RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 PHOX2BQ99453 314 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 GPA33Q99795 319 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 GDF15Q99988 308 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 AIF1LQ9BQI0 150 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 MENTQ9BUN1 341 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 ACAT2Q9BWD1 397 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 PITHD1Q9GZP4 211 aaPredicted RBP8.23□□□□□ -1.09
CLK1-201ENST00000321356 TMEM245Q9H330 911 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 BCL2L10Q9HD36 194 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 ISYNA1Q9NPH2 558 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 PAK6Q9NQU5 681 aaPredicted RBP8.23□□□□□ -1.09
CLK1-201ENST00000321356 CUEDC1Q9NWM3 386 aaPredicted RBP8.23□□□□□ -1.09
CLK1-201ENST00000321356 TEX10Q9NXF1 929 aaPredicted RBP8.23□□□□□ -1.09
CLK1-201ENST00000321356 TVP23BQ9NYZ1 205 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 C5AR2Q9P296 337 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 P2RX2Q9UBL9 471 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 TAC3Q9UHF0 121 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 ADAM29Q9UKF5 820 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 SF3B6Q9Y3B4 125 aaKnown RBP8.23□□□□□ -1.09
CLK1-201ENST00000321356 HCFC2Q9Y5Z7 792 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 MEIOCA2RUB1 952 aa8.22□□□□□ -1.09
CLK1-201ENST00000321356 M0R3H8 397 aa8.22□□□□□ -1.09
CLK1-201ENST00000321356 NDUFS4O43181 175 aa8.22□□□□□ -1.09
CLK1-201ENST00000321356 CSF3P09919 207 aa8.22□□□□□ -1.09
CLK1-201ENST00000321356 OR12D1P0DN82 309 aa8.22□□□□□ -1.09
CLK1-201ENST00000321356 ZNF24P17028 368 aa8.22□□□□□ -1.09
CLK1-201ENST00000321356 AZGP1P25311 298 aaKnown RBP8.22□□□□□ -1.09
CLK1-201ENST00000321356 WEE1P30291 646 aa8.22□□□□□ -1.09
CLK1-201ENST00000321356 SLC9A3P48764 834 aa8.22□□□□□ -1.09
CLK1-201ENST00000321356 MAN2A2P49641 1150 aa8.22□□□□□ -1.09
CLK1-201ENST00000321356 WNT4P56705 351 aa8.22□□□□□ -1.09
CLK1-201ENST00000321356 HNRNPA0Q13151 305 aaKnown RBP8.22□□□□□ -1.09
CLK1-201ENST00000321356 TPBGQ13641 420 aa8.22□□□□□ -1.09
CLK1-201ENST00000321356 DUSP6Q16828 381 aa8.22□□□□□ -1.09
CLK1-201ENST00000321356 KLHL22Q53GT1 634 aa8.22□□□□□ -1.09
CLK1-201ENST00000321356 ARHGAP15Q53QZ3 475 aa8.22□□□□□ -1.09
CLK1-201ENST00000321356 ATAT1Q5SQI0 421 aa8.22□□□□□ -1.09
CLK1-201ENST00000321356 CD200R1LQ6Q8B3 271 aa8.22□□□□□ -1.09
CLK1-201ENST00000321356 USP30Q70CQ3 517 aa8.22□□□□□ -1.09
CLK1-201ENST00000321356 UBE3DQ7Z6J8 389 aa8.22□□□□□ -1.09
CLK1-201ENST00000321356 NUDT13Q86X67 352 aa8.22□□□□□ -1.09
CLK1-201ENST00000321356 RDH10Q8IZV5 341 aa8.22□□□□□ -1.09
CLK1-201ENST00000321356 C2orf73Q8N5S3 287 aaPredicted RBP8.22□□□□□ -1.09
CLK1-201ENST00000321356 TMIEQ8NEW7 156 aa8.22□□□□□ -1.09
CLK1-201ENST00000321356 LILRB4Q8NHJ6 448 aa8.22□□□□□ -1.09
CLK1-201ENST00000321356 BBS10Q8TAM1 723 aa8.22□□□□□ -1.09
CLK1-201ENST00000321356 WFIKKN2Q8TEU8 576 aa8.22□□□□□ -1.09
CLK1-201ENST00000321356 TM9SF4Q92544 642 aa8.22□□□□□ -1.09
CLK1-201ENST00000321356 EXOSC8Q96B26 276 aaKnown RBP8.22□□□□□ -1.09
CLK1-201ENST00000321356 COX14Q96I36 57 aa8.22□□□□□ -1.09
CLK1-201ENST00000321356 LRR1Q96L50 414 aa8.22□□□□□ -1.09
CLK1-201ENST00000321356 AMDHD1Q96NU7 426 aa8.22□□□□□ -1.09
CLK1-201ENST00000321356 SLC22A4Q9H015 551 aa8.22□□□□□ -1.09
CLK1-201ENST00000321356 OR51I1Q9H343 314 aa8.22□□□□□ -1.09
CLK1-201ENST00000321356 DDX31Q9H8H2 851 aaKnown RBP8.22□□□□□ -1.09
CLK1-201ENST00000321356 ABCB9Q9NP78 766 aa8.22□□□□□ -1.09
CLK1-201ENST00000321356 TIGARQ9NQ88 270 aa8.22□□□□□ -1.09
CLK1-201ENST00000321356 FBXW2Q9UKT8 454 aa8.22□□□□□ -1.09
CLK1-201ENST00000321356 CKAP5Q14008 2032 aa8.22□□□□□ -1.09
CLK1-201ENST00000321356 HEATR5BQ9P2D3 2071 aa8.22□□□□□ -1.09
CLK1-201ENST00000321356 A0A1W2PPV9 198 aa8.21□□□□□ -1.09
CLK1-201ENST00000321356 KIAA0355O15063 1070 aa8.21□□□□□ -1.09
CLK1-201ENST00000321356 POLR1CO15160 346 aaPredicted RBP8.21□□□□□ -1.09
CLK1-201ENST00000321356 SCO2O43819 266 aa8.21□□□□□ -1.09
CLK1-201ENST00000321356 SH3BP5O60239 455 aa8.21□□□□□ -1.09
CLK1-201ENST00000321356 EPHX1P07099 455 aa8.21□□□□□ -1.09
CLK1-201ENST00000321356 RHOP08100 348 aa8.21□□□□□ -1.09
CLK1-201ENST00000321356 CLEC2LP0C7M8 214 aa8.21□□□□□ -1.09
CLK1-201ENST00000321356 ACP2P11117 423 aa8.21□□□□□ -1.09
CLK1-201ENST00000321356 HSD17B2P37059 387 aa8.21□□□□□ -1.09
CLK1-201ENST00000321356 CCR8P51685 355 aa8.21□□□□□ -1.09
CLK1-201ENST00000321356 TRA2BP62995 288 aaKnown RBP8.21□□□□□ -1.09
CLK1-201ENST00000321356 LSM11P83369 360 aaKnown RBP eCLIP8.21□□□□□ -1.095e-9■■□□□ 11.5
CLK1-201ENST00000321356 MXD1Q05195 221 aa8.21□□□□□ -1.09
CLK1-201ENST00000321356 RAB40BQ12829 278 aa8.21□□□□□ -1.09
CLK1-201ENST00000321356 SLAMF1Q13291 335 aa8.21□□□□□ -1.09
CLK1-201ENST00000321356 DHCR24Q15392 516 aa8.21□□□□□ -1.09
CLK1-201ENST00000321356 ZFP69Q49AA0 526 aa8.21□□□□□ -1.09
CLK1-201ENST00000321356 DDI2Q5TDH0 399 aa8.21□□□□□ -1.09
CLK1-201ENST00000321356 PPP2R2DQ66LE6 453 aa8.21□□□□□ -1.09
CLK1-201ENST00000321356 C22orf42Q6IC83 251 aa8.21□□□□□ -1.09
CLK1-201ENST00000321356 FAM131AQ6UXB0 335 aa8.21□□□□□ -1.09
CLK1-201ENST00000321356 QSOX2Q6ZRP7 698 aa8.21□□□□□ -1.09
CLK1-201ENST00000321356 IQCHQ86VS3 1027 aa8.21□□□□□ -1.09
CLK1-201ENST00000321356 KIF18BQ86Y91 864 aa8.21□□□□□ -1.09
CLK1-201ENST00000321356 TP53I13Q8NBR0 393 aaPredicted RBP8.21□□□□□ -1.09
CLK1-201ENST00000321356 ZNF485Q8NCK3 441 aa8.21□□□□□ -1.09
CLK1-201ENST00000321356 PSD4Q8NDX1 1056 aa8.21□□□□□ -1.09
CLK1-201ENST00000321356 OR5D16Q8NGK9 328 aa8.21□□□□□ -1.09
CLK1-201ENST00000321356 OR5K2Q8NHB8 316 aa8.21□□□□□ -1.09
CLK1-201ENST00000321356 TMEM163Q8TC26 289 aa8.21□□□□□ -1.09
CLK1-201ENST00000321356 TFGQ92734 400 aaPredicted RBP8.21□□□□□ -1.09
CLK1-201ENST00000321356 RGMAQ96B86 450 aa8.21□□□□□ -1.09
CLK1-201ENST00000321356 RNF170Q96K19 258 aa8.21□□□□□ -1.09
CLK1-201ENST00000321356 SLC35G5Q96KT7 338 aa8.21□□□□□ -1.09
CLK1-201ENST00000321356 PRRC1Q96M27 445 aa8.21□□□□□ -1.09
CLK1-201ENST00000321356 ZSWIM3Q96MP5 696 aa8.21□□□□□ -1.09
CLK1-201ENST00000321356 KCTD7Q96MP8 289 aa8.21□□□□□ -1.09
CLK1-201ENST00000321356 DEFB118Q96PH6 123 aa8.21□□□□□ -1.09
CLK1-201ENST00000321356 NRTNQ99748 197 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 149.1 ms