RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Mon1bQ8BMQ8 553 aa14.87□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 PgghgQ8BP56 690 aa14.87□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Znf436Q8BPP0 452 aa14.87□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Uck2Q99PM9 261 aa14.87□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Pinx1Q9CZX5 332 aaKnown RBP14.87□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Exosc7Q9D0M0 291 aaKnown RBP14.87□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Mmp19Q9JHI0 527 aa14.87□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Il18P70380 192 aa14.87□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Eipr1Q8K0G5 386 aa14.87□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 TmieQ8K467 153 aa14.87□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Rwdd2bQ99M03 290 aa14.87□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 NtpcrQ9CQA9 190 aaKnown RBP14.87□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Q9DAY5 185 aa14.87□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Fmo6J3QMN6 532 aa14.86□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Tigd2Q0VBL1 525 aa14.86□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Laptm4aQ60961 233 aa14.86□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Fzd6Q61089 709 aa14.86□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Timm29Q8BGX2 266 aa14.86□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Ces2eQ8BK48 559 aa14.86□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Olfr380Q8VGT3 311 aa14.86□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Mrgprb4Q91ZC0 321 aa14.86□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Mto1Q923Z3 669 aa14.86□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Nectin3Q9JLB9 549 aa14.86□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 MthfrQ9WU20 654 aa14.86□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 ItgamP05555 1153 aa14.86□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 LifP09056 203 aa14.86□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 ArsaP50428 506 aa14.86□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Lefty2P57785 368 aa14.86□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Tmem184cQ3TPR7 525 aa14.86□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Znf32Q80V23 272 aa14.86□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Pomt2Q8BGQ4 820 aa14.86□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Tceal3Q8R0A5 200 aa14.86□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 AmnQ99JB7 458 aaKnown RBP14.86□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Lactb2Q99KR3 288 aa14.86□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Nkx2-4Q9EQM3 354 aa14.86□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Bmp10Q9R229 421 aa14.86□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Numa1E9Q7G0 2094 aaKnown RBP14.86□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Slc43a3A2AVZ9 502 aa14.86□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Sult6b2B7ZWN4 290 aa14.86□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Syn1O88935 706 aa14.86□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Slc16a3P57787 470 aa14.86□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Tbx5P70326 518 aa14.86□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 GiprQ0P543 460 aa14.86□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Casd1Q7TN73 797 aa14.86□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Vmn1r30Q8R2D2 302 aa14.86□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Mtfr2Q8VED8 361 aa14.86□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Rab28Q99KL7 221 aa14.86□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Mgme1Q9CXC3 338 aa14.86□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Tmigd1Q9D7L8 261 aa14.86□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Gtf2h4O70422 463 aaKnown RBP14.86□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Cacng1O70578 223 aa14.86□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Polr2cP97760 275 aa14.86□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Gdf3Q07104 366 aa14.86□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Perm1Q149B8 807 aa14.86□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Trappc13Q3TIR1 417 aa14.86□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Macrod2Q3UYG8 475 aa14.86□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Fzd3Q61086 666 aa14.86□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Snta1Q61234 503 aa14.86□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 RhbgQ8BUX5 455 aa14.86□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Arfrp1Q8BXL7 201 aa14.86□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Olfr985Q8VGB4 311 aa14.86□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Camk2gQ923T9 529 aa14.86□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Trmt5Q9D0C4 501 aa14.86□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Kiaa0141Q9DCV6 510 aa14.86□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Olfr671A0A1B0GSN5 317 aa14.85□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Tex13aA2AFS9 377 aa14.85□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 H2-M11F6U8V3 335 aa14.85□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Vmn2r8L7N472 848 aa14.85□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Rdh5O55240 318 aa14.85□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 DgkaO88673 730 aa14.85□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Cyp21P03940 487 aa14.85□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Flt3lgP49772 232 aa14.85□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 TstP52196 297 aaKnown RBP14.85□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Eif5aP63242 154 aaKnown RBP14.85□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Ccdc116Q80X53 541 aa14.85□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Larp4Q8BWW4 719 aaKnown RBP14.85□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Ly6g5cQ8K1T5 149 aa14.85□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Mrgpra1Q91WW5 304 aa14.85□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Taf8Q9EQH4 308 aa14.85□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Esp22A8R0V4 111 aa14.85□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Zfp384E9Q1A5 584 aaKnown RBP14.85□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 LipcP27656 510 aa14.85□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Etv4P28322 485 aa14.85□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Alg11Q3TZM9 492 aa14.85□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Ifngr2Q63953 332 aa14.85□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Ip6k1Q6PD10 433 aa14.85□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Mblac2Q8BL86 279 aa14.85□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Acot4Q8BWN8 421 aa14.85□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Gm5938A2AEN9 163 aa14.85□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Olfr74A2BHP6 318 aa14.85□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Hoxb6P09023 224 aa14.85□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Camk2bP28652 542 aa14.85□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 AcadvlP50544 656 aa14.85□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Ikzf2P81183 526 aa14.85□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Fbxw18Q3TSA9 469 aa14.85□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Eif1aQ60872 144 aaKnown RBP14.85□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Rgs7bpQ8BQP9 257 aa14.85□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Tgif2Q8C0Y1 237 aa14.85□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Nt5dc1Q8C5P5 467 aa14.85□□□□□ -0.03
Ccdc88b-201ENSMUST00000113440 Colec10Q8CF98 277 aa14.85□□□□□ -0.03
Retrieved 100 of 22,080 RNA–protein pairs in 250.4 ms