RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 TBC1D21Q8IYX1 336 aa4.64□□□□□ -1.67
SBDSP1-204ENST00000453858 KBTBD8Q8NFY9 601 aa4.64□□□□□ -1.67
SBDSP1-204ENST00000453858 OR9A4Q8NGU2 314 aa4.64□□□□□ -1.67
SBDSP1-204ENST00000453858 GATAD1Q8WUU5 269 aa4.64□□□□□ -1.67
SBDSP1-204ENST00000453858 SGCZQ96LD1 299 aa4.64□□□□□ -1.67
SBDSP1-204ENST00000453858 CSPG4P5Q96PW8 444 aa4.64□□□□□ -1.67
SBDSP1-204ENST00000453858 RASL10BQ96S79 203 aa4.64□□□□□ -1.67
SBDSP1-204ENST00000453858 ADOQ96SZ5 270 aa4.64□□□□□ -1.67
SBDSP1-204ENST00000453858 DRC3Q9H069 523 aa4.64□□□□□ -1.67
SBDSP1-204ENST00000453858 UBQLN3Q9H347 655 aa4.64□□□□□ -1.67
SBDSP1-204ENST00000453858 LIN28AQ9H9Z2 209 aaKnown RBP4.64□□□□□ -1.67
SBDSP1-204ENST00000453858 BPIFA1Q9NP55 256 aa4.64□□□□□ -1.67
SBDSP1-204ENST00000453858 NLRC4Q9NPP4 1024 aa4.64□□□□□ -1.67
SBDSP1-204ENST00000453858 LMBRD1Q9NUN5 540 aa4.64□□□□□ -1.67
SBDSP1-204ENST00000453858 PNPOQ9NVS9 261 aa4.64□□□□□ -1.67
SBDSP1-204ENST00000453858 SMOXQ9NWM0 555 aa4.64□□□□□ -1.67
SBDSP1-204ENST00000453858 HPF1Q9NWY4 346 aa4.64□□□□□ -1.67
SBDSP1-204ENST00000453858 CISD1Q9NZ45 108 aaKnown RBP4.64□□□□□ -1.67
SBDSP1-204ENST00000453858 CLCF1Q9UBD9 225 aa4.64□□□□□ -1.67
SBDSP1-204ENST00000453858 POLG2Q9UHN1 485 aa4.64□□□□□ -1.67
SBDSP1-204ENST00000453858 VPS13DQ5THJ4 4388 aa4.64□□□□□ -1.67
SBDSP1-204ENST00000453858 FAT2Q9NYQ8 4349 aa4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 A0A088AWK7 358 aa4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 A0A0U1RQJ8 604 aa4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 LOC390937A0A1W2PQ73 354 aa4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 C5orf63A6NC05 138 aa4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 DPRXA6NFQ7 191 aa4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 SAGE2PA6NJ88 616 aa4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 SHISA9B4DS77 424 aa4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 IFRD1O00458 451 aaPredicted RBP4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 CLOCKO15516 846 aa4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 PRPSAP2O60256 369 aa4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 TUSC2O75896 110 aa4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 AP2A1O95782 977 aa4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 OPN1MWP04001 364 aa4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 HPNP05981 417 aa4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 OPN1MW2P0DN77 364 aa4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 OPN1MW3P0DN78 364 aa4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 EPB41P11171 864 aaKnown RBP4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 CD9P21926 228 aa4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 PCMT1P22061 227 aa4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 HMGCLP35914 325 aa4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 PRLHRP49683 370 aa4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 NAGLUP54802 743 aa4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 ZNF844Q08AG5 666 aa4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 RPA4Q13156 261 aa4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 PKP1Q13835 747 aa4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 ZNF267Q14586 743 aaPredicted RBP4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 SLC39A14Q15043 492 aa4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 TAF9Q16594 264 aa4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 ERMARDQ5T6L9 678 aa4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 AGAP6Q5VW22 663 aa4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 ZNF529Q6P280 563 aa4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 RTL4Q6ZR62 310 aa4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 RFX8Q6ZV50 586 aa4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 PDSS2Q86YH6 399 aa4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 C2orf73Q8N5S3 287 aaPredicted RBP4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 KIR3DL3Q8N743 410 aa4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 OR5K2Q8NHB8 316 aa4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 MUC7Q8TAX7 377 aa4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 SLC35B2Q8TB61 432 aa4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 SYN2Q92777 582 aaPredicted RBP4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 UCN3Q969E3 161 aa4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 TMIGD2Q96BF3 282 aa4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 CTHRC1Q96CG8 243 aa4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 OR2A5Q96R48 311 aa4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 PACSIN1Q9BY11 444 aa4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 POLR1EQ9GZS1 481 aaKnown RBP4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 MAGEF1Q9HAY2 307 aa4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 NTN4Q9HB63 628 aa4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 UBE2TQ9NPD8 197 aaPredicted RBP4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 SACM1LQ9NTJ5 587 aa4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 FEZ2Q9UHY8 353 aaPredicted RBP4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 ZDHHC8Q9ULC8 765 aa4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 SLC6A5Q9Y345 797 aa4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 TSC22D4Q9Y3Q8 395 aa4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 ZNF711Q9Y462 761 aa4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 IKBKGQ9Y6K9 419 aa4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 SCN3AQ9NY46 2000 aa4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 HEATR5BQ9P2D3 2071 aa4.63□□□□□ -1.67
SBDSP1-204ENST00000453858 DNAH2Q9P225 4427 aa4.62□□□□□ -1.67
SBDSP1-204ENST00000453858 TRBV11-1A0A0K0K1C0 115 aa4.62□□□□□ -1.67
SBDSP1-204ENST00000453858 FAM170AA1A519 330 aa4.62□□□□□ -1.67
SBDSP1-204ENST00000453858 AGAP14A8MT82 685 aa4.62□□□□□ -1.67
SBDSP1-204ENST00000453858 VSTM5A8MXK1 200 aa4.62□□□□□ -1.67
SBDSP1-204ENST00000453858 CETN3O15182 167 aa4.62□□□□□ -1.67
SBDSP1-204ENST00000453858 P4HA2O15460 535 aa4.62□□□□□ -1.67
SBDSP1-204ENST00000453858 POLR2DO15514 142 aaKnown RBP4.62□□□□□ -1.67
SBDSP1-204ENST00000453858 P2RX6O15547 441 aa4.62□□□□□ -1.67
SBDSP1-204ENST00000453858 B3GALT2O43825 422 aa4.62□□□□□ -1.67
SBDSP1-204ENST00000453858 SLC43A1O75387 559 aa4.62□□□□□ -1.67
SBDSP1-204ENST00000453858 HAUS5O94927 633 aa4.62□□□□□ -1.67
SBDSP1-204ENST00000453858 NSA2O95478 260 aaKnown RBP4.62□□□□□ -1.67
SBDSP1-204ENST00000453858 ACSL3O95573 720 aa4.62□□□□□ -1.67
SBDSP1-204ENST00000453858 PRSS56P0CW18 603 aa4.62□□□□□ -1.67
SBDSP1-204ENST00000453858 OMGP23515 440 aa4.62□□□□□ -1.67
SBDSP1-204ENST00000453858 IL1R2P27930 398 aa4.62□□□□□ -1.67
SBDSP1-204ENST00000453858 TTKP33981 857 aa4.62□□□□□ -1.67
SBDSP1-204ENST00000453858 HCAR3P49019 387 aa4.62□□□□□ -1.67
SBDSP1-204ENST00000453858 PDLIM4P50479 330 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms