UBXN1-205ENST00000525004 NR5A2O00482 541 aa13.04□□□□□ -0.32
UBXN1-205ENST00000525004 FBP2O00757 339 aa13.04□□□□□ -0.32
UBXN1-205ENST00000525004 EMC8O43402 210 aa13.04□□□□□ -0.32
UBXN1-205ENST00000525004 ERN1O75460 977 aaKnown RBP13.04□□□□□ -0.32
UBXN1-205ENST00000525004 PRKAR1AP10644 381 aa13.04□□□□□ -0.32
UBXN1-205ENST00000525004 SSTR4P31391 388 aa13.04□□□□□ -0.32
UBXN1-205ENST00000525004 PTGER1P34995 402 aa13.04□□□□□ -0.32
UBXN1-205ENST00000525004 MAP3K8P41279 467 aa13.04□□□□□ -0.32
UBXN1-205ENST00000525004 MC3RP41968 323 aa13.04□□□□□ -0.32
UBXN1-205ENST00000525004 EMDP50402 254 aa13.04□□□□□ -0.32
UBXN1-205ENST00000525004 CLCN2P51788 898 aa13.04□□□□□ -0.32
UBXN1-205ENST00000525004 HSPB3Q12988 150 aa13.04□□□□□ -0.32
UBXN1-205ENST00000525004 STX5Q13190 355 aa13.04□□□□□ -0.32
UBXN1-205ENST00000525004 CYLC2Q14093 348 aaPredicted RBP13.04□□□□□ -0.32
UBXN1-205ENST00000525004 BTBD16Q32M84 506 aa13.04□□□□□ -0.32
UBXN1-205ENST00000525004 JMJD6Q6NYC1 403 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms