RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 KRT80Q6KB66 452 aa14.21□□□□□ -0.13
SCAF11-204ENST00000395454 SLC48A1Q6P1K1 146 aa14.21□□□□□ -0.13
SCAF11-204ENST00000395454 RNF44Q7L0R7 432 aa14.21□□□□□ -0.13
SCAF11-204ENST00000395454 GALNT10Q86SR1 603 aa14.21□□□□□ -0.13
SCAF11-204ENST00000395454 KMT5CQ86Y97 462 aa14.21□□□□□ -0.13
SCAF11-204ENST00000395454 KLHL6Q8WZ60 621 aa14.21□□□□□ -0.13
SCAF11-204ENST00000395454 EXOSC8Q96B26 276 aaKnown RBP14.21□□□□□ -0.13
SCAF11-204ENST00000395454 TAMM41Q96BW9 452 aa14.21□□□□□ -0.13
SCAF11-204ENST00000395454 MACROD1Q9BQ69 325 aa14.21□□□□□ -0.13
SCAF11-204ENST00000395454 MRPS26Q9BYN8 205 aaKnown RBP14.21□□□□□ -0.13
SCAF11-204ENST00000395454 SEMA5BQ9P283 1151 aa14.21□□□□□ -0.13
SCAF11-204ENST00000395454 C5AR2Q9P296 337 aa14.21□□□□□ -0.13
SCAF11-204ENST00000395454 MAGED1Q9Y5V3 778 aaPredicted RBP14.21□□□□□ -0.13
SCAF11-204ENST00000395454 FREM2Q5SZK8 3169 aa14.21□□□□□ -0.13
SCAF11-204ENST00000395454 SPTBP11277 2137 aa14.21□□□□□ -0.13
SCAF11-204ENST00000395454 A0A0G2JN53 185 aa14.21□□□□□ -0.14
SCAF11-204ENST00000395454 TRIM64CA6NLI5 447 aa14.21□□□□□ -0.14
SCAF11-204ENST00000395454 PROM1O43490 865 aa14.21□□□□□ -0.14
SCAF11-204ENST00000395454 AIFM1O95831 613 aa14.21□□□□□ -0.14
SCAF11-204ENST00000395454 SLC35G6P0C7Q6 338 aa14.21□□□□□ -0.14
SCAF11-204ENST00000395454 CERS1P27544 350 aa14.21□□□□□ -0.14
SCAF11-204ENST00000395454 CSTF2P33240 577 aaKnown RBP eCLIP14.21□□□□□ -0.14
SCAF11-204ENST00000395454 SOAT1P35610 550 aa14.21□□□□□ -0.14
SCAF11-204ENST00000395454 PRIM2P49643 509 aa14.21□□□□□ -0.14
SCAF11-204ENST00000395454 CDK9P50750 372 aaKnown RBP14.21□□□□□ -0.14
SCAF11-204ENST00000395454 TRA2AQ13595 282 aaKnown RBP eCLIP14.21□□□□□ -0.14
SCAF11-204ENST00000395454 ISXQ2M1V0 245 aa14.21□□□□□ -0.14
SCAF11-204ENST00000395454 CDCP2Q5VXM1 449 aa14.21□□□□□ -0.14
SCAF11-204ENST00000395454 TSEN54Q7Z6J9 526 aaKnown RBP14.21□□□□□ -0.14
SCAF11-204ENST00000395454 OR10Q1Q8NGQ4 319 aa14.21□□□□□ -0.14
SCAF11-204ENST00000395454 SUN3Q8TAQ9 357 aa14.21□□□□□ -0.14
SCAF11-204ENST00000395454 SFXN5Q8TD22 340 aa14.21□□□□□ -0.14
SCAF11-204ENST00000395454 UTP15Q8TED0 518 aaKnown RBP14.21□□□□□ -0.14
SCAF11-204ENST00000395454 SLC41A2Q96JW4 573 aa14.21□□□□□ -0.14
SCAF11-204ENST00000395454 ZFYVE21Q9BQ24 234 aa14.21□□□□□ -0.14
SCAF11-204ENST00000395454 GLIPR2Q9H4G4 154 aa14.21□□□□□ -0.14
SCAF11-204ENST00000395454 THSD1Q9NS62 852 aa14.21□□□□□ -0.14
SCAF11-204ENST00000395454 THUMPD1Q9NXG2 353 aaKnown RBP14.21□□□□□ -0.14
SCAF11-204ENST00000395454 ANGPT4Q9Y264 503 aa14.21□□□□□ -0.14
SCAF11-204ENST00000395454 MAP4K5Q9Y4K4 846 aa14.21□□□□□ -0.14
SCAF11-204ENST00000395454 GNGT2O14610 69 aa14.2□□□□□ -0.14
SCAF11-204ENST00000395454 CSO75390 466 aaKnown RBP14.2□□□□□ -0.14
SCAF11-204ENST00000395454 TFAP2AP05549 437 aa14.2□□□□□ -0.14
SCAF11-204ENST00000395454 PABPC4LP0CB38 370 aaKnown RBP14.2□□□□□ -0.14
SCAF11-204ENST00000395454 FPR1P21462 350 aa14.2□□□□□ -0.14
SCAF11-204ENST00000395454 CCKBRP32239 447 aa14.2□□□□□ -0.14
SCAF11-204ENST00000395454 RFX4Q33E94 735 aa14.2□□□□□ -0.14
SCAF11-204ENST00000395454 MANEAQ5SRI9 462 aa14.2□□□□□ -0.14
SCAF11-204ENST00000395454 FOXB2Q5VYV0 432 aa14.2□□□□□ -0.14
SCAF11-204ENST00000395454 ANGPTL8Q6UXH0 198 aa14.2□□□□□ -0.14
SCAF11-204ENST00000395454 D2HGDHQ8N465 521 aa14.2□□□□□ -0.14
SCAF11-204ENST00000395454 METTL25Q8N6Q8 603 aa14.2□□□□□ -0.14
SCAF11-204ENST00000395454 KCT2Q8NC54 265 aa14.2□□□□□ -0.14
SCAF11-204ENST00000395454 NFKBIDQ8NI38 313 aa14.2□□□□□ -0.14
SCAF11-204ENST00000395454 UCN3Q969E3 161 aa14.2□□□□□ -0.14
SCAF11-204ENST00000395454 DEPDC7Q96QD5 511 aa14.2□□□□□ -0.14
SCAF11-204ENST00000395454 STRADBQ9C0K7 418 aa14.2□□□□□ -0.14
SCAF11-204ENST00000395454 DLL3Q9NYJ7 618 aa14.2□□□□□ -0.14
SCAF11-204ENST00000395454 TMEFF2Q9UIK5 374 aaPredicted RBP14.2□□□□□ -0.14
SCAF11-204ENST00000395454 MYRFQ9Y2G1 1151 aa14.2□□□□□ -0.14
SCAF11-204ENST00000395454 CELSR3Q9NYQ7 3312 aa14.19□□□□□ -0.14
SCAF11-204ENST00000395454 P2RX6O15547 441 aa14.19□□□□□ -0.14
SCAF11-204ENST00000395454 HCRTR1O43613 425 aa14.19□□□□□ -0.14
SCAF11-204ENST00000395454 IFNA14P01570 189 aa14.19□□□□□ -0.14
SCAF11-204ENST00000395454 ALBP02768 609 aa14.19□□□□□ -0.14
SCAF11-204ENST00000395454 TFPTP0C1Z6 253 aa14.19□□□□□ -0.14
SCAF11-204ENST00000395454 NTSP30990 170 aa14.19□□□□□ -0.14
SCAF11-204ENST00000395454 DNAJA1P31689 397 aaKnown RBP14.19□□□□□ -0.14
SCAF11-204ENST00000395454 REEP3Q6NUK4 255 aa14.19□□□□□ -0.14
SCAF11-204ENST00000395454 FAM180BQ6P0A1 224 aa14.19□□□□□ -0.14
SCAF11-204ENST00000395454 CEACAM20Q6UY09 585 aa14.19□□□□□ -0.14
SCAF11-204ENST00000395454 C6orf120Q7Z4R8 191 aa14.19□□□□□ -0.14
SCAF11-204ENST00000395454 ZC3H7AQ8IWR0 971 aaKnown RBP14.19□□□□□ -0.14
SCAF11-204ENST00000395454 AGBL5Q8NDL9 886 aa14.19□□□□□ -0.14
SCAF11-204ENST00000395454 MIPOL1Q8TD10 442 aa14.19□□□□□ -0.14
SCAF11-204ENST00000395454 RERGQ96A58 199 aaPredicted RBP14.19□□□□□ -0.14
SCAF11-204ENST00000395454 MOAP1Q96BY2 351 aa14.19□□□□□ -0.14
SCAF11-204ENST00000395454 CNRIP1Q96F85 164 aaPredicted RBP14.19□□□□□ -0.14
SCAF11-204ENST00000395454 RMND5BQ96G75 393 aaPredicted RBP14.19□□□□□ -0.14
SCAF11-204ENST00000395454 FBXL20Q96IG2 436 aa14.19□□□□□ -0.14
SCAF11-204ENST00000395454 ZNF681Q96N22 645 aa14.19□□□□□ -0.14
SCAF11-204ENST00000395454 MBOAT4Q96T53 435 aa14.19□□□□□ -0.14
SCAF11-204ENST00000395454 CMKLR1Q99788 373 aa14.19□□□□□ -0.14
SCAF11-204ENST00000395454 TMEM121BQ9BXQ6 578 aaPredicted RBP14.19□□□□□ -0.14
SCAF11-204ENST00000395454 AKAP7Q9P0M2 348 aaPredicted RBP14.19□□□□□ -0.14
SCAF11-204ENST00000395454 SNX8Q9Y5X2 465 aa14.19□□□□□ -0.14
SCAF11-204ENST00000395454 URADA6NGE7 173 aa14.19□□□□□ -0.14
SCAF11-204ENST00000395454 HMGN4O00479 90 aa14.19□□□□□ -0.14
SCAF11-204ENST00000395454 STATHP02808 62 aa14.19□□□□□ -0.14
SCAF11-204ENST00000395454 EIF2S1P05198 315 aaKnown RBP14.19□□□□□ -0.14
SCAF11-204ENST00000395454 FOLR1P15328 257 aa14.19□□□□□ -0.14
SCAF11-204ENST00000395454 RPL5P46777 297 aaKnown RBP14.19□□□□□ -0.14
SCAF11-204ENST00000395454 CCT3P49368 545 aaKnown RBP14.19□□□□□ -0.14
SCAF11-204ENST00000395454 RAB8AP61006 207 aa14.19□□□□□ -0.14
SCAF11-204ENST00000395454 TUBA4AP68366 448 aa14.19□□□□□ -0.14
SCAF11-204ENST00000395454 HSPB3Q12988 150 aa14.19□□□□□ -0.14
SCAF11-204ENST00000395454 MAPK11Q15759 364 aa14.19□□□□□ -0.14
SCAF11-204ENST00000395454 LIN52Q52LA3 116 aa14.19□□□□□ -0.14
SCAF11-204ENST00000395454 FRMPD2BQ6IN97 320 aa14.19□□□□□ -0.14
SCAF11-204ENST00000395454 HS3ST5Q8IZT8 346 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms