RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 SP140LQ9H930 580 aa4.13□□□□□ -1.75
HMGB1P16-201ENST00000447155 TBC1D17Q9HA65 648 aa4.13□□□□□ -1.75
HMGB1P16-201ENST00000447155 FBXO6Q9NRD1 293 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P16-201ENST00000447155 SLC38A7Q9NVC3 462 aa4.13□□□□□ -1.75
HMGB1P16-201ENST00000447155 ANKMY1Q9P2S6 941 aa4.13□□□□□ -1.75
HMGB1P16-201ENST00000447155 STOML2Q9UJZ1 356 aa4.13□□□□□ -1.75
HMGB1P16-201ENST00000447155 CAB39Q9Y376 341 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P16-201ENST00000447155 PCDHGB1Q9Y5G3 927 aa4.13□□□□□ -1.75
HMGB1P16-201ENST00000447155 SPIN1Q9Y657 262 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P16-201ENST00000447155 MN1Q10571 1320 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P16-201ENST00000447155 CACNA1SQ13698 1873 aa4.13□□□□□ -1.75
HMGB1P16-201ENST00000447155 NUP98P52948 1817 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 TEX13DA0A0J9YY54 714 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 ESYT2A0FGR8 921 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 DENND3A2RUS2 1198 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 ISPDA4D126 451 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 MEI4A8MW99 385 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 FAM25EA8MYX2 175 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 PRR32B1ATL7 298 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 H3BNH8 94 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 TRIM77I1YAP6 450 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 PDXKO00764 312 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 DNALI1O14645 258 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 ACOT8O14734 319 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 MEIS2O14770 477 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 SYNGR3O43761 229 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 CELF2O95319 508 aaKnown RBP4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 PLEKHA8P1O95397 391 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 PTTG1O95997 202 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 SNRNP70P08621 437 aaKnown RBP4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 GZMAP12544 262 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 ACHEP22303 614 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 TCEA1P23193 301 aaKnown RBP4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 PTAFRP25105 342 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 RPA1P27694 616 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 HSPA1LP34931 641 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 NAMPTP43490 491 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 CCR10P46092 362 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 LIMK1P53667 647 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 NAPAP54920 295 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 TMBIM6P55061 237 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 SRP54P61011 504 aaKnown RBP4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 HNRNPKP61978 463 aaKnown RBP eCLIP4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 PITX1P78337 314 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 RPL24P83731 157 aaKnown RBP4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 ROR1Q01973 937 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 RBPJQ06330 500 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 RAD51Q06609 339 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 HSPA14Q0VDF9 509 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 OVGP1Q12889 678 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 PDIA2Q13087 525 aaKnown RBP4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 PRKAA1Q13131 559 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 OXA1LQ15070 435 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 MAPRE2Q15555 327 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 IZUMO4Q1ZYL8 232 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 STXBP5Q5T5C0 1151 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 ARHGEF16Q5VV41 709 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 TTC33Q6PID6 262 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 DCLRE1AQ6PJP8 1040 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 LINGO4Q6UY18 593 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 ZNF517Q6ZMY9 492 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 PLEKHG7Q6ZR37 379 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 KCTD8Q6ZWB6 473 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 TMPRSS11FQ6ZWK6 438 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 CYP4V2Q6ZWL3 525 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 COPS6Q7L5N1 327 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 DET1Q7L5Y6 550 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 PIWIL4Q7Z3Z4 852 aaKnown RBP4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 SLC51BQ86UW2 128 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 GPBP1Q86WP2 473 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 CDR2LQ86X02 465 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 FBXW8Q8N3Y1 598 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 ASCC1Q8N9N2 400 aaKnown RBP4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 TCP10LQ8TDR4 215 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 ADAMTS16Q8TE57 1224 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 GIMAP1Q8WWP7 306 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 C12orf43Q96C57 262 aaKnown RBP4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 SFXN2Q96NB2 322 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 LRRC3BQ96PB8 259 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 DOK1Q99704 481 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 UQCC2Q9BRT2 126 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 ANKRD60Q9BZ19 345 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 PSTPIP2Q9H939 334 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 OSER1Q9NX31 292 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 GDAP2Q9NXN4 497 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 HOXC10Q9NYD6 342 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 PKD2L2Q9NZM6 624 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 ZMAT5Q9UDW3 170 aaKnown RBP4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 PCSK1NQ9UHG2 260 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 ZNF221Q9UK13 617 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 NUP50Q9UKX7 468 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 POMPQ9Y244 141 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 TIMM22Q9Y584 194 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 CROCCQ5TZA2 2017 aa4.12□□□□□ -1.75
HMGB1P16-201ENST00000447155 GREB1LQ9C091 1923 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 IGKV2D-30A0A075B6S6 120 aa4.11□□□□□ -1.75
HMGB1P16-201ENST00000447155 A0A1W2PPQ1 181 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms