RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 ERAL1O75616 437 aaKnown RBP11.72□□□□□ -0.53
NPLOC4-213ENST00000573519 ATP6AP2O75787 350 aa11.72□□□□□ -0.53
NPLOC4-213ENST00000573519 LRATO95237 230 aa11.72□□□□□ -0.53
NPLOC4-213ENST00000573519 NADKO95544 446 aaPredicted RBP11.72□□□□□ -0.53
NPLOC4-213ENST00000573519 ESRRBO95718 433 aa11.72□□□□□ -0.53
NPLOC4-213ENST00000573519 CT62P0C5K7 136 aa11.72□□□□□ -0.53
NPLOC4-213ENST00000573519 PORP16435 677 aaPredicted RBP11.72□□□□□ -0.53
NPLOC4-213ENST00000573519 IMPDH1P20839 514 aa11.72□□□□□ -0.53
NPLOC4-213ENST00000573519 GALNSP34059 522 aa11.72□□□□□ -0.53
NPLOC4-213ENST00000573519 MAGEA5P43359 124 aa11.72□□□□□ -0.53
NPLOC4-213ENST00000573519 PRKAA2P54646 552 aa11.72□□□□□ -0.53
NPLOC4-213ENST00000573519 GALNT1Q10472 559 aaPredicted RBP11.72□□□□□ -0.53
NPLOC4-213ENST00000573519 EBPQ15125 230 aaKnown RBP11.72□□□□□ -0.53
NPLOC4-213ENST00000573519 ERCC6LQ2NKX8 1250 aa11.72□□□□□ -0.53
NPLOC4-213ENST00000573519 ZNF791Q3KP31 576 aaPredicted RBP11.72□□□□□ -0.53
NPLOC4-213ENST00000573519 RGS9BPQ6ZS82 235 aa11.72□□□□□ -0.53
NPLOC4-213ENST00000573519 TAGAPQ8N103 731 aa11.72□□□□□ -0.53
NPLOC4-213ENST00000573519 MMP21Q8N119 569 aa11.72□□□□□ -0.53
NPLOC4-213ENST00000573519 C4orf33Q8N1A6 199 aa11.72□□□□□ -0.53
NPLOC4-213ENST00000573519 SLC15A4Q8N697 577 aa11.72□□□□□ -0.53
NPLOC4-213ENST00000573519 TMEM251Q8N6I4 163 aa11.72□□□□□ -0.53
NPLOC4-213ENST00000573519 C1orf52Q8N6N3 182 aaKnown RBP11.72□□□□□ -0.53
NPLOC4-213ENST00000573519 CCNYL1Q8N7R7 359 aa11.72□□□□□ -0.53
NPLOC4-213ENST00000573519 METTL6Q8TCB7 284 aa11.72□□□□□ -0.53
NPLOC4-213ENST00000573519 AENQ8WTP8 325 aaKnown RBP11.72□□□□□ -0.53
NPLOC4-213ENST00000573519 KLHL29Q96CT2 875 aa11.72□□□□□ -0.53
NPLOC4-213ENST00000573519 SPACA9Q96E40 222 aaPredicted RBP11.72□□□□□ -0.53
NPLOC4-213ENST00000573519 JSRP1Q96MG2 331 aaPredicted RBP11.72□□□□□ -0.53
NPLOC4-213ENST00000573519 VKORC1Q9BQB6 163 aa11.72□□□□□ -0.53
NPLOC4-213ENST00000573519 BRINP2Q9C0B6 783 aa11.72□□□□□ -0.53
NPLOC4-213ENST00000573519 OR10A5Q9H207 317 aa11.72□□□□□ -0.53
NPLOC4-213ENST00000573519 RUBCNLQ9H714 662 aa11.72□□□□□ -0.53
NPLOC4-213ENST00000573519 EXO5Q9H790 373 aa11.72□□□□□ -0.53
NPLOC4-213ENST00000573519 CXorf21Q9HAI6 301 aa11.72□□□□□ -0.53
NPLOC4-213ENST00000573519 IL1RL2Q9HB29 575 aa11.72□□□□□ -0.53
NPLOC4-213ENST00000573519 CHST11Q9NPF2 352 aa11.72□□□□□ -0.53
NPLOC4-213ENST00000573519 TUBA8Q9NY65 449 aaPredicted RBP11.72□□□□□ -0.53
NPLOC4-213ENST00000573519 VPS29Q9UBQ0 182 aa11.72□□□□□ -0.53
NPLOC4-213ENST00000573519 PCDHA9Q9Y5H5 950 aa11.72□□□□□ -0.53
NPLOC4-213ENST00000573519 ZGRF1Q86YA3 2104 aa11.72□□□□□ -0.53
NPLOC4-213ENST00000573519 SVILO95425 2214 aa11.71□□□□□ -0.53
NPLOC4-213ENST00000573519 GOLGA6L10A6NI86 522 aa11.71□□□□□ -0.53
NPLOC4-213ENST00000573519 NPIPA2E9PIF3 369 aa11.71□□□□□ -0.53
NPLOC4-213ENST00000573519 NPIPA3F8WFD2 350 aa11.71□□□□□ -0.53
NPLOC4-213ENST00000573519 G3V2L1 256 aa11.71□□□□□ -0.53
NPLOC4-213ENST00000573519 CDH16O75309 829 aa11.71□□□□□ -0.53
NPLOC4-213ENST00000573519 GLRA3O75311 464 aa11.71□□□□□ -0.53
NPLOC4-213ENST00000573519 ULK1O75385 1050 aa11.71□□□□□ -0.53
NPLOC4-213ENST00000573519 GLSO94925 669 aaPredicted RBP11.71□□□□□ -0.53
NPLOC4-213ENST00000573519 CLDN14O95500 239 aa11.71□□□□□ -0.53
NPLOC4-213ENST00000573519 PROCP04070 461 aa11.71□□□□□ -0.53
NPLOC4-213ENST00000573519 CLPSP04118 112 aa11.71□□□□□ -0.53
NPLOC4-213ENST00000573519 CPMP14384 443 aa11.71□□□□□ -0.53
NPLOC4-213ENST00000573519 KRT4P19013 534 aa11.71□□□□□ -0.53
NPLOC4-213ENST00000573519 SERPINB3P29508 390 aa11.71□□□□□ -0.53
NPLOC4-213ENST00000573519 FEN1P39748 380 aaKnown RBP11.71□□□□□ -0.53
NPLOC4-213ENST00000573519 TBL3Q12788 808 aaKnown RBP11.71□□□□□ -0.53
NPLOC4-213ENST00000573519 CSTF3Q12996 717 aaKnown RBP11.71□□□□□ -0.53
NPLOC4-213ENST00000573519 ZNF630Q2M218 657 aaPredicted RBP11.71□□□□□ -0.53
NPLOC4-213ENST00000573519 FAM180BQ6P0A1 224 aa11.71□□□□□ -0.53
NPLOC4-213ENST00000573519 SLC48A1Q6P1K1 146 aa11.71□□□□□ -0.53
NPLOC4-213ENST00000573519 WDR93Q6P2C0 686 aa11.71□□□□□ -0.53
NPLOC4-213ENST00000573519 LYPD8Q6UX82 237 aa11.71□□□□□ -0.53
NPLOC4-213ENST00000573519 ZYG11AQ6WRX3 759 aa11.71□□□□□ -0.53
NPLOC4-213ENST00000573519 TMEM64Q6YI46 380 aa11.71□□□□□ -0.53
NPLOC4-213ENST00000573519 FAM109AQ8N4B1 249 aa11.71□□□□□ -0.53
NPLOC4-213ENST00000573519 OR10G3Q8NGC4 313 aa11.71□□□□□ -0.53
NPLOC4-213ENST00000573519 PHF10Q8WUB8 498 aaKnown RBP11.71□□□□□ -0.53
NPLOC4-213ENST00000573519 SDCCAG3Q96C92 435 aa11.71□□□□□ -0.53
NPLOC4-213ENST00000573519 ZNF382Q96SR6 550 aa11.71□□□□□ -0.53
NPLOC4-213ENST00000573519 FAIM2Q9BWQ8 316 aa11.71□□□□□ -0.53
NPLOC4-213ENST00000573519 PARD6BQ9BYG5 372 aa11.71□□□□□ -0.53
NPLOC4-213ENST00000573519 TP63Q9H3D4 680 aaPredicted RBP11.71□□□□□ -0.53
NPLOC4-213ENST00000573519 LDAHQ9H6V9 325 aa11.71□□□□□ -0.53
NPLOC4-213ENST00000573519 ZDHHC11Q9H8X9 412 aa11.71□□□□□ -0.53
NPLOC4-213ENST00000573519 PPCSQ9HAB8 311 aa11.71□□□□□ -0.53
NPLOC4-213ENST00000573519 PFDN4Q9NQP4 134 aa11.71□□□□□ -0.53
NPLOC4-213ENST00000573519 COQ3Q9NZJ6 369 aa11.71□□□□□ -0.53
NPLOC4-213ENST00000573519 BCAP29Q9UHQ4 241 aa11.71□□□□□ -0.53
NPLOC4-213ENST00000573519 STK38LQ9Y2H1 464 aa11.71□□□□□ -0.53
NPLOC4-213ENST00000573519 LIPGQ9Y5X9 500 aa11.71□□□□□ -0.53
NPLOC4-213ENST00000573519 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.71□□□□□ -0.53
NPLOC4-213ENST00000573519 SPTBN1Q01082 2364 aaKnown RBP11.71□□□□□ -0.54
NPLOC4-213ENST00000573519 POLEQ07864 2286 aa11.71□□□□□ -0.54
NPLOC4-213ENST00000573519 UNC79Q9P2D8 2635 aa11.7□□□□□ -0.54
NPLOC4-213ENST00000573519 GNG14A0A1W2PPG7 69 aa11.7□□□□□ -0.54
NPLOC4-213ENST00000573519 COPEO14579 308 aa11.7□□□□□ -0.54
NPLOC4-213ENST00000573519 ADAM10O14672 748 aa11.7□□□□□ -0.54
NPLOC4-213ENST00000573519 PLIN3O60664 434 aa11.7□□□□□ -0.54
NPLOC4-213ENST00000573519 CELA3AP09093 270 aa11.7□□□□□ -0.54
NPLOC4-213ENST00000573519 FBXO45P0C2W1 286 aa11.7□□□□□ -0.54
NPLOC4-213ENST00000573519 MYL2P10916 166 aa11.7□□□□□ -0.54
NPLOC4-213ENST00000573519 HSD3B1P14060 373 aa11.7□□□□□ -0.54
NPLOC4-213ENST00000573519 COX6B1P14854 86 aa11.7□□□□□ -0.54
NPLOC4-213ENST00000573519 CHN1P15882 459 aa11.7□□□□□ -0.54
NPLOC4-213ENST00000573519 AGAP20933 346 aa11.7□□□□□ -0.54
NPLOC4-213ENST00000573519 HSD3B2P26439 372 aa11.7□□□□□ -0.54
NPLOC4-213ENST00000573519 CRHR1P34998 444 aa11.7□□□□□ -0.54
NPLOC4-213ENST00000573519 CCT5P48643 541 aa11.7□□□□□ -0.54
NPLOC4-213ENST00000573519 HTR6P50406 440 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms