RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 SH2D2AQ9NP31 389 aa11.9□□□□□ -0.5
HDAC1-209ENST00000484305 SACM1LQ9NTJ5 587 aa11.9□□□□□ -0.5
HDAC1-209ENST00000484305 MAT2BQ9NZL9 334 aa11.9□□□□□ -0.5
HDAC1-209ENST00000484305 PSME2Q9UL46 239 aa11.9□□□□□ -0.5
HDAC1-209ENST00000484305 DLGAP4Q9Y2H0 992 aa11.9□□□□□ -0.5
HDAC1-209ENST00000484305 CDC40O60508 579 aaKnown RBP eCLIP11.89□□□□□ -0.51
HDAC1-209ENST00000484305 SPAG7O75391 227 aa11.89□□□□□ -0.51
HDAC1-209ENST00000484305 PDE9AO76083 593 aa11.89□□□□□ -0.51
HDAC1-209ENST00000484305 GLSO94925 669 aaPredicted RBP11.89□□□□□ -0.51
HDAC1-209ENST00000484305 FBXO45P0C2W1 286 aa11.89□□□□□ -0.51
HDAC1-209ENST00000484305 PIGAP37287 484 aa11.89□□□□□ -0.51
HDAC1-209ENST00000484305 CASP6P55212 293 aa11.89□□□□□ -0.51
HDAC1-209ENST00000484305 PPIAP62937 165 aaKnown RBP11.89□□□□□ -0.51
HDAC1-209ENST00000484305 PLGLB1Q02325 96 aa11.89□□□□□ -0.51
HDAC1-209ENST00000484305 MAP4K2Q12851 820 aa11.89□□□□□ -0.51
HDAC1-209ENST00000484305 EXOSC7Q15024 291 aaKnown RBP11.89□□□□□ -0.51
HDAC1-209ENST00000484305 LTB4RQ15722 352 aa11.89□□□□□ -0.51
HDAC1-209ENST00000484305 SPDYAQ5MJ70 313 aa11.89□□□□□ -0.51
HDAC1-209ENST00000484305 C6orf163Q5TEZ5 329 aa11.89□□□□□ -0.51
HDAC1-209ENST00000484305 SLC22A10Q63ZE4 541 aa11.89□□□□□ -0.51
HDAC1-209ENST00000484305 CLEC6AQ6EIG7 209 aa11.89□□□□□ -0.51
HDAC1-209ENST00000484305 GALNT18Q6P9A2 607 aa11.89□□□□□ -0.51
HDAC1-209ENST00000484305 GK5Q6ZS86 529 aa11.89□□□□□ -0.51
HDAC1-209ENST00000484305 VWA5B2Q8N398 1253 aa11.89□□□□□ -0.51
HDAC1-209ENST00000484305 FAM13CQ8NE31 585 aa11.89□□□□□ -0.51
HDAC1-209ENST00000484305 OR7G1Q8NGA0 311 aa11.89□□□□□ -0.51
HDAC1-209ENST00000484305 PAQR8Q8TEZ7 354 aa11.89□□□□□ -0.51
HDAC1-209ENST00000484305 ITLN2Q8WWU7 325 aaPredicted RBP11.89□□□□□ -0.51
HDAC1-209ENST00000484305 ADIPOR1Q96A54 375 aa11.89□□□□□ -0.51
HDAC1-209ENST00000484305 TP53INP1Q96A56 240 aa11.89□□□□□ -0.51
HDAC1-209ENST00000484305 FAM111AQ96PZ2 611 aa11.89□□□□□ -0.51
HDAC1-209ENST00000484305 GATA5Q9BWX5 397 aaPredicted RBP11.89□□□□□ -0.51
HDAC1-209ENST00000484305 PARD6BQ9BYG5 372 aa11.89□□□□□ -0.51
HDAC1-209ENST00000484305 ROPN1BQ9BZX4 212 aaPredicted RBP11.89□□□□□ -0.51
HDAC1-209ENST00000484305 BRINP2Q9C0B6 783 aa11.89□□□□□ -0.51
HDAC1-209ENST00000484305 IQCGQ9H095 443 aaKnown RBP11.89□□□□□ -0.51
HDAC1-209ENST00000484305 ROPN1Q9HAT0 212 aaPredicted RBP11.89□□□□□ -0.51
HDAC1-209ENST00000484305 SIRT5Q9NXA8 310 aa11.89□□□□□ -0.51
HDAC1-209ENST00000484305 MKS1Q9NXB0 559 aa11.89□□□□□ -0.51
HDAC1-209ENST00000484305 TUBA8Q9NY65 449 aaPredicted RBP11.89□□□□□ -0.51
HDAC1-209ENST00000484305 SLC17A7Q9P2U7 560 aa11.89□□□□□ -0.51
HDAC1-209ENST00000484305 ZNF639Q9UID6 485 aa11.89□□□□□ -0.51
HDAC1-209ENST00000484305 UTS2RQ9UKP6 389 aa11.89□□□□□ -0.51
HDAC1-209ENST00000484305 DTX4Q9Y2E6 619 aa11.89□□□□□ -0.51
HDAC1-209ENST00000484305 CHCHD2Q9Y6H1 151 aaPredicted RBP11.89□□□□□ -0.51
HDAC1-209ENST00000484305 ZNF780BQ9Y6R6 833 aa11.89□□□□□ -0.51
HDAC1-209ENST00000484305 FREM3P0C091 2139 aa11.89□□□□□ -0.51
HDAC1-209ENST00000484305 MAST4O15021 2626 aa11.88□□□□□ -0.51
HDAC1-209ENST00000484305 ESPNB1AK53 854 aa11.88□□□□□ -0.51
HDAC1-209ENST00000484305 H3BQF6 201 aa11.88□□□□□ -0.51
HDAC1-209ENST00000484305 TRIM13O60858 407 aa11.88□□□□□ -0.51
HDAC1-209ENST00000484305 CRCPO75575 148 aa11.88□□□□□ -0.51
HDAC1-209ENST00000484305 LRATO95237 230 aa11.88□□□□□ -0.51
HDAC1-209ENST00000484305 ANXA4P09525 319 aaPredicted RBP11.88□□□□□ -0.51
HDAC1-209ENST00000484305 UROSP10746 265 aa11.88□□□□□ -0.51
HDAC1-209ENST00000484305 DRD2P14416 443 aa11.88□□□□□ -0.51
HDAC1-209ENST00000484305 GPX3P22352 226 aa11.88□□□□□ -0.51
HDAC1-209ENST00000484305 ALDH3A1P30838 453 aa11.88□□□□□ -0.51
HDAC1-209ENST00000484305 FOXO1Q12778 655 aa11.88□□□□□ -0.51
HDAC1-209ENST00000484305 DUSP8Q13202 625 aa11.88□□□□□ -0.51
HDAC1-209ENST00000484305 NTRK2Q16620 822 aa11.88□□□□□ -0.51
HDAC1-209ENST00000484305 TRMT12Q53H54 448 aaKnown RBP11.88□□□□□ -0.51
HDAC1-209ENST00000484305 PRAMEF20Q5VT98 475 aa11.88□□□□□ -0.51
HDAC1-209ENST00000484305 HLA-DQA1Q5Y7H0 255 aa11.88□□□□□ -0.51
HDAC1-209ENST00000484305 C3P1Q6ZMU1 363 aa11.88□□□□□ -0.51
HDAC1-209ENST00000484305 TRIM46Q7Z4K8 759 aa11.88□□□□□ -0.51
HDAC1-209ENST00000484305 DOLPP1Q86YN1 238 aa11.88□□□□□ -0.51
HDAC1-209ENST00000484305 CCDC116Q8IYX3 515 aa11.88□□□□□ -0.51
HDAC1-209ENST00000484305 TAGAPQ8N103 731 aa11.88□□□□□ -0.51
HDAC1-209ENST00000484305 LRRC25Q8N386 305 aaPredicted RBP11.88□□□□□ -0.51
HDAC1-209ENST00000484305 OR10G3Q8NGC4 313 aa11.88□□□□□ -0.51
HDAC1-209ENST00000484305 OR5M3Q8NGP4 307 aa11.88□□□□□ -0.51
HDAC1-209ENST00000484305 CTHRC1Q96CG8 243 aa11.88□□□□□ -0.51
HDAC1-209ENST00000484305 PHF12Q96QT6 1004 aa11.88□□□□□ -0.51
HDAC1-209ENST00000484305 MECRQ9BV79 373 aa11.88□□□□□ -0.51
HDAC1-209ENST00000484305 ZDHHC11Q9H8X9 412 aa11.88□□□□□ -0.51
HDAC1-209ENST00000484305 PROK2Q9HC23 129 aa11.88□□□□□ -0.51
HDAC1-209ENST00000484305 PLSCR2Q9NRY7 297 aa11.88□□□□□ -0.51
HDAC1-209ENST00000484305 SUCOQ9UBS9 1254 aaKnown RBP11.88□□□□□ -0.51
HDAC1-209ENST00000484305 MID2Q9UJV3 735 aa11.88□□□□□ -0.51
HDAC1-209ENST00000484305 CCL27Q9Y4X3 112 aa11.88□□□□□ -0.51
HDAC1-209ENST00000484305 NPFFR2Q9Y5X5 522 aa11.88□□□□□ -0.51
HDAC1-209ENST00000484305 PTGDR2Q9Y5Y4 395 aa11.88□□□□□ -0.51
HDAC1-209ENST00000484305 CACNA1DQ01668 2161 aa11.87□□□□□ -0.51
HDAC1-209ENST00000484305 ACOT7O00154 380 aa11.87□□□□□ -0.51
HDAC1-209ENST00000484305 CBX7O95931 251 aa11.87□□□□□ -0.51
HDAC1-209ENST00000484305 CELA3AP09093 270 aa11.87□□□□□ -0.51
HDAC1-209ENST00000484305 ESRRAP11474 423 aaPredicted RBP11.87□□□□□ -0.51
HDAC1-209ENST00000484305 CREB1P16220 341 aa11.87□□□□□ -0.51
HDAC1-209ENST00000484305 PCSK2P16519 638 aa11.87□□□□□ -0.51
HDAC1-209ENST00000484305 PTGS2P35354 604 aa11.87□□□□□ -0.51
HDAC1-209ENST00000484305 DCTP40126 519 aa11.87□□□□□ -0.51
HDAC1-209ENST00000484305 MAGEA5P43359 124 aa11.87□□□□□ -0.51
HDAC1-209ENST00000484305 FBXW4P57775 412 aa11.87□□□□□ -0.51
HDAC1-209ENST00000484305 MRPS35P82673 323 aaKnown RBP11.87□□□□□ -0.51
HDAC1-209ENST00000484305 ADORA2A-AS1P86434 159 aa11.87□□□□□ -0.51
HDAC1-209ENST00000484305 ZNF763Q0D2J5 394 aa11.87□□□□□ -0.51
HDAC1-209ENST00000484305 HEPACAMQ14CZ8 416 aa11.87□□□□□ -0.51
HDAC1-209ENST00000484305 IMPG1Q17R60 797 aa11.87□□□□□ -0.51
HDAC1-209ENST00000484305 PRSS53Q2L4Q9 553 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms