RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Rab7bQ8VEA8 199 aa13.97□□□□□ -0.17
Nup88-202ENSMUST00000108530 Olfr854Q8VFF1 315 aa13.97□□□□□ -0.17
Nup88-202ENSMUST00000108530 Olfr541Q8VGM0 312 aa13.97□□□□□ -0.17
Nup88-202ENSMUST00000108530 Rmnd5bQ91YQ7 393 aa13.97□□□□□ -0.17
Nup88-202ENSMUST00000108530 Ska1Q9CPV1 254 aa13.97□□□□□ -0.17
Nup88-202ENSMUST00000108530 Mri1Q9CQT1 369 aa13.97□□□□□ -0.17
Nup88-202ENSMUST00000108530 Chchd2Q9D1L0 153 aa13.97□□□□□ -0.17
Nup88-202ENSMUST00000108530 Zdhhc21Q9D270 265 aa13.97□□□□□ -0.17
Nup88-202ENSMUST00000108530 Mrpl46Q9EQI8 283 aa13.97□□□□□ -0.17
Nup88-202ENSMUST00000108530 Olfr237-ps1K9J725 310 aa13.97□□□□□ -0.17
Nup88-202ENSMUST00000108530 Gm8926L7MUE8 181 aa13.97□□□□□ -0.17
Nup88-202ENSMUST00000108530 Vmn2r31L7N1Z4 861 aa13.97□□□□□ -0.17
Nup88-202ENSMUST00000108530 P01629 112 aa13.97□□□□□ -0.17
Nup88-202ENSMUST00000108530 CfpP11680 464 aa13.97□□□□□ -0.17
Nup88-202ENSMUST00000108530 Arf3P61205 181 aa13.97□□□□□ -0.17
Nup88-202ENSMUST00000108530 Kcnab2P62482 367 aa13.97□□□□□ -0.17
Nup88-202ENSMUST00000108530 Bcl2a1bQ497M6 172 aa13.97□□□□□ -0.17
Nup88-202ENSMUST00000108530 Chsy3Q5DTK1 884 aa13.97□□□□□ -0.17
Nup88-202ENSMUST00000108530 Defa17Q64016 82 aa13.97□□□□□ -0.17
Nup88-202ENSMUST00000108530 Mfn1Q811U4 741 aa13.97□□□□□ -0.17
Nup88-202ENSMUST00000108530 4933430I17RikQ8BHW4 495 aa13.97□□□□□ -0.17
Nup88-202ENSMUST00000108530 Apbb3Q8R1C9 486 aa13.97□□□□□ -0.17
Nup88-202ENSMUST00000108530 Ptcd2Q8R3K3 381 aaKnown RBP13.97□□□□□ -0.17
Nup88-202ENSMUST00000108530 Olfr729Q8VET4 323 aa13.97□□□□□ -0.17
Nup88-202ENSMUST00000108530 Smap1Q91VZ6 440 aa13.97□□□□□ -0.17
Nup88-202ENSMUST00000108530 Twist2Q9D030 160 aa13.97□□□□□ -0.17
Nup88-202ENSMUST00000108530 Tmeff2Q9QYM9 374 aa13.97□□□□□ -0.17
Nup88-202ENSMUST00000108530 Lrp4Q8VI56 1905 aa13.97□□□□□ -0.17
Nup88-202ENSMUST00000108530 4932443I19RikA0A286YE38 169 aa13.96□□□□□ -0.17
Nup88-202ENSMUST00000108530 Gm14399A2ARW8 610 aa13.96□□□□□ -0.17
Nup88-202ENSMUST00000108530 Slfn9B1ARD6 910 aa13.96□□□□□ -0.17
Nup88-202ENSMUST00000108530 Fam84bD3YXJ5 310 aa13.96□□□□□ -0.17
Nup88-202ENSMUST00000108530 5430403G16RikD3Z5L4 667 aa13.96□□□□□ -0.17
Nup88-202ENSMUST00000108530 Vmn2r18E9Q280 788 aa13.96□□□□□ -0.17
Nup88-202ENSMUST00000108530 Kcnmb3E9Q7U0 239 aa13.96□□□□□ -0.17
Nup88-202ENSMUST00000108530 Olfr631F8VPJ9 319 aa13.96□□□□□ -0.17
Nup88-202ENSMUST00000108530 Olfr209L7N1X3 305 aa13.96□□□□□ -0.17
Nup88-202ENSMUST00000108530 Vmn2r52L7N2B2 852 aa13.96□□□□□ -0.17
Nup88-202ENSMUST00000108530 UgdhO70475 493 aa13.96□□□□□ -0.17
Nup88-202ENSMUST00000108530 Psmb9P28076 219 aa13.96□□□□□ -0.17
Nup88-202ENSMUST00000108530 OcmP51879 109 aa13.96□□□□□ -0.17
Nup88-202ENSMUST00000108530 PtnP63089 168 aa13.96□□□□□ -0.17
Nup88-202ENSMUST00000108530 Pou1f1Q00286 291 aa13.96□□□□□ -0.17
Nup88-202ENSMUST00000108530 Zfhx2Q2MHN3 2562 aa13.96□□□□□ -0.17
Nup88-202ENSMUST00000108530 Abcb7Q61102 752 aaKnown RBP13.96□□□□□ -0.17
Nup88-202ENSMUST00000108530 Tmc6Q7TN60 810 aa13.96□□□□□ -0.17
Nup88-202ENSMUST00000108530 Olfr699Q7TRN3 316 aa13.96□□□□□ -0.17
Nup88-202ENSMUST00000108530 Rap2aQ80ZJ1 183 aa13.96□□□□□ -0.17
Nup88-202ENSMUST00000108530 Cpeb2Q812E0 521 aaKnown RBP13.96□□□□□ -0.17
Nup88-202ENSMUST00000108530 Krt75Q8BGZ7 551 aa13.96□□□□□ -0.17
Nup88-202ENSMUST00000108530 Fam69cQ8BQT2 410 aa13.96□□□□□ -0.17
Nup88-202ENSMUST00000108530 Q8CF31 99 aa13.96□□□□□ -0.17
Nup88-202ENSMUST00000108530 Tmem106aQ8VC04 261 aa13.96□□□□□ -0.17
Nup88-202ENSMUST00000108530 Dcbld2Q91ZV3 769 aa13.96□□□□□ -0.17
Nup88-202ENSMUST00000108530 Slc35a5Q921R7 437 aa13.96□□□□□ -0.17
Nup88-202ENSMUST00000108530 Nkd1Q99MH6 471 aa13.96□□□□□ -0.17
Nup88-202ENSMUST00000108530 CenpnQ9CZW2 337 aa13.96□□□□□ -0.17
Nup88-202ENSMUST00000108530 Erp27Q9D8U3 272 aa13.96□□□□□ -0.17
Nup88-202ENSMUST00000108530 Hipk3Q9ERH7 1192 aa13.96□□□□□ -0.17
Nup88-202ENSMUST00000108530 Slc13a2Q9ES88 586 aa13.96□□□□□ -0.17
Nup88-202ENSMUST00000108530 AnkhQ9JHZ2 492 aa13.96□□□□□ -0.17
Nup88-202ENSMUST00000108530 Tas2r103Q9JKA3 312 aa13.96□□□□□ -0.17
Nup88-202ENSMUST00000108530 Csnk1eQ9JMK2 416 aaKnown RBP13.96□□□□□ -0.17
Nup88-202ENSMUST00000108530 Gm6710A2ART0 554 aa13.96□□□□□ -0.18
Nup88-202ENSMUST00000108530 Gm8267E9Q207 261 aa13.96□□□□□ -0.18
Nup88-202ENSMUST00000108530 Vmn2r105E9Q3A5 860 aa13.96□□□□□ -0.18
Nup88-202ENSMUST00000108530 Vmn2r35E9Q7U8 861 aa13.96□□□□□ -0.18
Nup88-202ENSMUST00000108530 Vmn2r92L7N2A4 860 aa13.96□□□□□ -0.18
Nup88-202ENSMUST00000108530 Lrrc23O35125 340 aa13.96□□□□□ -0.18
Nup88-202ENSMUST00000108530 Cdh4P39038 913 aa13.96□□□□□ -0.18
Nup88-202ENSMUST00000108530 Alox5P48999 674 aa13.96□□□□□ -0.18
Nup88-202ENSMUST00000108530 AcadvlP50544 656 aa13.96□□□□□ -0.18
Nup88-202ENSMUST00000108530 Tra2bP62996 288 aaKnown RBP13.96□□□□□ -0.18
Nup88-202ENSMUST00000108530 MedagQ14BA6 303 aa13.96□□□□□ -0.18
Nup88-202ENSMUST00000108530 Zc3hav1Q3UPF5 946 aaKnown RBP13.96□□□□□ -0.18
Nup88-202ENSMUST00000108530 Eef2kmtQ3UZW7 335 aa13.96□□□□□ -0.18
Nup88-202ENSMUST00000108530 Trp53i11Q4QQM4 189 aa13.96□□□□□ -0.18
Nup88-202ENSMUST00000108530 Rab26Q504M8 260 aa13.96□□□□□ -0.18
Nup88-202ENSMUST00000108530 Lasp1Q61792 263 aaKnown RBP13.96□□□□□ -0.18
Nup88-202ENSMUST00000108530 Cd3eapQ76KJ5 399 aa13.96□□□□□ -0.18
Nup88-202ENSMUST00000108530 Fbxo22Q78JE5 402 aa13.96□□□□□ -0.18
Nup88-202ENSMUST00000108530 Oscp1Q8BHW2 379 aa13.96□□□□□ -0.18
Nup88-202ENSMUST00000108530 BC024139Q8BVJ3 772 aa13.96□□□□□ -0.18
Nup88-202ENSMUST00000108530 Rbm4Q8C7Q4 361 aaKnown RBP13.96□□□□□ -0.18
Nup88-202ENSMUST00000108530 Ly6g6eQ8K1T6 166 aa13.96□□□□□ -0.18
Nup88-202ENSMUST00000108530 Clrn1Q8K445 232 aa13.96□□□□□ -0.18
Nup88-202ENSMUST00000108530 Mtg1Q8R2R6 326 aa13.96□□□□□ -0.18
Nup88-202ENSMUST00000108530 Rbm4bQ8VE92 357 aaKnown RBP13.96□□□□□ -0.18
Nup88-202ENSMUST00000108530 Prelid3bQ9CYY7 195 aa13.96□□□□□ -0.18
Nup88-202ENSMUST00000108530 RgccQ9DBX1 137 aa13.96□□□□□ -0.18
Nup88-202ENSMUST00000108530 Mapk11Q9WUI1 364 aa13.96□□□□□ -0.18
Nup88-202ENSMUST00000108530 Lbx2Q9WUN8 195 aa13.96□□□□□ -0.18
Nup88-202ENSMUST00000108530 Myo15aQ9QZZ4 3511 aa13.96□□□□□ -0.18
Nup88-202ENSMUST00000108530 Btbd35f15A0A087WR44 498 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Btbd35f12A0A0A0MQP3 498 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 IsxA1A546 240 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Gm13040A2A8C4 496 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Btbd35f9A2BFZ7 498 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Btbd35f7A2BHG6 498 aa13.95□□□□□ -0.18
Nup88-202ENSMUST00000108530 Btbd35f19A2CG71 498 aa13.95□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 93.9 ms