RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 BUB1O43683 1085 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 SORBS2O94875 1100 aaKnown RBP2□□□□□ -2.09
LMNB1-207ENST00000494185 NDUFA7O95182 113 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 PRAMEF12O95522 483 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 DUS4LO95620 317 aaKnown RBP2□□□□□ -2.09
LMNB1-207ENST00000494185 MT-ND2P03891 347 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 PROS1P07225 676 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 ADORA3P0DMS8 318 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 EPB41P11171 864 aaKnown RBP2□□□□□ -2.09
LMNB1-207ENST00000494185 PDHBP11177 359 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 B4GALT1P15291 398 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 CTNNA2P26232 953 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 PTPN4P29074 926 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 PTPN6P29350 595 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 PBLDP30039 288 aaPredicted RBP2□□□□□ -2.09
LMNB1-207ENST00000494185 FCGR2BP31994 310 aaPredicted RBP2□□□□□ -2.09
LMNB1-207ENST00000494185 GPR183P32249 361 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 ACADVLP49748 655 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 PGFP49763 221 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 ABCE1P61221 599 aaKnown RBP2□□□□□ -2.09
LMNB1-207ENST00000494185 CDKL1Q00532 357 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 CNTN1Q12860 1018 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 IL24Q13007 206 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 ZNF177Q13360 481 aaPredicted RBP2□□□□□ -2.09
LMNB1-207ENST00000494185 SNTB2Q13425 540 aaKnown RBP2□□□□□ -2.09
LMNB1-207ENST00000494185 ADPRMQ3LIE5 342 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 ZNF528Q3MIS6 628 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 CMPK2Q5EBM0 449 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 CFAP157Q5JU67 520 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 LDLRAP1Q5SW96 308 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 CDC42EP5Q6NZY7 148 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 PAQR6Q6TCH4 344 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 CES3Q6UWW8 571 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 C17orf107Q6ZR85 190 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 Q6ZRP5 223 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 PAQR9Q6ZVX9 377 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 BNIPLQ7Z465 357 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 TRMT11Q7Z4G4 463 aaKnown RBP2□□□□□ -2.09
LMNB1-207ENST00000494185 ZC3H3Q8IXZ2 948 aaKnown RBP2□□□□□ -2.09
LMNB1-207ENST00000494185 GCNT2Q8N0V5 402 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 ELMOD1Q8N336 334 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 SPEM1Q8N4L4 309 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 TCEANCQ8N8B7 351 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 MAPK1IP1LQ8NDC0 245 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 OR13C5Q8NGS8 318 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 OR2T34Q8NGX1 318 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 OR4L1Q8NH43 312 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 C8orf46Q8TAG6 207 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 CD99L2Q8TCZ2 262 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 RLN3Q8WXF3 142 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 PHYHIPQ92561 330 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 FCGR1BQ92637 280 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 GTF3AQ92664 365 aaKnown RBP2□□□□□ -2.09
LMNB1-207ENST00000494185 P3H4Q92791 437 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 CASP10Q92851 521 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 TOMM40LQ969M1 308 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 SLC35C1Q96A29 364 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 TMEM45BQ96B21 275 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 MRPL53Q96EL3 112 aaKnown RBP2□□□□□ -2.09
LMNB1-207ENST00000494185 AGPAT1Q99943 283 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 TCHPQ9BT92 498 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 ZSCAN5AQ9BUG6 496 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 SLC26A1Q9H2B4 701 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 FAM124BQ9H5Z6 455 aaPredicted RBP2□□□□□ -2.09
LMNB1-207ENST00000494185 EGLN3Q9H6Z9 239 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 ZNF665Q9H7R5 613 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 S100A14Q9HCY8 104 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 STAU2Q9NUL3 570 aaKnown RBP eCLIP2□□□□□ -2.09
LMNB1-207ENST00000494185 PLEK2Q9NYT0 353 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 HACD3Q9P035 362 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 C6orf203Q9P0P8 240 aaPredicted RBP2□□□□□ -2.09
LMNB1-207ENST00000494185 ZNF319Q9P2F9 582 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 POLKQ9UBT6 870 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 MRTO4Q9UKD2 239 aaKnown RBP2□□□□□ -2.09
LMNB1-207ENST00000494185 SNX6Q9UNH7 406 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 DIMT1Q9UNQ2 313 aaKnown RBP2□□□□□ -2.09
LMNB1-207ENST00000494185 FOXJ3Q9UPW0 622 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 NCKAP1Q9Y2A7 1128 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 AUP1Q9Y679 476 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 DYNC1LI1Q9Y6G9 523 aaKnown RBP2□□□□□ -2.09
LMNB1-207ENST00000494185 PTPRUQ92729 1446 aa2□□□□□ -2.09
LMNB1-207ENST00000494185 ABCC4O15439 1325 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 SF3B1O75533 1304 aaKnown RBP eCLIP1.99□□□□□ -2.09
LMNB1-207ENST00000494185 C15orf38-AP3S2A0A0A6YYH1 394 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 RNF222A6NCQ9 220 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 SRRM4A7MD48 611 aaKnown RBP1.99□□□□□ -2.09
LMNB1-207ENST00000494185 MPTX1A8MV57 137 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 AP3B1O00203 1094 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 INPP4BO15327 924 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 MLNRO43193 412 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 NUDT21O43809 227 aaKnown RBP1.99□□□□□ -2.09
LMNB1-207ENST00000494185 GPRIN2O60269 458 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 SAP30O75446 220 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 FGF19O95750 216 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 RPLP0P05388 317 aaKnown RBP1.99□□□□□ -2.09
LMNB1-207ENST00000494185 ASNSP08243 561 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 IQCF3P0C7M6 154 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 SFTPCP11686 197 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 DRD5P21918 477 aa1.99□□□□□ -2.09
LMNB1-207ENST00000494185 GLRA1P23415 457 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms