RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 F2RL3Q96RI0 385 aa16.2■□□□□ 0.18
SHKBP1-205ENST00000594973 AIF1LQ9BQI0 150 aa16.2■□□□□ 0.18
SHKBP1-205ENST00000594973 VPS4AQ9UN37 437 aa16.2■□□□□ 0.18
SHKBP1-205ENST00000594973 SAMD4AQ9UPU9 718 aaKnown RBP16.2■□□□□ 0.18
SHKBP1-205ENST00000594973 MAPRE3Q9UPY8 281 aa16.2■□□□□ 0.18
SHKBP1-205ENST00000594973 GOLGA4Q13439 2230 aaKnown RBP16.2■□□□□ 0.18
SHKBP1-205ENST00000594973 A0A1W2PPV9 198 aa16.19■□□□□ 0.18
SHKBP1-205ENST00000594973 RNASET2O00584 256 aaKnown RBP16.19■□□□□ 0.18
SHKBP1-205ENST00000594973 NOS1APO75052 506 aaPredicted RBP16.19■□□□□ 0.18
SHKBP1-205ENST00000594973 TBX6O95947 436 aaPredicted RBP16.19■□□□□ 0.18
SHKBP1-205ENST00000594973 IL1RNP18510 177 aa16.19■□□□□ 0.18
SHKBP1-205ENST00000594973 PRKACGP22612 351 aa16.19■□□□□ 0.18
SHKBP1-205ENST00000594973 GADD45AP24522 165 aa16.19■□□□□ 0.18
SHKBP1-205ENST00000594973 AQP1P29972 269 aa16.19■□□□□ 0.18
SHKBP1-205ENST00000594973 LTBRP36941 435 aa16.19■□□□□ 0.18
SHKBP1-205ENST00000594973 CCR8P51685 355 aa16.19■□□□□ 0.18
SHKBP1-205ENST00000594973 CLDN2P57739 230 aa16.19■□□□□ 0.18
SHKBP1-205ENST00000594973 ZNF852Q6ZMS4 543 aa16.19■□□□□ 0.18
SHKBP1-205ENST00000594973 SLC46A3Q7Z3Q1 461 aa16.19■□□□□ 0.18
SHKBP1-205ENST00000594973 VTCN1Q7Z7D3 282 aa16.19■□□□□ 0.18
SHKBP1-205ENST00000594973 SNAPC3Q92966 411 aa16.19■□□□□ 0.18
SHKBP1-205ENST00000594973 TBC1D20Q96BZ9 403 aa16.19■□□□□ 0.18
SHKBP1-205ENST00000594973 APOOQ9BUR5 198 aa16.19■□□□□ 0.18
SHKBP1-205ENST00000594973 BHLHE41Q9C0J9 482 aaPredicted RBP16.19■□□□□ 0.18
SHKBP1-205ENST00000594973 BTBD1Q9H0C5 482 aa16.19■□□□□ 0.18
SHKBP1-205ENST00000594973 PRDM8Q9NQV8 689 aa16.19■□□□□ 0.18
SHKBP1-205ENST00000594973 ATP6V1HQ9UI12 483 aa16.19■□□□□ 0.18
SHKBP1-205ENST00000594973 SLC17A4Q9Y2C5 497 aa16.19■□□□□ 0.18
SHKBP1-205ENST00000594973 CA5BQ9Y2D0 317 aa16.19■□□□□ 0.18
SHKBP1-205ENST00000594973 PIAS3Q9Y6X2 628 aa16.19■□□□□ 0.18
SHKBP1-205ENST00000594973 PLPP1O14494 284 aa16.19■□□□□ 0.18
SHKBP1-205ENST00000594973 SOX6P35712 828 aa16.19■□□□□ 0.18
SHKBP1-205ENST00000594973 HSD17B2P37059 387 aa16.19■□□□□ 0.18
SHKBP1-205ENST00000594973 CRATP43155 626 aa16.19■□□□□ 0.18
SHKBP1-205ENST00000594973 MAD2L1BPQ15013 274 aaPredicted RBP16.19■□□□□ 0.18
SHKBP1-205ENST00000594973 TMEM31Q5JXX7 168 aa16.19■□□□□ 0.18
SHKBP1-205ENST00000594973 CPZQ66K79 652 aa16.19■□□□□ 0.18
SHKBP1-205ENST00000594973 SHQ1Q6PI26 577 aaKnown RBP16.19■□□□□ 0.18
SHKBP1-205ENST00000594973 GPR155Q7Z3F1 870 aa16.19■□□□□ 0.18
SHKBP1-205ENST00000594973 SLC9B2Q86UD5 537 aa16.19■□□□□ 0.18
SHKBP1-205ENST00000594973 TSPYL5Q86VY4 417 aaPredicted RBP16.19■□□□□ 0.18
SHKBP1-205ENST00000594973 ZDHHC21Q8IVQ6 265 aa16.19■□□□□ 0.18
SHKBP1-205ENST00000594973 SIPA1Q96FS4 1042 aa16.19■□□□□ 0.18
SHKBP1-205ENST00000594973 SLC30A2Q9BRI3 323 aa16.19■□□□□ 0.18
SHKBP1-205ENST00000594973 TRAF4Q9BUZ4 470 aaPredicted RBP16.19■□□□□ 0.18
SHKBP1-205ENST00000594973 C1QTNF7Q9BXJ2 289 aa16.19■□□□□ 0.18
SHKBP1-205ENST00000594973 C12orf4Q9NQ89 552 aa16.19■□□□□ 0.18
SHKBP1-205ENST00000594973 SIRT5Q9NXA8 310 aa16.19■□□□□ 0.18
SHKBP1-205ENST00000594973 ACSL6Q9UKU0 697 aa16.19■□□□□ 0.18
SHKBP1-205ENST00000594973 POM121BA6NF01 834 aa16.18■□□□□ 0.18
SHKBP1-205ENST00000594973 CACNB4O00305 520 aaPredicted RBP16.18■□□□□ 0.18
SHKBP1-205ENST00000594973 PDPK1O15530 556 aa16.18■□□□□ 0.18
SHKBP1-205ENST00000594973 SLITRK5O94991 958 aa16.18■□□□□ 0.18
SHKBP1-205ENST00000594973 TEAD1P28347 426 aa16.18■□□□□ 0.18
SHKBP1-205ENST00000594973 KDELR2P33947 212 aa16.18■□□□□ 0.18
SHKBP1-205ENST00000594973 PTGS2P35354 604 aa16.18■□□□□ 0.18
SHKBP1-205ENST00000594973 MLLT3P42568 568 aaPredicted RBP16.18■□□□□ 0.18
SHKBP1-205ENST00000594973 RGNQ15493 299 aa16.18■□□□□ 0.18
SHKBP1-205ENST00000594973 TBCEQ15813 527 aaPredicted RBP16.18■□□□□ 0.18
SHKBP1-205ENST00000594973 SYT16Q17RD7 645 aa16.18■□□□□ 0.18
SHKBP1-205ENST00000594973 PRSS53Q2L4Q9 553 aa16.18■□□□□ 0.18
SHKBP1-205ENST00000594973 MPEG1Q2M385 716 aa16.18■□□□□ 0.18
SHKBP1-205ENST00000594973 FAM71E1Q6IPT2 247 aa16.18■□□□□ 0.18
SHKBP1-205ENST00000594973 TCTE3Q8IZS6 198 aa16.18■□□□□ 0.18
SHKBP1-205ENST00000594973 NAGSQ8N159 534 aa16.18■□□□□ 0.18
SHKBP1-205ENST00000594973 DEPDC4Q8N2C3 294 aa16.18■□□□□ 0.18
SHKBP1-205ENST00000594973 OR5AK3PQ8NH89 298 aa16.18■□□□□ 0.18
SHKBP1-205ENST00000594973 CXorf40BQ96DE9 158 aa16.18■□□□□ 0.18
SHKBP1-205ENST00000594973 CAMK1GQ96NX5 476 aa16.18■□□□□ 0.18
SHKBP1-205ENST00000594973 TIMM29Q9BSF4 260 aa16.18■□□□□ 0.18
SHKBP1-205ENST00000594973 ROGDIQ9GZN7 287 aa16.18■□□□□ 0.18
SHKBP1-205ENST00000594973 NARFLQ9H6Q4 476 aa16.18■□□□□ 0.18
SHKBP1-205ENST00000594973 MYNNQ9NPC7 610 aa16.18■□□□□ 0.18
SHKBP1-205ENST00000594973 MIEF1Q9NQG6 463 aa16.18■□□□□ 0.18
SHKBP1-205ENST00000594973 GMPPBQ9Y5P6 360 aa16.18■□□□□ 0.18
SHKBP1-205ENST00000594973 M0R082 166 aa16.18■□□□□ 0.18
SHKBP1-205ENST00000594973 OR1F1O43749 312 aa16.18■□□□□ 0.18
SHKBP1-205ENST00000594973 DIRAS1O95057 198 aa16.18■□□□□ 0.18
SHKBP1-205ENST00000594973 SERPIND1P05546 499 aa16.18■□□□□ 0.18
SHKBP1-205ENST00000594973 RFX2P48378 723 aa16.18■□□□□ 0.18
SHKBP1-205ENST00000594973 LIMK1P53667 647 aa16.18■□□□□ 0.18
SHKBP1-205ENST00000594973 PROX2Q3B8N5 592 aa16.18■□□□□ 0.18
SHKBP1-205ENST00000594973 FBXO43Q4G163 708 aa16.18■□□□□ 0.18
SHKBP1-205ENST00000594973 KHDRBS2Q5VWX1 349 aaKnown RBP16.18■□□□□ 0.18
SHKBP1-205ENST00000594973 TIGD3Q6B0B8 471 aa16.18■□□□□ 0.18
SHKBP1-205ENST00000594973 ERICH5Q6P6B1 374 aa16.18■□□□□ 0.18
SHKBP1-205ENST00000594973 RAB42Q8N4Z0 105 aa16.18■□□□□ 0.18
SHKBP1-205ENST00000594973 FBXL6Q8N531 539 aa16.18■□□□□ 0.18
SHKBP1-205ENST00000594973 OMA1Q96E52 524 aa16.18■□□□□ 0.18
SHKBP1-205ENST00000594973 NEDD4LQ96PU5 975 aa16.18■□□□□ 0.18
SHKBP1-205ENST00000594973 TMEM121BQ9BXQ6 578 aaPredicted RBP16.18■□□□□ 0.18
SHKBP1-205ENST00000594973 PELI2Q9HAT8 420 aa16.18■□□□□ 0.18
SHKBP1-205ENST00000594973 FGF22Q9HCT0 170 aa16.18■□□□□ 0.18
SHKBP1-205ENST00000594973 RANGRFQ9HD47 186 aaPredicted RBP16.18■□□□□ 0.18
SHKBP1-205ENST00000594973 WASH6PQ9NQA3 447 aa16.18■□□□□ 0.18
SHKBP1-205ENST00000594973 ZNF282Q9UDV7 671 aaPredicted RBP16.18■□□□□ 0.18
SHKBP1-205ENST00000594973 ABCG2Q9UNQ0 655 aa16.18■□□□□ 0.18
SHKBP1-205ENST00000594973 H0Y8X5 98 aa16.17■□□□□ 0.18
SHKBP1-205ENST00000594973 STATHP02808 62 aa16.17■□□□□ 0.18
SHKBP1-205ENST00000594973 DDX5P17844 614 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 152.1 ms