RNA–Protein interactions for RNA: ENST00000625891.2

NRXN1-223, Transcript of neurexin 1, human

TSL 4 BASIC

Gene NRXN1, Length 1,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-223	ENST00000625891	SLC47A1	Q96FL8	570 aa		5.1	□□□□□ -1.59
NRXN1-223	ENST00000625891	EPSTI1	Q96J88	318 aa		5.1	□□□□□ -1.59
NRXN1-223	ENST00000625891	INPP4A	Q96PE3	977 aa	Predicted RBP	5.1	□□□□□ -1.59
NRXN1-223	ENST00000625891	IWS1	Q96ST2	819 aa		5.1	□□□□□ -1.59
NRXN1-223	ENST00000625891	DDX50	Q9BQ39	737 aa	Known RBP	5.1	□□□□□ -1.59
NRXN1-223	ENST00000625891	LY9	Q9HBG7	655 aa		5.1	□□□□□ -1.59
NRXN1-223	ENST00000625891	ZNF334	Q9HCZ1	680 aa	Predicted RBP	5.1	□□□□□ -1.59
NRXN1-223	ENST00000625891	MRPL17	Q9NRX2	175 aa	Known RBP	5.1	□□□□□ -1.59
NRXN1-223	ENST00000625891	ZCCHC3	Q9NUD5	404 aa	Known RBP	5.1	□□□□□ -1.59
NRXN1-223	ENST00000625891	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	5.1	□□□□□ -1.59
NRXN1-223	ENST00000625891	SH3BGRL2	Q9UJC5	107 aa		5.1	□□□□□ -1.59
NRXN1-223	ENST00000625891	BARX2	Q9UMQ3	279 aa	Predicted RBP	5.1	□□□□□ -1.59
NRXN1-223	ENST00000625891	DOCK6	Q96HP0	2047 aa		5.09	□□□□□ -1.59
NRXN1-223	ENST00000625891	C2CD4D	B7Z1M9	353 aa		5.09	□□□□□ -1.59
NRXN1-223	ENST00000625891	GRAP2	O75791	330 aa		5.09	□□□□□ -1.59
NRXN1-223	ENST00000625891	GUCA1C	O95843	209 aa		5.09	□□□□□ -1.59
NRXN1-223	ENST00000625891	CCNE2	O96020	404 aa		5.09	□□□□□ -1.59
NRXN1-223	ENST00000625891	MT-ATP6	P00846	226 aa		5.09	□□□□□ -1.59
NRXN1-223	ENST00000625891	ETS1	P14921	441 aa		5.09	□□□□□ -1.59
NRXN1-223	ENST00000625891	EFNA1	P20827	205 aa	Predicted RBP	5.09	□□□□□ -1.59
NRXN1-223	ENST00000625891	CHML	P26374	656 aa		5.09	□□□□□ -1.59
NRXN1-223	ENST00000625891	EPHA2	P29317	976 aa		5.09	□□□□□ -1.59
NRXN1-223	ENST00000625891	SMS	P52788	366 aa		5.09	□□□□□ -1.59
NRXN1-223	ENST00000625891	POLR2F	P61218	127 aa	Known RBP	5.09	□□□□□ -1.59
NRXN1-223	ENST00000625891	RPP38	P78345	283 aa	Known RBP	5.09	□□□□□ -1.59
NRXN1-223	ENST00000625891	GALK2	Q01415	458 aa		5.09	□□□□□ -1.59
NRXN1-223	ENST00000625891	LGALS3BP	Q08380	585 aa		5.09	□□□□□ -1.59
NRXN1-223	ENST00000625891	TAF10	Q12962	218 aa		5.09	□□□□□ -1.59
NRXN1-223	ENST00000625891	ITGB3BP	Q13352	177 aa	Predicted RBP	5.09	□□□□□ -1.59
NRXN1-223	ENST00000625891	OPCML	Q14982	345 aa		5.09	□□□□□ -1.59
NRXN1-223	ENST00000625891	ARMCX4	Q5H9R4	360 aa		5.09	□□□□□ -1.59
NRXN1-223	ENST00000625891	WDR38	Q5JTN6	314 aa		5.09	□□□□□ -1.59
NRXN1-223	ENST00000625891	ASPG	Q86U10	573 aa		5.09	□□□□□ -1.59
NRXN1-223	ENST00000625891	DCUN1D3	Q8IWE4	304 aa		5.09	□□□□□ -1.59
NRXN1-223	ENST00000625891	LAX1	Q8IWV1	398 aa		5.09	□□□□□ -1.59
NRXN1-223	ENST00000625891	ELMOD2	Q8IZ81	293 aa		5.09	□□□□□ -1.59
NRXN1-223	ENST00000625891	TMEM99	Q8N816	258 aa		5.09	□□□□□ -1.59
NRXN1-223	ENST00000625891	CCNY	Q8ND76	341 aa		5.09	□□□□□ -1.59
NRXN1-223	ENST00000625891	GRHL3	Q8TE85	626 aa		5.09	□□□□□ -1.59
NRXN1-223	ENST00000625891	GGH	Q92820	318 aa		5.09	□□□□□ -1.59
NRXN1-223	ENST00000625891	SLCO4A1	Q96BD0	722 aa		5.09	□□□□□ -1.59
NRXN1-223	ENST00000625891	ULK4	Q96C45	1275 aa		5.09	□□□□□ -1.59
NRXN1-223	ENST00000625891	TSGA13	Q96PP4	275 aa		5.09	□□□□□ -1.59
NRXN1-223	ENST00000625891	UHRF2	Q96PU4	802 aa		5.09	□□□□□ -1.59
NRXN1-223	ENST00000625891	FAM49A	Q9H0Q0	323 aa	Predicted RBP	5.09	□□□□□ -1.59
NRXN1-223	ENST00000625891	RPF1	Q9H9Y2	349 aa	Known RBP	5.09	□□□□□ -1.59
NRXN1-223	ENST00000625891	SDR39U1	Q9NRG7	319 aa	Predicted RBP	5.09	□□□□□ -1.59
NRXN1-223	ENST00000625891	FAM207A	Q9NSI2	230 aa	Predicted RBP	5.09	□□□□□ -1.59
NRXN1-223	ENST00000625891	PTTG2	Q9NZH5	202 aa		5.09	□□□□□ -1.59
NRXN1-223	ENST00000625891	MAN1B1	Q9UKM7	699 aa		5.09	□□□□□ -1.59
NRXN1-223	ENST00000625891	PRDM4	Q9UKN5	801 aa		5.09	□□□□□ -1.59
NRXN1-223	ENST00000625891	KCNK6	Q9Y257	313 aa		5.09	□□□□□ -1.59
NRXN1-223	ENST00000625891	MRPL11	Q9Y3B7	192 aa	Known RBP	5.09	□□□□□ -1.59
NRXN1-223	ENST00000625891	C2orf16	Q68DN1	1984 aa		5.09	□□□□□ -1.6
NRXN1-223	ENST00000625891	RAD50	Q92878	1312 aa		5.08	□□□□□ -1.6
NRXN1-223	ENST00000625891	LOC101059948	A0A1B0GTJ6	334 aa		5.08	□□□□□ -1.6
NRXN1-223	ENST00000625891	TMEM150B	A6NC51	233 aa		5.08	□□□□□ -1.6
NRXN1-223	ENST00000625891	CFAP73	A6NFT4	308 aa		5.08	□□□□□ -1.6
NRXN1-223	ENST00000625891		M0R296	226 aa		5.08	□□□□□ -1.6
NRXN1-223	ENST00000625891	SLC22A2	O15244	555 aa		5.08	□□□□□ -1.6
NRXN1-223	ENST00000625891	MAGEB2	O15479	319 aa		5.08	□□□□□ -1.6
NRXN1-223	ENST00000625891	CSDE1	O75534	798 aa	Known RBP	5.08	□□□□□ -1.6
NRXN1-223	ENST00000625891	RAF1	P04049	648 aa		5.08	□□□□□ -1.6
NRXN1-223	ENST00000625891	POLR2M	P0CAP2	368 aa		5.08	□□□□□ -1.6
NRXN1-223	ENST00000625891	CA4	P22748	312 aa		5.08	□□□□□ -1.6
NRXN1-223	ENST00000625891	ACP1	P24666	158 aa		5.08	□□□□□ -1.6
NRXN1-223	ENST00000625891	CCND2	P30279	289 aa		5.08	□□□□□ -1.6
NRXN1-223	ENST00000625891	LINC01547	P58512	204 aa	Predicted RBP	5.08	□□□□□ -1.6
NRXN1-223	ENST00000625891	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	5.08	□□□□□ -1.6
NRXN1-223	ENST00000625891	TRMT1L	Q7Z2T5	733 aa	Known RBP	5.08	□□□□□ -1.6
NRXN1-223	ENST00000625891	RTN4RL2	Q86UN3	420 aa		5.08	□□□□□ -1.6
NRXN1-223	ENST00000625891	THEM5	Q8N1Q8	247 aa		5.08	□□□□□ -1.6
NRXN1-223	ENST00000625891	SIDT2	Q8NBJ9	832 aa	Known RBP	5.08	□□□□□ -1.6
NRXN1-223	ENST00000625891	LEMD2	Q8NC56	503 aa		5.08	□□□□□ -1.6
NRXN1-223	ENST00000625891	FCAMR	Q8WWV6	532 aa		5.08	□□□□□ -1.6
NRXN1-223	ENST00000625891	DTD2	Q96FN9	168 aa		5.08	□□□□□ -1.6
NRXN1-223	ENST00000625891	NDN	Q99608	321 aa		5.08	□□□□□ -1.6
NRXN1-223	ENST00000625891	PRMT1	Q99873	361 aa	Known RBP	5.08	□□□□□ -1.6
NRXN1-223	ENST00000625891	ACPT	Q9BZG2	426 aa		5.08	□□□□□ -1.6
NRXN1-223	ENST00000625891	LAT2	Q9GZY6	243 aa		5.08	□□□□□ -1.6
NRXN1-223	ENST00000625891	ATG10	Q9H0Y0	220 aa		5.08	□□□□□ -1.6
NRXN1-223	ENST00000625891	ZDHHC6	Q9H6R6	413 aa		5.08	□□□□□ -1.6
NRXN1-223	ENST00000625891	UPF2	Q9HAU5	1272 aa	Known RBP	5.08	□□□□□ -1.6
NRXN1-223	ENST00000625891	GPN1	Q9HCN4	374 aa	Predicted RBP	5.08	□□□□□ -1.6
NRXN1-223	ENST00000625891	A4GALT	Q9NPC4	353 aa		5.08	□□□□□ -1.6
NRXN1-223	ENST00000625891	EXOC1	Q9NV70	894 aa		5.08	□□□□□ -1.6
NRXN1-223	ENST00000625891	IL36A	Q9UHA7	158 aa		5.08	□□□□□ -1.6
NRXN1-223	ENST00000625891	AURKC	Q9UQB9	309 aa		5.08	□□□□□ -1.6
NRXN1-223	ENST00000625891	UBIAD1	Q9Y5Z9	338 aa		5.08	□□□□□ -1.6
NRXN1-223	ENST00000625891	CLCA3P	Q9Y6N3	262 aa		5.08	□□□□□ -1.6
NRXN1-223	ENST00000625891	ADGRA3	Q8IWK6	1321 aa		5.07	□□□□□ -1.6
NRXN1-223	ENST00000625891	RGSL1	A5PLK6	1076 aa		5.07	□□□□□ -1.6
NRXN1-223	ENST00000625891	ANKDD1B	A6NHY2	528 aa		5.07	□□□□□ -1.6
NRXN1-223	ENST00000625891	HIDE1	A8MVS5	230 aa		5.07	□□□□□ -1.6
NRXN1-223	ENST00000625891	TEX28	O15482	410 aa		5.07	□□□□□ -1.6
NRXN1-223	ENST00000625891	DCX	O43602	365 aa		5.07	□□□□□ -1.6
NRXN1-223	ENST00000625891	ATP6V1G1	O75348	118 aa		5.07	□□□□□ -1.6
NRXN1-223	ENST00000625891	CLN5	O75503	358 aa		5.07	□□□□□ -1.6
NRXN1-223	ENST00000625891	NR3C1	P04150	777 aa		5.07	□□□□□ -1.6
NRXN1-223	ENST00000625891	HEXB	P07686	556 aa		5.07	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms