RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 BIKQ13323 160 aa12.96□□□□□ -0.33
TPM1-215ENST00000558868 MED21Q13503 144 aa12.96□□□□□ -0.33
TPM1-215ENST00000558868 NKG7Q16617 165 aa12.96□□□□□ -0.33
TPM1-215ENST00000558868 CLPPQ16740 277 aaPredicted RBP12.96□□□□□ -0.33
TPM1-215ENST00000558868 ZNF750Q32MQ0 723 aa12.96□□□□□ -0.33
TPM1-215ENST00000558868 YOD1Q5VVQ6 348 aaPredicted RBP12.96□□□□□ -0.33
TPM1-215ENST00000558868 PRAMEF8Q5VWM4 474 aa12.96□□□□□ -0.33
TPM1-215ENST00000558868 PRAMEF7Q5VXH5 474 aa12.96□□□□□ -0.33
TPM1-215ENST00000558868 TMEM71Q6P5X7 295 aa12.96□□□□□ -0.33
TPM1-215ENST00000558868 TLDC1Q6P9B6 456 aa12.96□□□□□ -0.33
TPM1-215ENST00000558868 TMEM107Q6UX40 140 aa12.96□□□□□ -0.33
TPM1-215ENST00000558868 PRSS41Q7RTY9 318 aa12.96□□□□□ -0.33
TPM1-215ENST00000558868 PIWIL3Q7Z3Z3 882 aaKnown RBP12.96□□□□□ -0.33
TPM1-215ENST00000558868 KRT73Q86Y46 540 aa12.96□□□□□ -0.33
TPM1-215ENST00000558868 GATAD2AQ86YP4 633 aa12.96□□□□□ -0.33
TPM1-215ENST00000558868 ZNF595Q8IYB9 648 aa12.96□□□□□ -0.33
TPM1-215ENST00000558868 D2HGDHQ8N465 521 aa12.96□□□□□ -0.33
TPM1-215ENST00000558868 ZBTB44Q8NCP5 570 aa12.96□□□□□ -0.33
TPM1-215ENST00000558868 OR9A2Q8NGT5 310 aa12.96□□□□□ -0.33
TPM1-215ENST00000558868 MVB12AQ96EY5 273 aa12.96□□□□□ -0.33
TPM1-215ENST00000558868 TPD52L3Q96J77 140 aa12.96□□□□□ -0.33
TPM1-215ENST00000558868 LOXL4Q96JB6 756 aa12.96□□□□□ -0.33
TPM1-215ENST00000558868 SLC41A2Q96JW4 573 aa12.96□□□□□ -0.33
TPM1-215ENST00000558868 NR1H4Q96RI1 486 aaPredicted RBP12.96□□□□□ -0.33
TPM1-215ENST00000558868 CSF3RQ99062 836 aa12.96□□□□□ -0.33
TPM1-215ENST00000558868 SPATA5L1Q9BVQ7 753 aa12.96□□□□□ -0.33
TPM1-215ENST00000558868 OSBPL11Q9BXB4 747 aa12.96□□□□□ -0.33
TPM1-215ENST00000558868 OR51I1Q9H343 314 aa12.96□□□□□ -0.33
TPM1-215ENST00000558868 DDX18Q9NVP1 670 aaKnown RBP12.96□□□□□ -0.33
TPM1-215ENST00000558868 CALML5Q9NZT1 146 aa12.96□□□□□ -0.33
TPM1-215ENST00000558868 ZNF639Q9UID6 485 aa12.96□□□□□ -0.33
TPM1-215ENST00000558868 OAZ3Q9UMX2 235 aa12.96□□□□□ -0.33
TPM1-215ENST00000558868 CDC14AQ9UNH5 594 aa12.96□□□□□ -0.33
TPM1-215ENST00000558868 LIPT1Q9Y234 373 aa12.96□□□□□ -0.33
TPM1-215ENST00000558868 A0A087WV62 115 aa12.95□□□□□ -0.34
TPM1-215ENST00000558868 A0A0A6YYC8 382 aaPredicted RBP12.95□□□□□ -0.34
TPM1-215ENST00000558868 I3L1I5 382 aaPredicted RBP12.95□□□□□ -0.34
TPM1-215ENST00000558868 M0QX08 132 aa12.95□□□□□ -0.34
TPM1-215ENST00000558868 CLDN4O14493 209 aa12.95□□□□□ -0.34
TPM1-215ENST00000558868 DENRO43583 198 aaKnown RBP12.95□□□□□ -0.34
TPM1-215ENST00000558868 FOXS1O43638 330 aa12.95□□□□□ -0.34
TPM1-215ENST00000558868 SIGLEC6O43699 453 aa12.95□□□□□ -0.34
TPM1-215ENST00000558868 PCDHGA12O60330 932 aa12.95□□□□□ -0.34
TPM1-215ENST00000558868 DPM1O60762 260 aa12.95□□□□□ -0.34
TPM1-215ENST00000558868 B4GALT2O60909 372 aa12.95□□□□□ -0.34
TPM1-215ENST00000558868 SERPINB7O75635 380 aa12.95□□□□□ -0.34
TPM1-215ENST00000558868 OR2B3O76000 313 aa12.95□□□□□ -0.34
TPM1-215ENST00000558868 SOX30O94993 753 aa12.95□□□□□ -0.34
TPM1-215ENST00000558868 MT-ND1P03886 318 aa12.95□□□□□ -0.34
TPM1-215ENST00000558868 SEMG1P04279 462 aa12.95□□□□□ -0.34
TPM1-215ENST00000558868 ATP1B1P05026 303 aa12.95□□□□□ -0.34
TPM1-215ENST00000558868 RPSAP08865 295 aaKnown RBP12.95□□□□□ -0.34
TPM1-215ENST00000558868 TFPTP0C1Z6 253 aa12.95□□□□□ -0.34
TPM1-215ENST00000558868 NR2F1P10589 423 aa12.95□□□□□ -0.34
TPM1-215ENST00000558868 ITGA2P17301 1181 aa12.95□□□□□ -0.34
TPM1-215ENST00000558868 CKMT2P17540 419 aa12.95□□□□□ -0.34
TPM1-215ENST00000558868 NELFEP18615 380 aaKnown RBP12.95□□□□□ -0.34
TPM1-215ENST00000558868 AQP1P29972 269 aa12.95□□□□□ -0.34
TPM1-215ENST00000558868 MC3RP41968 323 aa12.95□□□□□ -0.34
TPM1-215ENST00000558868 ARHGDIAP52565 204 aa12.95□□□□□ -0.34
TPM1-215ENST00000558868 FOLH1Q04609 750 aa12.95□□□□□ -0.34
TPM1-215ENST00000558868 DUSP2Q05923 314 aa12.95□□□□□ -0.34
TPM1-215ENST00000558868 IFI44LQ53G44 452 aa12.95□□□□□ -0.34
TPM1-215ENST00000558868 TRIM61Q5EBN2 209 aa12.95□□□□□ -0.34
TPM1-215ENST00000558868 ATAD3BQ5T9A4 648 aa12.95□□□□□ -0.34
TPM1-215ENST00000558868 HIPK1Q86Z02 1210 aa12.95□□□□□ -0.34
TPM1-215ENST00000558868 ZDHHC13Q8IUH4 622 aa12.95□□□□□ -0.34
TPM1-215ENST00000558868 ARMC8Q8IUR7 673 aa12.95□□□□□ -0.34
TPM1-215ENST00000558868 GPR135Q8IZ08 494 aa12.95□□□□□ -0.34
TPM1-215ENST00000558868 LGI4Q8N135 537 aa12.95□□□□□ -0.34
TPM1-215ENST00000558868 CBR4Q8N4T8 237 aa12.95□□□□□ -0.34
TPM1-215ENST00000558868 OR5T3Q8NGG3 340 aa12.95□□□□□ -0.34
TPM1-215ENST00000558868 OR5K1Q8NHB7 308 aa12.95□□□□□ -0.34
TPM1-215ENST00000558868 BBS10Q8TAM1 723 aa12.95□□□□□ -0.34
TPM1-215ENST00000558868 SLC38A5Q8WUX1 472 aa12.95□□□□□ -0.34
TPM1-215ENST00000558868 TMBIM1Q969X1 311 aa12.95□□□□□ -0.34
TPM1-215ENST00000558868 MAGED4Q96JG8 741 aa12.95□□□□□ -0.34
TPM1-215ENST00000558868 MS4A4EQ96PG1 132 aa12.95□□□□□ -0.34
TPM1-215ENST00000558868 ZNF347Q96SE7 839 aa12.95□□□□□ -0.34
TPM1-215ENST00000558868 OSBPL10Q9BXB5 764 aa12.95□□□□□ -0.34
TPM1-215ENST00000558868 TMEM121BQ9BXQ6 578 aaPredicted RBP12.95□□□□□ -0.34
TPM1-215ENST00000558868 ACTRT3Q9BYD9 372 aa12.95□□□□□ -0.34
TPM1-215ENST00000558868 ZNF768Q9H5H4 540 aaKnown RBP12.95□□□□□ -0.34
TPM1-215ENST00000558868 SERTAD3Q9UJW9 196 aa12.95□□□□□ -0.34
TPM1-215ENST00000558868 CHD8Q9HCK8 2581 aa12.95□□□□□ -0.34
TPM1-215ENST00000558868 CACNA1EQ15878 2313 aa12.95□□□□□ -0.34
TPM1-215ENST00000558868 CPED1A4D0V7 1026 aa12.94□□□□□ -0.34
TPM1-215ENST00000558868 EME2A4GXA9 379 aaPredicted RBP12.94□□□□□ -0.34
TPM1-215ENST00000558868 G3V2T6 193 aa12.94□□□□□ -0.34
TPM1-215ENST00000558868 SLC28A2O43868 658 aa12.94□□□□□ -0.34
TPM1-215ENST00000558868 GFRA3O60609 400 aa12.94□□□□□ -0.34
TPM1-215ENST00000558868 CTNSO60931 367 aa12.94□□□□□ -0.34
TPM1-215ENST00000558868 DNAJB6O75190 326 aa12.94□□□□□ -0.34
TPM1-215ENST00000558868 GCM2O75603 506 aaPredicted RBP12.94□□□□□ -0.34
TPM1-215ENST00000558868 PGM3O95394 542 aa12.94□□□□□ -0.34
TPM1-215ENST00000558868 HPRP00739 348 aa12.94□□□□□ -0.34
TPM1-215ENST00000558868 HMGN2P05204 90 aaKnown RBP12.94□□□□□ -0.34
TPM1-215ENST00000558868 BCHEP06276 602 aa12.94□□□□□ -0.34
TPM1-215ENST00000558868 ANKRD34CP0C6C1 535 aa12.94□□□□□ -0.34
TPM1-215ENST00000558868 SLC35E2P0CK97 266 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms