RNA–Protein interactions for RNA: ENST00000431611.5

CSNK1E-208, Transcript of casein kinase 1 epsilon, human

TSL 5

Gene CSNK1E, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1E-208	ENST00000431611	MTRF1L	Q9UGC7	380 aa	Known RBP	13.87	□□□□□ -0.19
CSNK1E-208	ENST00000431611	IKBKG	Q9Y6K9	419 aa		13.87	□□□□□ -0.19
CSNK1E-208	ENST00000431611	DNAJC13	O75165	2243 aa		13.87	□□□□□ -0.19
CSNK1E-208	ENST00000431611	MED13L	Q71F56	2210 aa		13.86	□□□□□ -0.19
CSNK1E-208	ENST00000431611	HMX2	A2RU54	273 aa		13.86	□□□□□ -0.19
CSNK1E-208	ENST00000431611	KDM4E	B2RXH2	506 aa	Predicted RBP	13.86	□□□□□ -0.19
CSNK1E-208	ENST00000431611	SEMA3D	O95025	777 aa		13.86	□□□□□ -0.19
CSNK1E-208	ENST00000431611	IL2RA	P01589	272 aa		13.86	□□□□□ -0.19
CSNK1E-208	ENST00000431611	HPN	P05981	417 aa		13.86	□□□□□ -0.19
CSNK1E-208	ENST00000431611	CT62	P0C5K7	136 aa		13.86	□□□□□ -0.19
CSNK1E-208	ENST00000431611	NT5E	P21589	574 aa		13.86	□□□□□ -0.19
CSNK1E-208	ENST00000431611	TYK2	P29597	1187 aa		13.86	□□□□□ -0.19
CSNK1E-208	ENST00000431611	TIMP3	P35625	211 aa		13.86	□□□□□ -0.19
CSNK1E-208	ENST00000431611	FUT7	Q11130	342 aa		13.86	□□□□□ -0.19
CSNK1E-208	ENST00000431611	TOMM20	Q15388	145 aa		13.86	□□□□□ -0.19
CSNK1E-208	ENST00000431611	SF3B4	Q15427	424 aa	Known RBP eCLIP	13.86	□□□□□ -0.19	3e-18	■■■■□ 21.6
CSNK1E-208	ENST00000431611	UAP1	Q16222	522 aa	Predicted RBP	13.86	□□□□□ -0.19
CSNK1E-208	ENST00000431611	FBXL19-AS1	Q494R0	122 aa		13.86	□□□□□ -0.19
CSNK1E-208	ENST00000431611	FLYWCH1	Q4VC44	716 aa		13.86	□□□□□ -0.19
CSNK1E-208	ENST00000431611	C6orf163	Q5TEZ5	329 aa		13.86	□□□□□ -0.19
CSNK1E-208	ENST00000431611	VASN	Q6EMK4	673 aa		13.86	□□□□□ -0.19
CSNK1E-208	ENST00000431611	ZNF615	Q8N8J6	731 aa		13.86	□□□□□ -0.19
CSNK1E-208	ENST00000431611	OR4K14	Q8NGD5	310 aa		13.86	□□□□□ -0.19
CSNK1E-208	ENST00000431611	GOT1L1	Q8NHS2	421 aa	Predicted RBP	13.86	□□□□□ -0.19
CSNK1E-208	ENST00000431611	FAM222B	Q8WU58	562 aa		13.86	□□□□□ -0.19
CSNK1E-208	ENST00000431611	ADIPOR1	Q96A54	375 aa		13.86	□□□□□ -0.19
CSNK1E-208	ENST00000431611	RMND5B	Q96G75	393 aa	Predicted RBP	13.86	□□□□□ -0.19
CSNK1E-208	ENST00000431611	GPR78	Q96P69	363 aa		13.86	□□□□□ -0.19
CSNK1E-208	ENST00000431611	CDK15	Q96Q40	435 aa		13.86	□□□□□ -0.19
CSNK1E-208	ENST00000431611	SH3GL2	Q99962	352 aa		13.86	□□□□□ -0.19
CSNK1E-208	ENST00000431611	PRDM14	Q9GZV8	571 aa		13.86	□□□□□ -0.19
CSNK1E-208	ENST00000431611	OR10A5	Q9H207	317 aa		13.86	□□□□□ -0.19
CSNK1E-208	ENST00000431611	UBQLN3	Q9H347	655 aa		13.86	□□□□□ -0.19
CSNK1E-208	ENST00000431611	NOL11	Q9H8H0	719 aa	Known RBP	13.86	□□□□□ -0.19
CSNK1E-208	ENST00000431611	FOXD3	Q9UJU5	478 aa	Predicted RBP	13.86	□□□□□ -0.19
CSNK1E-208	ENST00000431611	EDAR	Q9UNE0	448 aa		13.86	□□□□□ -0.19
CSNK1E-208	ENST00000431611	C15orf41	Q9Y2V0	281 aa		13.86	□□□□□ -0.19
CSNK1E-208	ENST00000431611	SLC6A5	Q9Y345	797 aa		13.86	□□□□□ -0.19
CSNK1E-208	ENST00000431611	SPG11	Q96JI7	2443 aa		13.86	□□□□□ -0.19
CSNK1E-208	ENST00000431611		A6NNC1	897 aa		13.85	□□□□□ -0.19
CSNK1E-208	ENST00000431611	OR7A17	O14581	309 aa		13.85	□□□□□ -0.19
CSNK1E-208	ENST00000431611	KLK1	P06870	262 aa		13.85	□□□□□ -0.19
CSNK1E-208	ENST00000431611	KRT15	P19012	456 aa		13.85	□□□□□ -0.19
CSNK1E-208	ENST00000431611	DNASE1	P24855	282 aa		13.85	□□□□□ -0.19
CSNK1E-208	ENST00000431611	CASP3	P42574	277 aa		13.85	□□□□□ -0.19
CSNK1E-208	ENST00000431611	SERPINB8	P50452	374 aa		13.85	□□□□□ -0.19
CSNK1E-208	ENST00000431611	XK	P51811	444 aa		13.85	□□□□□ -0.19
CSNK1E-208	ENST00000431611	CEBPE	Q15744	281 aa		13.85	□□□□□ -0.19
CSNK1E-208	ENST00000431611	KRTAP21-3	Q3LHN1	58 aa		13.85	□□□□□ -0.19
CSNK1E-208	ENST00000431611	FNDC7	Q5VTL7	733 aa		13.85	□□□□□ -0.19
CSNK1E-208	ENST00000431611	NSUN5P2	Q63ZY6	315 aa		13.85	□□□□□ -0.19
CSNK1E-208	ENST00000431611	FRG2	Q64ET8	278 aa		13.85	□□□□□ -0.19
CSNK1E-208	ENST00000431611	POMZP3	Q6PJE2	187 aa		13.85	□□□□□ -0.19
CSNK1E-208	ENST00000431611	CDC20B	Q86Y33	519 aa		13.85	□□□□□ -0.19
CSNK1E-208	ENST00000431611	TGIF2LY	Q8IUE0	185 aa		13.85	□□□□□ -0.19
CSNK1E-208	ENST00000431611	PRR22	Q8IZ63	422 aa		13.85	□□□□□ -0.19
CSNK1E-208	ENST00000431611	PTGR2	Q8N8N7	351 aa	Predicted RBP	13.85	□□□□□ -0.19
CSNK1E-208	ENST00000431611	C17orf47	Q8NEP4	570 aa		13.85	□□□□□ -0.19
CSNK1E-208	ENST00000431611	OR7G1	Q8NGA0	311 aa		13.85	□□□□□ -0.19
CSNK1E-208	ENST00000431611	OR52B6	Q8NGF0	335 aa		13.85	□□□□□ -0.19
CSNK1E-208	ENST00000431611	HSPBAP1	Q96EW2	488 aa		13.85	□□□□□ -0.19
CSNK1E-208	ENST00000431611	FRG2B	Q96QU4	278 aa		13.85	□□□□□ -0.19
CSNK1E-208	ENST00000431611	VPS11	Q9H270	941 aa		13.85	□□□□□ -0.19
CSNK1E-208	ENST00000431611	AHSP	Q9NZD4	102 aa		13.85	□□□□□ -0.19
CSNK1E-208	ENST00000431611	CAMK2A	Q9UQM7	478 aa		13.85	□□□□□ -0.19
CSNK1E-208	ENST00000431611	SETD2	Q9BYW2	2564 aa	Predicted RBP	13.84	□□□□□ -0.19
CSNK1E-208	ENST00000431611	EML6	Q6ZMW3	1958 aa		13.84	□□□□□ -0.19
CSNK1E-208	ENST00000431611	CD8B2	A6NJW9	211 aa		13.84	□□□□□ -0.19
CSNK1E-208	ENST00000431611	CDH16	O75309	829 aa		13.84	□□□□□ -0.19
CSNK1E-208	ENST00000431611	ALDOA	P04075	364 aa	Known RBP	13.84	□□□□□ -0.19
CSNK1E-208	ENST00000431611	CPM	P14384	443 aa		13.84	□□□□□ -0.19
CSNK1E-208	ENST00000431611	POR	P16435	677 aa	Predicted RBP	13.84	□□□□□ -0.19
CSNK1E-208	ENST00000431611	ABCD3	P28288	659 aa		13.84	□□□□□ -0.19
CSNK1E-208	ENST00000431611	CCNG1	P51959	295 aa		13.84	□□□□□ -0.19
CSNK1E-208	ENST00000431611	ZNF136	P52737	540 aa		13.84	□□□□□ -0.19
CSNK1E-208	ENST00000431611	PPP2R2A	P63151	447 aa		13.84	□□□□□ -0.19
CSNK1E-208	ENST00000431611	TECRL	Q5HYJ1	363 aa		13.84	□□□□□ -0.19
CSNK1E-208	ENST00000431611	NHSL2	Q5HYW2	709 aa		13.84	□□□□□ -0.19
CSNK1E-208	ENST00000431611	CCNYL2	Q5T2Q4	361 aa		13.84	□□□□□ -0.19
CSNK1E-208	ENST00000431611	TTC19	Q6DKK2	380 aa	Predicted RBP	13.84	□□□□□ -0.19
CSNK1E-208	ENST00000431611	PAGE2	Q7Z2X7	111 aa		13.84	□□□□□ -0.19
CSNK1E-208	ENST00000431611	PHF21B	Q96EK2	531 aa		13.84	□□□□□ -0.19
CSNK1E-208	ENST00000431611	TMEM41A	Q96HV5	264 aa		13.84	□□□□□ -0.19
CSNK1E-208	ENST00000431611	TRIB1	Q96RU8	372 aa		13.84	□□□□□ -0.19
CSNK1E-208	ENST00000431611	NTMT1	Q9BV86	223 aa		13.84	□□□□□ -0.19
CSNK1E-208	ENST00000431611	UGT2B28	Q9BY64	529 aa		13.84	□□□□□ -0.19
CSNK1E-208	ENST00000431611	MRPL1	Q9BYD6	325 aa	Known RBP	13.84	□□□□□ -0.19
CSNK1E-208	ENST00000431611	EPB41L4B	Q9H329	900 aa		13.84	□□□□□ -0.19
CSNK1E-208	ENST00000431611	ADAM29	Q9UKF5	820 aa		13.84	□□□□□ -0.19
CSNK1E-208	ENST00000431611	CBLC	Q9ULV8	474 aa		13.84	□□□□□ -0.19
CSNK1E-208	ENST00000431611	PLEKHA6	Q9Y2H5	1048 aa		13.84	□□□□□ -0.19
CSNK1E-208	ENST00000431611	MTOR	P42345	2549 aa		13.83	□□□□□ -0.2
CSNK1E-208	ENST00000431611	GNB5	O14775	395 aa		13.83	□□□□□ -0.2
CSNK1E-208	ENST00000431611	ABCB1	P08183	1280 aa	Predicted RBP	13.83	□□□□□ -0.2
CSNK1E-208	ENST00000431611	NAGA	P17050	411 aa		13.83	□□□□□ -0.2
CSNK1E-208	ENST00000431611	BMP7	P18075	431 aa		13.83	□□□□□ -0.2
CSNK1E-208	ENST00000431611	KLK2	P20151	261 aa		13.83	□□□□□ -0.2
CSNK1E-208	ENST00000431611	GPX3	P22352	226 aa		13.83	□□□□□ -0.2
CSNK1E-208	ENST00000431611	CASQ1	P31415	396 aa		13.83	□□□□□ -0.2
CSNK1E-208	ENST00000431611	PHB	P35232	272 aa		13.83	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms