RNA–Protein interactions for RNA: ENST00000293922.1

PTX4-201, Transcript of pentraxin 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTX4, Length 1,422 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX4-201ENST00000293922 DGKQP52824 942 aa17.04■□□□□ 0.32
PTX4-201ENST00000293922 PHC1P78364 1004 aa17.04■□□□□ 0.32
PTX4-201ENST00000293922 SRSF1Q07955 248 aaKnown RBP eCLIP17.04■□□□□ 0.32
PTX4-201ENST00000293922 ACTN3Q08043 901 aaPredicted RBP17.04■□□□□ 0.32
PTX4-201ENST00000293922 CYLC2Q14093 348 aaPredicted RBP17.04■□□□□ 0.32
PTX4-201ENST00000293922 TIGD2Q4W5G0 525 aa17.04■□□□□ 0.32
PTX4-201ENST00000293922 ZNF385BQ569K4 471 aa17.04■□□□□ 0.32
PTX4-201ENST00000293922 MSANTD1Q6ZTZ1 278 aa17.04■□□□□ 0.32
PTX4-201ENST00000293922 KBTBD2Q8IY47 623 aa17.04■□□□□ 0.32
PTX4-201ENST00000293922 ZNF595Q8IYB9 648 aa17.04■□□□□ 0.32
PTX4-201ENST00000293922 NATD1Q8N6N6 113 aa17.04■□□□□ 0.32
PTX4-201ENST00000293922 AMER2Q8N7J2 671 aa17.04■□□□□ 0.32
PTX4-201ENST00000293922 GALNT11Q8NCW6 608 aa17.04■□□□□ 0.32
PTX4-201ENST00000293922 TMEM52Q8NDY8 209 aa17.04■□□□□ 0.32
PTX4-201ENST00000293922 PSMF1Q92530 271 aa17.04■□□□□ 0.32
PTX4-201ENST00000293922 TANKQ92844 425 aa17.04■□□□□ 0.32
PTX4-201ENST00000293922 WDR77Q9BQA1 342 aaPredicted RBP17.04■□□□□ 0.32
PTX4-201ENST00000293922 SH3BP4Q9P0V3 963 aa17.04■□□□□ 0.32
PTX4-201ENST00000293922 PSME2Q9UL46 239 aa17.04■□□□□ 0.32
PTX4-201ENST00000293922 MRPS33Q9Y291 106 aaKnown RBP17.04■□□□□ 0.32
PTX4-201ENST00000293922 USP9YO00507 2555 aaPredicted RBP17.04■□□□□ 0.32
PTX4-201ENST00000293922 LOC100653049A0A140TA62 436 aa17.04■□□□□ 0.32
PTX4-201ENST00000293922 CCDC154A6NI56 674 aa17.04■□□□□ 0.32
PTX4-201ENST00000293922 CFLARO15519 480 aa17.04■□□□□ 0.32
PTX4-201ENST00000293922 SCN2BO60939 215 aa17.04■□□□□ 0.32
PTX4-201ENST00000293922 KRT34O76011 436 aa17.04■□□□□ 0.32
PTX4-201ENST00000293922 UBOX5O94941 541 aa17.04■□□□□ 0.32
PTX4-201ENST00000293922 FHP07954 510 aa17.04■□□□□ 0.32
PTX4-201ENST00000293922 CELA2AP08217 269 aa17.04■□□□□ 0.32
PTX4-201ENST00000293922 CYC1P08574 325 aa17.04■□□□□ 0.32
PTX4-201ENST00000293922 WNT3P56703 355 aa17.04■□□□□ 0.32
PTX4-201ENST00000293922 STX5Q13190 355 aa17.04■□□□□ 0.32
PTX4-201ENST00000293922 TLR1Q15399 786 aa17.04■□□□□ 0.32
PTX4-201ENST00000293922 PRSS53Q2L4Q9 553 aa17.04■□□□□ 0.32
PTX4-201ENST00000293922 MPEG1Q2M385 716 aa17.04■□□□□ 0.32
PTX4-201ENST00000293922 PGS1Q32NB8 556 aa17.04■□□□□ 0.32
PTX4-201ENST00000293922 MINDY4Q4G0A6 757 aa17.04■□□□□ 0.32
PTX4-201ENST00000293922 VPS26BQ4G0F5 336 aa17.04■□□□□ 0.32
PTX4-201ENST00000293922 COQ5Q5HYK3 327 aa17.04■□□□□ 0.32
PTX4-201ENST00000293922 CRB2Q5IJ48 1285 aa17.04■□□□□ 0.32
PTX4-201ENST00000293922 LANCL3Q6ZV70 420 aa17.04■□□□□ 0.32
PTX4-201ENST00000293922 POU5F2Q8N7G0 328 aa17.04■□□□□ 0.32
PTX4-201ENST00000293922 VPS33AQ96AX1 596 aa17.04■□□□□ 0.32
PTX4-201ENST00000293922 DUSP26Q9BV47 211 aa17.04■□□□□ 0.32
PTX4-201ENST00000293922 SLC35C2Q9NQQ7 365 aa17.04■□□□□ 0.32
PTX4-201ENST00000293922 LANCL2Q9NS86 450 aa17.04■□□□□ 0.32
PTX4-201ENST00000293922 TAGLN3Q9UI15 199 aa17.04■□□□□ 0.32
PTX4-201ENST00000293922 UTS2RQ9UKP6 389 aa17.04■□□□□ 0.32
PTX4-201ENST00000293922 VPS4AQ9UN37 437 aa17.04■□□□□ 0.32
PTX4-201ENST00000293922 ASPDHA6ND91 283 aa17.03■□□□□ 0.32
PTX4-201ENST00000293922 WASHC1A8K0Z3 465 aa17.03■□□□□ 0.32
PTX4-201ENST00000293922 BBIP1A8MTZ0 92 aa17.03■□□□□ 0.32
PTX4-201ENST00000293922 CBX6O95503 412 aa17.03■□□□□ 0.32
PTX4-201ENST00000293922 SERPINA7P05543 415 aa17.03■□□□□ 0.32
PTX4-201ENST00000293922 T-ENOLP0DO92 83 aa17.03■□□□□ 0.32
PTX4-201ENST00000293922 SOX11P35716 441 aa17.03■□□□□ 0.32
PTX4-201ENST00000293922 FRKP42685 505 aaPredicted RBP17.03■□□□□ 0.32
PTX4-201ENST00000293922 CEBPEQ15744 281 aa17.03■□□□□ 0.32
PTX4-201ENST00000293922 MFSD4BQ5TF39 518 aa17.03■□□□□ 0.32
PTX4-201ENST00000293922 OR4F3Q6IEY1 312 aa17.03■□□□□ 0.32
PTX4-201ENST00000293922 ISLR2Q6UXK2 745 aa17.03■□□□□ 0.32
PTX4-201ENST00000293922 LINC00696Q6ZRV3 163 aa17.03■□□□□ 0.32
PTX4-201ENST00000293922 BRIX1Q8TDN6 353 aaKnown RBP17.03■□□□□ 0.32
PTX4-201ENST00000293922 METTL21AQ8WXB1 218 aa17.03■□□□□ 0.32
PTX4-201ENST00000293922 SNRNP40Q96DI7 357 aaKnown RBP17.03■□□□□ 0.32
PTX4-201ENST00000293922 NSL1Q96IY1 281 aa17.03■□□□□ 0.32
PTX4-201ENST00000293922 IMMP1LQ96LU5 166 aa17.03■□□□□ 0.32
PTX4-201ENST00000293922 OR52E6Q96RD3 313 aa17.03■□□□□ 0.32
PTX4-201ENST00000293922 TUBB6Q9BUF5 446 aa17.03■□□□□ 0.32
PTX4-201ENST00000293922 RBCK1Q9BYM8 510 aa17.03■□□□□ 0.32
PTX4-201ENST00000293922 FAM120CQ9NX05 1096 aaKnown RBP17.03■□□□□ 0.32
PTX4-201ENST00000293922 PCDHGA10Q9Y5H3 936 aa17.03■□□□□ 0.32
PTX4-201ENST00000293922 FBP2O00757 339 aa17.02■□□□□ 0.31
PTX4-201ENST00000293922 CLDN4O14493 209 aa17.02■□□□□ 0.31
PTX4-201ENST00000293922 CTNSO60931 367 aa17.02■□□□□ 0.31
PTX4-201ENST00000293922 GNLYP22749 145 aa17.02■□□□□ 0.31
PTX4-201ENST00000293922 PPP2R1BP30154 601 aa17.02■□□□□ 0.31
PTX4-201ENST00000293922 HSD17B7P56937 341 aa17.02■□□□□ 0.31
PTX4-201ENST00000293922 MFAP5Q13361 173 aa17.02■□□□□ 0.31
PTX4-201ENST00000293922 ANXA8L1Q5VT79 327 aa17.02■□□□□ 0.31
PTX4-201ENST00000293922 SAMD14Q8IZD0 417 aaPredicted RBP17.02■□□□□ 0.31
PTX4-201ENST00000293922 CISD2Q8N5K1 135 aaKnown RBP17.02■□□□□ 0.31
PTX4-201ENST00000293922 OR4K14Q8NGD5 310 aa17.02■□□□□ 0.31
PTX4-201ENST00000293922 EXOSC8Q96B26 276 aaKnown RBP17.02■□□□□ 0.31
PTX4-201ENST00000293922 KLHL29Q96CT2 875 aa17.02■□□□□ 0.31
PTX4-201ENST00000293922 CNRIP1Q96F85 164 aaPredicted RBP17.02■□□□□ 0.31
PTX4-201ENST00000293922 ZNF681Q96N22 645 aa17.02■□□□□ 0.31
PTX4-201ENST00000293922 LMF1Q96S06 567 aa17.02■□□□□ 0.31
PTX4-201ENST00000293922 EPS8L2Q9H6S3 715 aa17.02■□□□□ 0.31
PTX4-201ENST00000293922 LEF1Q9UJU2 399 aaPredicted RBP17.02■□□□□ 0.31
PTX4-201ENST00000293922 NDUFAF1Q9Y375 327 aa17.02■□□□□ 0.31
PTX4-201ENST00000293922 MMACHCQ9Y4U1 282 aa17.02■□□□□ 0.31
PTX4-201ENST00000293922 IGHV3-20A0A0C4DH32 117 aa17.01■□□□□ 0.31
PTX4-201ENST00000293922 PRSS51A0A1B0GVH4 220 aa17.01■□□□□ 0.31
PTX4-201ENST00000293922 RNASET2O00584 256 aaKnown RBP17.01■□□□□ 0.31
PTX4-201ENST00000293922 ANGPT2O15123 496 aa17.01■□□□□ 0.31
PTX4-201ENST00000293922 PDPK1O15530 556 aa17.01■□□□□ 0.31
PTX4-201ENST00000293922 FGF17O60258 216 aa17.01■□□□□ 0.31
PTX4-201ENST00000293922 B4GALT2O60909 372 aa17.01■□□□□ 0.31
PTX4-201ENST00000293922 CDC123O75794 336 aaPredicted RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms