RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 GTF3C1Q12789 2109 aa15.46■□□□□ 0.07
USB1-211ENST00000565662 MYO7BQ6PIF6 2116 aa15.46■□□□□ 0.07
USB1-211ENST00000565662 UNC79Q9P2D8 2635 aa15.46■□□□□ 0.07
USB1-211ENST00000565662 MANBAO00462 879 aa15.46■□□□□ 0.07
USB1-211ENST00000565662 ACOX3O15254 700 aa15.46■□□□□ 0.07
USB1-211ENST00000565662 HS6ST1O60243 411 aa15.46■□□□□ 0.07
USB1-211ENST00000565662 DLX3O60479 287 aa15.46■□□□□ 0.07
USB1-211ENST00000565662 HCN1O60741 890 aa15.46■□□□□ 0.07
USB1-211ENST00000565662 OR4F21O95013 312 aa15.46■□□□□ 0.07
USB1-211ENST00000565662 SBK3P0C264 359 aa15.46■□□□□ 0.07
USB1-211ENST00000565662 NAGAP17050 411 aa15.46■□□□□ 0.07
USB1-211ENST00000565662 CRHR1P34998 444 aa15.46■□□□□ 0.07
USB1-211ENST00000565662 XKP51811 444 aa15.46■□□□□ 0.07
USB1-211ENST00000565662 CDH13P55290 713 aa15.46■□□□□ 0.07
USB1-211ENST00000565662 DNAJB13P59910 316 aa15.46■□□□□ 0.07
USB1-211ENST00000565662 GPR85P60893 370 aa15.46■□□□□ 0.07
USB1-211ENST00000565662 PPIAP62937 165 aaKnown RBP15.46■□□□□ 0.07
USB1-211ENST00000565662 RPS6KA2Q15349 733 aa15.46■□□□□ 0.07
USB1-211ENST00000565662 ZNF791Q3KP31 576 aaPredicted RBP15.46■□□□□ 0.07
USB1-211ENST00000565662 CMPK2Q5EBM0 449 aa15.46■□□□□ 0.07
USB1-211ENST00000565662 CFAP157Q5JU67 520 aa15.46■□□□□ 0.07
USB1-211ENST00000565662 ZYG11AQ6WRX3 759 aa15.46■□□□□ 0.07
USB1-211ENST00000565662 ACAD11Q709F0 780 aa15.46■□□□□ 0.07
USB1-211ENST00000565662 CDYL2Q8N8U2 506 aa15.46■□□□□ 0.07
USB1-211ENST00000565662 FAM76AQ8TAV0 307 aa15.46■□□□□ 0.07
USB1-211ENST00000565662 AGAP11Q8TF27 550 aa15.46■□□□□ 0.07
USB1-211ENST00000565662 ASB5Q8WWX0 329 aa15.46■□□□□ 0.07
USB1-211ENST00000565662 SREK1Q8WXA9 508 aaKnown RBP15.46■□□□□ 0.07
USB1-211ENST00000565662 TRMOQ9BU70 441 aa15.46■□□□□ 0.07
USB1-211ENST00000565662 TSPAN10Q9H1Z9 355 aaPredicted RBP15.46■□□□□ 0.07
USB1-211ENST00000565662 SIRT5Q9NXA8 310 aa15.46■□□□□ 0.07
USB1-211ENST00000565662 TEX10Q9NXF1 929 aaPredicted RBP15.46■□□□□ 0.07
USB1-211ENST00000565662 TBK1Q9UHD2 729 aa15.46■□□□□ 0.07
USB1-211ENST00000565662 SH3BGRL2Q9UJC5 107 aa15.46■□□□□ 0.07
USB1-211ENST00000565662 TINAGQ9UJW2 476 aa15.46■□□□□ 0.07
USB1-211ENST00000565662 NCOA6Q14686 2063 aaPredicted RBP15.46■□□□□ 0.07
USB1-211ENST00000565662 CROCCQ5TZA2 2017 aa15.45■□□□□ 0.06
USB1-211ENST00000565662 COPEO14579 308 aa15.45■□□□□ 0.06
USB1-211ENST00000565662 CDC40O60508 579 aaKnown RBP eCLIP15.45■□□□□ 0.06
USB1-211ENST00000565662 CRCPO75575 148 aa15.45■□□□□ 0.06
USB1-211ENST00000565662 GLSO94925 669 aaPredicted RBP15.45■□□□□ 0.06
USB1-211ENST00000565662 SNX4O95219 450 aa15.45■□□□□ 0.06
USB1-211ENST00000565662 CLDN14O95500 239 aa15.45■□□□□ 0.06
USB1-211ENST00000565662 IGHG3P01860 377 aa15.45■□□□□ 0.06
USB1-211ENST00000565662 TPOP07202 933 aa15.45■□□□□ 0.06
USB1-211ENST00000565662 FAM153BP0C7A2 387 aa15.45■□□□□ 0.06
USB1-211ENST00000565662 DDX5P17844 614 aaKnown RBP15.45■□□□□ 0.06
USB1-211ENST00000565662 NT5EP21589 574 aa15.45■□□□□ 0.06
USB1-211ENST00000565662 KCNJ2P63252 427 aa15.45■□□□□ 0.06
USB1-211ENST00000565662 GALNT1Q10472 559 aaPredicted RBP15.45■□□□□ 0.06
USB1-211ENST00000565662 MAP4K2Q12851 820 aa15.45■□□□□ 0.06
USB1-211ENST00000565662 SF3B4Q15427 424 aaKnown RBP eCLIP15.45■□□□□ 0.064e-17■■■■■ 82.4
USB1-211ENST00000565662 ZNF630Q2M218 657 aaPredicted RBP15.45■□□□□ 0.06
USB1-211ENST00000565662 FAM153CQ494X1 144 aa15.45■□□□□ 0.06
USB1-211ENST00000565662 UNC50Q53HI1 259 aa15.45■□□□□ 0.06
USB1-211ENST00000565662 SGO1Q5FBB7 561 aa15.45■□□□□ 0.06
USB1-211ENST00000565662 GALNT18Q6P9A2 607 aa15.45■□□□□ 0.06
USB1-211ENST00000565662 LRRC25Q8N386 305 aaPredicted RBP15.45■□□□□ 0.06
USB1-211ENST00000565662 AMER2Q8N7J2 671 aa15.45■□□□□ 0.06
USB1-211ENST00000565662 MZB1Q8WU39 189 aa15.45■□□□□ 0.06
USB1-211ENST00000565662 PPWD1Q96BP3 646 aaKnown RBP15.45■□□□□ 0.06
USB1-211ENST00000565662 SARAFQ96BY9 339 aa15.45■□□□□ 0.06
USB1-211ENST00000565662 KLHL29Q96CT2 875 aa15.45■□□□□ 0.06
USB1-211ENST00000565662 HSPBAP1Q96EW2 488 aa15.45■□□□□ 0.06
USB1-211ENST00000565662 ZNF597Q96LX8 424 aa15.45■□□□□ 0.06
USB1-211ENST00000565662 STMN4Q9H169 189 aaPredicted RBP15.45■□□□□ 0.06
USB1-211ENST00000565662 OR10A5Q9H207 317 aa15.45■□□□□ 0.06
USB1-211ENST00000565662 SLC24A3Q9HC58 644 aa15.45■□□□□ 0.06
USB1-211ENST00000565662 SH2D2AQ9NP31 389 aa15.45■□□□□ 0.06
USB1-211ENST00000565662 MKS1Q9NXB0 559 aa15.45■□□□□ 0.06
USB1-211ENST00000565662 GNG14A0A1W2PPG7 69 aa15.44■□□□□ 0.06
USB1-211ENST00000565662 GLOD5A6NK44 160 aa15.44■□□□□ 0.06
USB1-211ENST00000565662 AQP7O14520 342 aa15.44■□□□□ 0.06
USB1-211ENST00000565662 PCDH7O60245 1069 aa15.44■□□□□ 0.06
USB1-211ENST00000565662 GBAP04062 536 aa15.44■□□□□ 0.06
USB1-211ENST00000565662 IMPG1Q17R60 797 aa15.44■□□□□ 0.06
USB1-211ENST00000565662 RNFT1Q5M7Z0 435 aa15.44■□□□□ 0.06
USB1-211ENST00000565662 TMEM81Q6P7N7 255 aa15.44■□□□□ 0.06
USB1-211ENST00000565662 CD163Q86VB7 1156 aa15.44■□□□□ 0.06
USB1-211ENST00000565662 C1orf52Q8N6N3 182 aaKnown RBP15.44■□□□□ 0.06
USB1-211ENST00000565662 ZNF321PQ8N8H1 164 aa15.44■□□□□ 0.06
USB1-211ENST00000565662 CCDC63Q8NA47 563 aa15.44■□□□□ 0.06
USB1-211ENST00000565662 FAM13CQ8NE31 585 aa15.44■□□□□ 0.06
USB1-211ENST00000565662 ZNF675Q8TD23 568 aa15.44■□□□□ 0.06
USB1-211ENST00000565662 CHTF18Q8WVB6 975 aa15.44■□□□□ 0.06
USB1-211ENST00000565662 EPB41L4BQ9H329 900 aa15.44■□□□□ 0.06
USB1-211ENST00000565662 ZFP64Q9NPA5 681 aa15.44■□□□□ 0.06
USB1-211ENST00000565662 RRAGDQ9NQL2 400 aaPredicted RBP15.44■□□□□ 0.06
USB1-211ENST00000565662 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.44■□□□□ 0.06
USB1-211ENST00000565662 A0A1B0GTH9 108 aa15.43■□□□□ 0.06
USB1-211ENST00000565662 MYOCOSA0A1B0GUC4 107 aa15.43■□□□□ 0.06
USB1-211ENST00000565662 A0A1B0GVC2 190 aa15.43■□□□□ 0.06
USB1-211ENST00000565662 GOLGA8RI6L899 631 aa15.43■□□□□ 0.06
USB1-211ENST00000565662 ABCB7O75027 752 aa15.43■□□□□ 0.06
USB1-211ENST00000565662 WDR1O75083 606 aa15.43■□□□□ 0.06
USB1-211ENST00000565662 PRKRAO75569 313 aaKnown RBP15.43■□□□□ 0.06
USB1-211ENST00000565662 NADKO95544 446 aaPredicted RBP15.43■□□□□ 0.06
USB1-211ENST00000565662 CHEK2O96017 543 aa15.43■□□□□ 0.06
USB1-211ENST00000565662 NEFHP12036 1026 aa15.43■□□□□ 0.06
USB1-211ENST00000565662 GABRA1P14867 456 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms