RNA–Protein interactions for RNA: ENST00000437813.7

TNFRSF1A-203, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 634 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-203ENST00000437813 PHF21BQ96EK2 531 aa13.21□□□□□ -0.29
TNFRSF1A-203ENST00000437813 SECISBP2Q96T21 854 aaKnown RBP13.21□□□□□ -0.29
TNFRSF1A-203ENST00000437813 ANGPTL4Q9BY76 406 aa13.21□□□□□ -0.29
TNFRSF1A-203ENST00000437813 VPS11Q9H270 941 aa13.21□□□□□ -0.29
TNFRSF1A-203ENST00000437813 CDC42EP4Q9H3Q1 356 aaKnown RBP13.21□□□□□ -0.29
TNFRSF1A-203ENST00000437813 FARSBQ9NSD9 589 aaKnown RBP13.21□□□□□ -0.29
TNFRSF1A-203ENST00000437813 XPR1Q9UBH6 696 aa13.21□□□□□ -0.29
TNFRSF1A-203ENST00000437813 ACAD8Q9UKU7 415 aa13.21□□□□□ -0.29
TNFRSF1A-203ENST00000437813 DTX4Q9Y2E6 619 aa13.21□□□□□ -0.29
TNFRSF1A-203ENST00000437813 DOCK7Q96N67 2140 aa13.21□□□□□ -0.3
TNFRSF1A-203ENST00000437813 C2orf92A0A1B0GVN3 265 aa13.2□□□□□ -0.3
TNFRSF1A-203ENST00000437813 HPNP05981 417 aa13.2□□□□□ -0.3
TNFRSF1A-203ENST00000437813 RBP1P09455 135 aa13.2□□□□□ -0.3
TNFRSF1A-203ENST00000437813 COL6A2P12110 1019 aa13.2□□□□□ -0.3
TNFRSF1A-203ENST00000437813 CPMP14384 443 aa13.2□□□□□ -0.3
TNFRSF1A-203ENST00000437813 GABRA1P14867 456 aa13.2□□□□□ -0.3
TNFRSF1A-203ENST00000437813 GPX3P22352 226 aa13.2□□□□□ -0.3
TNFRSF1A-203ENST00000437813 CEACAM8P31997 349 aaPredicted RBP13.2□□□□□ -0.3
TNFRSF1A-203ENST00000437813 DUSP2Q05923 314 aa13.2□□□□□ -0.3
TNFRSF1A-203ENST00000437813 SLC25A35Q3KQZ1 300 aa13.2□□□□□ -0.3
TNFRSF1A-203ENST00000437813 TBCELQ5QJ74 424 aa13.2□□□□□ -0.3
TNFRSF1A-203ENST00000437813 SLC48A1Q6P1K1 146 aa13.2□□□□□ -0.3
TNFRSF1A-203ENST00000437813 LETMD1Q6P1Q0 360 aa13.2□□□□□ -0.3
TNFRSF1A-203ENST00000437813 TMEM81Q6P7N7 255 aa13.2□□□□□ -0.3
TNFRSF1A-203ENST00000437813 GALNT12Q8IXK2 581 aa13.2□□□□□ -0.3
TNFRSF1A-203ENST00000437813 MMP21Q8N119 569 aa13.2□□□□□ -0.3
TNFRSF1A-203ENST00000437813 MMGT1Q8N4V1 131 aa13.2□□□□□ -0.3
TNFRSF1A-203ENST00000437813 NOA1Q8NC60 698 aaKnown RBP13.2□□□□□ -0.3
TNFRSF1A-203ENST00000437813 SIMC1Q8NDZ2 872 aa13.2□□□□□ -0.3
TNFRSF1A-203ENST00000437813 OR4F6Q8NGB9 312 aa13.2□□□□□ -0.3
TNFRSF1A-203ENST00000437813 TRPC4APQ8TEL6 797 aa13.2□□□□□ -0.3
TNFRSF1A-203ENST00000437813 ZNF483Q8TF39 744 aaPredicted RBP13.2□□□□□ -0.3
TNFRSF1A-203ENST00000437813 PAFAH2Q99487 392 aa13.2□□□□□ -0.3
TNFRSF1A-203ENST00000437813 DOHHQ9BU89 302 aa13.2□□□□□ -0.3
TNFRSF1A-203ENST00000437813 WDR41Q9HAD4 459 aa13.2□□□□□ -0.3
TNFRSF1A-203ENST00000437813 ZNF180Q9UJW8 692 aa13.2□□□□□ -0.3
TNFRSF1A-203ENST00000437813 ITGB1BP2Q9UKP3 347 aa13.2□□□□□ -0.3
TNFRSF1A-203ENST00000437813 TMCO1Q9UM00 188 aa13.2□□□□□ -0.3
TNFRSF1A-203ENST00000437813 NPFFR2Q9Y5X5 522 aa13.2□□□□□ -0.3
TNFRSF1A-203ENST00000437813 MPDZO75970 2070 aa13.2□□□□□ -0.3
TNFRSF1A-203ENST00000437813 ATP1B1P05026 303 aa13.19□□□□□ -0.3
TNFRSF1A-203ENST00000437813 KLK1P06870 262 aa13.19□□□□□ -0.3
TNFRSF1A-203ENST00000437813 PIK3R1P27986 724 aa13.19□□□□□ -0.3
TNFRSF1A-203ENST00000437813 PHBP35232 272 aa13.19□□□□□ -0.3
TNFRSF1A-203ENST00000437813 PTGDSP41222 190 aa13.19□□□□□ -0.3
TNFRSF1A-203ENST00000437813 CASP3P42574 277 aa13.19□□□□□ -0.3
TNFRSF1A-203ENST00000437813 CDK9P50750 372 aaKnown RBP13.19□□□□□ -0.3
TNFRSF1A-203ENST00000437813 XKP51811 444 aa13.19□□□□□ -0.3
TNFRSF1A-203ENST00000437813 CCNG1P51959 295 aa13.19□□□□□ -0.3
TNFRSF1A-203ENST00000437813 RIPPLY3P57055 190 aa13.19□□□□□ -0.3
TNFRSF1A-203ENST00000437813 MAP4K2Q12851 820 aa13.19□□□□□ -0.3
TNFRSF1A-203ENST00000437813 UAP1Q16222 522 aaPredicted RBP13.19□□□□□ -0.3
TNFRSF1A-203ENST00000437813 PRICKLE4Q2TBC4 344 aa13.19□□□□□ -0.3
TNFRSF1A-203ENST00000437813 FBXL19-AS1Q494R0 122 aa13.19□□□□□ -0.3
TNFRSF1A-203ENST00000437813 ACSF3Q4G176 576 aaPredicted RBP13.19□□□□□ -0.3
TNFRSF1A-203ENST00000437813 NHSL2Q5HYW2 709 aa13.19□□□□□ -0.3
TNFRSF1A-203ENST00000437813 COMMD6Q7Z4G1 85 aa13.19□□□□□ -0.3
TNFRSF1A-203ENST00000437813 TAGAPQ8N103 731 aa13.19□□□□□ -0.3
TNFRSF1A-203ENST00000437813 MYRIPQ8NFW9 859 aa13.19□□□□□ -0.3
TNFRSF1A-203ENST00000437813 OR7G1Q8NGA0 311 aa13.19□□□□□ -0.3
TNFRSF1A-203ENST00000437813 OR4K14Q8NGD5 310 aa13.19□□□□□ -0.3
TNFRSF1A-203ENST00000437813 OR10Q1Q8NGQ4 319 aa13.19□□□□□ -0.3
TNFRSF1A-203ENST00000437813 ANP32BQ92688 251 aaKnown RBP13.19□□□□□ -0.3
TNFRSF1A-203ENST00000437813 ZNF597Q96LX8 424 aa13.19□□□□□ -0.3
TNFRSF1A-203ENST00000437813 ZNF681Q96N22 645 aa13.19□□□□□ -0.3
TNFRSF1A-203ENST00000437813 RILPQ96NA2 401 aa13.19□□□□□ -0.3
TNFRSF1A-203ENST00000437813 TIMP4Q99727 224 aa13.19□□□□□ -0.3
TNFRSF1A-203ENST00000437813 SH3GL2Q99962 352 aa13.19□□□□□ -0.3
TNFRSF1A-203ENST00000437813 PRDM14Q9GZV8 571 aa13.19□□□□□ -0.3
TNFRSF1A-203ENST00000437813 NXF5Q9H1B4 397 aaKnown RBP13.19□□□□□ -0.3
TNFRSF1A-203ENST00000437813 OR10A5Q9H207 317 aa13.19□□□□□ -0.3
TNFRSF1A-203ENST00000437813 LDAHQ9H6V9 325 aa13.19□□□□□ -0.3
TNFRSF1A-203ENST00000437813 MAT2BQ9NZL9 334 aa13.19□□□□□ -0.3
TNFRSF1A-203ENST00000437813 C15orf41Q9Y2V0 281 aa13.19□□□□□ -0.3
TNFRSF1A-203ENST00000437813 PCDHA9Q9Y5H5 950 aa13.19□□□□□ -0.3
TNFRSF1A-203ENST00000437813 ZFHX3Q15911 3703 aa13.18□□□□□ -0.3
TNFRSF1A-203ENST00000437813 A8MT66 165 aa13.18□□□□□ -0.3
TNFRSF1A-203ENST00000437813 CTAG2O75638 210 aa13.18□□□□□ -0.3
TNFRSF1A-203ENST00000437813 SNX4O95219 450 aa13.18□□□□□ -0.3
TNFRSF1A-203ENST00000437813 ACSL3O95573 720 aa13.18□□□□□ -0.3
TNFRSF1A-203ENST00000437813 EPPINO95925 133 aa13.18□□□□□ -0.3
TNFRSF1A-203ENST00000437813 CBX7O95931 251 aa13.18□□□□□ -0.3
TNFRSF1A-203ENST00000437813 ABCB1P08183 1280 aaPredicted RBP13.18□□□□□ -0.3
TNFRSF1A-203ENST00000437813 PORP16435 677 aaPredicted RBP13.18□□□□□ -0.3
TNFRSF1A-203ENST00000437813 ABCD3P28288 659 aa13.18□□□□□ -0.3
TNFRSF1A-203ENST00000437813 GCAP28676 217 aa13.18□□□□□ -0.3
TNFRSF1A-203ENST00000437813 TRPC1P48995 793 aa13.18□□□□□ -0.3
TNFRSF1A-203ENST00000437813 SERPINB9P50453 376 aa13.18□□□□□ -0.3
TNFRSF1A-203ENST00000437813 CKAP4Q07065 602 aaKnown RBP13.18□□□□□ -0.3
TNFRSF1A-203ENST00000437813 TSNAXIP1Q2TAA8 658 aa13.18□□□□□ -0.3
TNFRSF1A-203ENST00000437813 VASNQ6EMK4 673 aa13.18□□□□□ -0.3
TNFRSF1A-203ENST00000437813 DESI1Q6ICB0 168 aa13.18□□□□□ -0.3
TNFRSF1A-203ENST00000437813 CLYBLQ8N0X4 340 aa13.18□□□□□ -0.3
TNFRSF1A-203ENST00000437813 NRGNQ92686 78 aa13.18□□□□□ -0.3
TNFRSF1A-203ENST00000437813 DIO2Q92813 273 aa13.18□□□□□ -0.3
TNFRSF1A-203ENST00000437813 HGDQ93099 445 aa13.18□□□□□ -0.3
TNFRSF1A-203ENST00000437813 TM4SF18Q96CE8 201 aa13.18□□□□□ -0.3
TNFRSF1A-203ENST00000437813 C11orf24Q96F05 449 aaPredicted RBP13.18□□□□□ -0.3
TNFRSF1A-203ENST00000437813 MRPL57Q9BQC6 102 aaKnown RBP13.18□□□□□ -0.3
TNFRSF1A-203ENST00000437813 ZNF559Q9BR84 538 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms