RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 ZNF721Q8TF20 911 aa14.89□□□□□ -0.03
SSBP1-214ENST00000498107 GFM2Q969S9 779 aaKnown RBP14.89□□□□□ -0.03
SSBP1-214ENST00000498107 ERP27Q96DN0 273 aa14.89□□□□□ -0.03
SSBP1-214ENST00000498107 CCDC134Q9H6E4 229 aa14.89□□□□□ -0.03
SSBP1-214ENST00000498107 WDR55Q9H6Y2 383 aaPredicted RBP14.89□□□□□ -0.03
SSBP1-214ENST00000498107 SH3BP4Q9P0V3 963 aa14.89□□□□□ -0.03
SSBP1-214ENST00000498107 ATP6V1HQ9UI12 483 aa14.89□□□□□ -0.03
SSBP1-214ENST00000498107 ERVK-19Q9WJR5 959 aa14.89□□□□□ -0.03
SSBP1-214ENST00000498107 CFL2Q9Y281 166 aa14.89□□□□□ -0.03
SSBP1-214ENST00000498107 IGSF10Q6WRI0 2623 aa14.88□□□□□ -0.03
SSBP1-214ENST00000498107 GOLGA8QA0A0J9YX86 632 aa14.88□□□□□ -0.03
SSBP1-214ENST00000498107 DYTNA2CJ06 578 aa14.88□□□□□ -0.03
SSBP1-214ENST00000498107 GOLGA8OA6NCC3 632 aa14.88□□□□□ -0.03
SSBP1-214ENST00000498107 OR6C76A6NM76 312 aa14.88□□□□□ -0.03
SSBP1-214ENST00000498107 MYO1GB0I1T2 1018 aa14.88□□□□□ -0.03
SSBP1-214ENST00000498107 GOLGA8NF8WBI6 632 aa14.88□□□□□ -0.03
SSBP1-214ENST00000498107 FCHO1O14526 889 aa14.88□□□□□ -0.03
SSBP1-214ENST00000498107 ZNF195O14628 629 aa14.88□□□□□ -0.03
SSBP1-214ENST00000498107 SCAMP2O15127 329 aaKnown RBP14.88□□□□□ -0.03
SSBP1-214ENST00000498107 POLR3GO15318 223 aaPredicted RBP14.88□□□□□ -0.03
SSBP1-214ENST00000498107 PDPK1O15530 556 aa14.88□□□□□ -0.03
SSBP1-214ENST00000498107 EDF1O60869 148 aaKnown RBP14.88□□□□□ -0.03
SSBP1-214ENST00000498107 IGKV3-11P04433 115 aa14.88□□□□□ -0.03
SSBP1-214ENST00000498107 IDO1P14902 403 aa14.88□□□□□ -0.03
SSBP1-214ENST00000498107 MDH1P40925 334 aaKnown RBP14.88□□□□□ -0.03
SSBP1-214ENST00000498107 C21orf58P58505 322 aa14.88□□□□□ -0.03
SSBP1-214ENST00000498107 FUT7Q11130 342 aa14.88□□□□□ -0.03
SSBP1-214ENST00000498107 ZNF750Q32MQ0 723 aa14.88□□□□□ -0.03
SSBP1-214ENST00000498107 ACER2Q5QJU3 275 aa14.88□□□□□ -0.03
SSBP1-214ENST00000498107 CPTPQ5TA50 214 aa14.88□□□□□ -0.03
SSBP1-214ENST00000498107 IGFL2Q6UWQ7 119 aa14.88□□□□□ -0.03
SSBP1-214ENST00000498107 RNF111Q6ZNA4 994 aa14.88□□□□□ -0.03
SSBP1-214ENST00000498107 SLC29A4Q7RTT9 530 aa14.88□□□□□ -0.03
SSBP1-214ENST00000498107 VWA5B2Q8N398 1253 aa14.88□□□□□ -0.03
SSBP1-214ENST00000498107 SLC39A7Q92504 469 aa14.88□□□□□ -0.03
SSBP1-214ENST00000498107 ZBED6CLQ96FA7 236 aaPredicted RBP14.88□□□□□ -0.03
SSBP1-214ENST00000498107 DPY30Q9C005 99 aa14.88□□□□□ -0.03
SSBP1-214ENST00000498107 BRINP2Q9C0B6 783 aa14.88□□□□□ -0.03
SSBP1-214ENST00000498107 RNF32Q9H0A6 362 aa14.88□□□□□ -0.03
SSBP1-214ENST00000498107 ZNF71Q9NQZ8 489 aaPredicted RBP14.88□□□□□ -0.03
SSBP1-214ENST00000498107 STMN3Q9NZ72 180 aa14.88□□□□□ -0.03
SSBP1-214ENST00000498107 EXO1Q9UQ84 846 aaKnown RBP14.88□□□□□ -0.03
SSBP1-214ENST00000498107 CNTRLQ7Z7A1 2325 aa14.88□□□□□ -0.03
SSBP1-214ENST00000498107 TLN1Q9Y490 2541 aaKnown RBP14.88□□□□□ -0.03
SSBP1-214ENST00000498107 SPTA1P02549 2419 aa14.87□□□□□ -0.03
SSBP1-214ENST00000498107 A0A1W2PS29 197 aa14.87□□□□□ -0.03
SSBP1-214ENST00000498107 EIF4E1BA6NMX2 242 aaKnown RBP14.87□□□□□ -0.03
SSBP1-214ENST00000498107 GABRR3A8MPY1 467 aa14.87□□□□□ -0.03
SSBP1-214ENST00000498107 NCBP2P52298 156 aaKnown RBP eCLIP14.87□□□□□ -0.032e-8■□□□□ 9.2
SSBP1-214ENST00000498107 CLNS1AP54105 237 aaKnown RBP14.87□□□□□ -0.03
SSBP1-214ENST00000498107 AQP5P55064 265 aa14.87□□□□□ -0.03
SSBP1-214ENST00000498107 DIO3P55073 304 aa14.87□□□□□ -0.03
SSBP1-214ENST00000498107 GUCY1A3Q02108 690 aa14.87□□□□□ -0.03
SSBP1-214ENST00000498107 RPS6KA2Q15349 733 aa14.87□□□□□ -0.03
SSBP1-214ENST00000498107 GSTA3Q16772 222 aa14.87□□□□□ -0.03
SSBP1-214ENST00000498107 DPY19L1Q2PZI1 675 aa14.87□□□□□ -0.03
SSBP1-214ENST00000498107 PRICKLE4Q2TBC4 344 aa14.87□□□□□ -0.03
SSBP1-214ENST00000498107 SLC9B1Q4ZJI4 515 aa14.87□□□□□ -0.03
SSBP1-214ENST00000498107 DGAT2L6Q6ZPD8 337 aa14.87□□□□□ -0.03
SSBP1-214ENST00000498107 LINC00696Q6ZRV3 163 aa14.87□□□□□ -0.03
SSBP1-214ENST00000498107 MAVSQ7Z434 540 aa14.87□□□□□ -0.03
SSBP1-214ENST00000498107 ARMC10Q8N2F6 343 aa14.87□□□□□ -0.03
SSBP1-214ENST00000498107 KIF2BQ8N4N8 673 aa14.87□□□□□ -0.03
SSBP1-214ENST00000498107 NUBPLQ8TB37 319 aa14.87□□□□□ -0.03
SSBP1-214ENST00000498107 STON2Q8WXE9 905 aa14.87□□□□□ -0.03
SSBP1-214ENST00000498107 CCDC28BQ9BUN5 200 aa14.87□□□□□ -0.03
SSBP1-214ENST00000498107 TCF7L2Q9NQB0 619 aa14.87□□□□□ -0.03
SSBP1-214ENST00000498107 ACSS1Q9NUB1 689 aaPredicted RBP14.87□□□□□ -0.03
SSBP1-214ENST00000498107 MAT2BQ9NZL9 334 aa14.87□□□□□ -0.03
SSBP1-214ENST00000498107 NBEAQ8NFP9 2946 aa14.86□□□□□ -0.03
SSBP1-214ENST00000498107 UBDO15205 165 aa14.86□□□□□ -0.03
SSBP1-214ENST00000498107 VIMP08670 466 aaKnown RBP14.86□□□□□ -0.03
SSBP1-214ENST00000498107 IFI6P09912 130 aa14.86□□□□□ -0.03
SSBP1-214ENST00000498107 TROVE2P10155 538 aaKnown RBP eCLIP14.86□□□□□ -0.03
SSBP1-214ENST00000498107 CASRP41180 1078 aa14.86□□□□□ -0.03
SSBP1-214ENST00000498107 SLC37A1P57057 533 aa14.86□□□□□ -0.03
SSBP1-214ENST00000498107 MLF1P58340 268 aa14.86□□□□□ -0.03
SSBP1-214ENST00000498107 RNF4P78317 190 aa14.86□□□□□ -0.03
SSBP1-214ENST00000498107 IRX1P78414 480 aaPredicted RBP14.86□□□□□ -0.03
SSBP1-214ENST00000498107 ARG2P78540 354 aa14.86□□□□□ -0.03
SSBP1-214ENST00000498107 SRSF11Q05519 484 aaKnown RBP14.86□□□□□ -0.03
SSBP1-214ENST00000498107 HLA-DQA1Q5Y7H0 255 aa14.86□□□□□ -0.03
SSBP1-214ENST00000498107 B3GNTL1Q67FW5 361 aaPredicted RBP14.86□□□□□ -0.03
SSBP1-214ENST00000498107 FAM180BQ6P0A1 224 aa14.86□□□□□ -0.03
SSBP1-214ENST00000498107 RIMKLAQ8IXN7 391 aa14.86□□□□□ -0.03
SSBP1-214ENST00000498107 OR9A2Q8NGT5 310 aa14.86□□□□□ -0.03
SSBP1-214ENST00000498107 HAS2Q92819 552 aa14.86□□□□□ -0.03
SSBP1-214ENST00000498107 CTHRC1Q96CG8 243 aa14.86□□□□□ -0.03
SSBP1-214ENST00000498107 AMDHD1Q96NU7 426 aa14.86□□□□□ -0.03
SSBP1-214ENST00000498107 OR10A5Q9H207 317 aa14.86□□□□□ -0.03
SSBP1-214ENST00000498107 CDCP1Q9H5V8 836 aa14.86□□□□□ -0.03
SSBP1-214ENST00000498107 AIG1Q9NVV5 245 aa14.86□□□□□ -0.03
SSBP1-214ENST00000498107 PRODH2Q9UF12 536 aa14.86□□□□□ -0.03
SSBP1-214ENST00000498107 ZNF223Q9UK11 482 aaPredicted RBP14.86□□□□□ -0.03
SSBP1-214ENST00000498107 ATRXP46100 2492 aa14.86□□□□□ -0.03
SSBP1-214ENST00000498107 PLOD3O60568 738 aa14.85□□□□□ -0.03
SSBP1-214ENST00000498107 PRAMEF2O60811 474 aa14.85□□□□□ -0.03
SSBP1-214ENST00000498107 IDH3AP50213 366 aa14.85□□□□□ -0.03
SSBP1-214ENST00000498107 MANFP55145 182 aaKnown RBP14.85□□□□□ -0.03
SSBP1-214ENST00000498107 MGAT2Q10469 447 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms