RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.52□□□□□ -0.57
UBR4-205ENST00000417040 CAMKVQ8NCB2 501 aa11.52□□□□□ -0.57
UBR4-205ENST00000417040 PAPD5Q8NDF8 572 aaKnown RBP11.52□□□□□ -0.57
UBR4-205ENST00000417040 FAM83FQ8NEG4 500 aaPredicted RBP11.52□□□□□ -0.57
UBR4-205ENST00000417040 OR51L1Q8NGJ5 315 aa11.52□□□□□ -0.57
UBR4-205ENST00000417040 RAD9AQ99638 391 aa11.52□□□□□ -0.57
UBR4-205ENST00000417040 EPYCQ99645 322 aa11.52□□□□□ -0.57
UBR4-205ENST00000417040 SSX3Q99909 188 aa11.52□□□□□ -0.57
UBR4-205ENST00000417040 MCCC2Q9HCC0 563 aa11.52□□□□□ -0.57
UBR4-205ENST00000417040 B4GALT6Q9UBX8 382 aa11.52□□□□□ -0.57
UBR4-205ENST00000417040 RPH3AQ9Y2J0 694 aaPredicted RBP11.52□□□□□ -0.57
UBR4-205ENST00000417040 KCNIP3Q9Y2W7 256 aa11.52□□□□□ -0.57
UBR4-205ENST00000417040 TRIM64A6NGJ6 449 aa11.52□□□□□ -0.57
UBR4-205ENST00000417040 MAFKO60675 156 aa11.52□□□□□ -0.57
UBR4-205ENST00000417040 DUSP11O75319 330 aaKnown RBP11.52□□□□□ -0.57
UBR4-205ENST00000417040 AMY2BP19961 511 aa11.52□□□□□ -0.57
UBR4-205ENST00000417040 IVDP26440 423 aa11.52□□□□□ -0.57
UBR4-205ENST00000417040 GLP1RP43220 463 aa11.52□□□□□ -0.57
UBR4-205ENST00000417040 LUMP51884 338 aaPredicted RBP11.52□□□□□ -0.57
UBR4-205ENST00000417040 ZNF252P-AS1Q0IIN9 211 aa11.52□□□□□ -0.57
UBR4-205ENST00000417040 NFATC4Q14934 902 aa11.52□□□□□ -0.57
UBR4-205ENST00000417040 GRIN2CQ14957 1233 aa11.52□□□□□ -0.57
UBR4-205ENST00000417040 FAM110CQ1W6H9 321 aa11.52□□□□□ -0.57
UBR4-205ENST00000417040 ZNF789Q5FWF6 425 aa11.52□□□□□ -0.57
UBR4-205ENST00000417040 ZC3H3Q8IXZ2 948 aaKnown RBP11.52□□□□□ -0.57
UBR4-205ENST00000417040 REM2Q8IYK8 340 aaPredicted RBP11.52□□□□□ -0.57
UBR4-205ENST00000417040 TEX19Q8NA77 164 aa11.52□□□□□ -0.57
UBR4-205ENST00000417040 AP1S3Q96PC3 154 aa11.52□□□□□ -0.57
UBR4-205ENST00000417040 IL12RB2Q99665 862 aa11.52□□□□□ -0.57
UBR4-205ENST00000417040 POPDC3Q9HBV1 291 aa11.52□□□□□ -0.57
UBR4-205ENST00000417040 EVA1BQ9NVM1 165 aa11.52□□□□□ -0.57
UBR4-205ENST00000417040 INTS6Q9UL03 887 aaKnown RBP11.52□□□□□ -0.57
UBR4-205ENST00000417040 GJB5O95377 273 aa11.51□□□□□ -0.57
UBR4-205ENST00000417040 PROZP22891 400 aa11.51□□□□□ -0.57
UBR4-205ENST00000417040 MECP2P51608 486 aaKnown RBP11.51□□□□□ -0.57
UBR4-205ENST00000417040 CAPZA1P52907 286 aa11.51□□□□□ -0.57
UBR4-205ENST00000417040 FIGNL1Q6PIW4 674 aa11.51□□□□□ -0.57
UBR4-205ENST00000417040 DNM1P34Q6PK57 102 aa11.51□□□□□ -0.57
UBR4-205ENST00000417040 PRSS48Q7RTY5 328 aa11.51□□□□□ -0.57
UBR4-205ENST00000417040 THAP3Q8WTV1 239 aaPredicted RBP11.51□□□□□ -0.57
UBR4-205ENST00000417040 OR6C2Q9NZP2 312 aa11.51□□□□□ -0.57
UBR4-205ENST00000417040 MT-ND4P03905 459 aa11.51□□□□□ -0.57
UBR4-205ENST00000417040 HAPLN1P10915 354 aaPredicted RBP11.51□□□□□ -0.57
UBR4-205ENST00000417040 HOXD8P13378 290 aaPredicted RBP11.51□□□□□ -0.57
UBR4-205ENST00000417040 MSX1P28360 303 aa11.51□□□□□ -0.57
UBR4-205ENST00000417040 POU6F2P78424 691 aaPredicted RBP11.51□□□□□ -0.57
UBR4-205ENST00000417040 CRYZQ08257 329 aaKnown RBP11.51□□□□□ -0.57
UBR4-205ENST00000417040 RIN1Q13671 783 aa11.51□□□□□ -0.57
UBR4-205ENST00000417040 ZNF674Q2M3X9 581 aa11.51□□□□□ -0.57
UBR4-205ENST00000417040 GPR157Q5UAW9 335 aa11.51□□□□□ -0.57
UBR4-205ENST00000417040 KCNJ9Q92806 393 aa11.51□□□□□ -0.57
UBR4-205ENST00000417040 ELMOD3Q96FG2 381 aa11.51□□□□□ -0.57
UBR4-205ENST00000417040 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.51□□□□□ -0.57
UBR4-205ENST00000417040 ELOVL2Q9NXB9 296 aa11.51□□□□□ -0.57
UBR4-205ENST00000417040 ATPIF1Q9UII2 106 aa11.51□□□□□ -0.57
UBR4-205ENST00000417040 CLEC4EQ9ULY5 219 aa11.51□□□□□ -0.57
UBR4-205ENST00000417040 H7C417 338 aa11.51□□□□□ -0.57
UBR4-205ENST00000417040 GNSP15586 552 aa11.51□□□□□ -0.57
UBR4-205ENST00000417040 RHCEP18577 417 aa11.51□□□□□ -0.57
UBR4-205ENST00000417040 RAB3BP20337 219 aa11.51□□□□□ -0.57
UBR4-205ENST00000417040 SCNN1AP37088 669 aa11.51□□□□□ -0.57
UBR4-205ENST00000417040 MFSD13AQ14CX5 517 aa11.51□□□□□ -0.57
UBR4-205ENST00000417040 C1orf220Q5T0J3 134 aa11.51□□□□□ -0.57
UBR4-205ENST00000417040 SPARTQ8N0X7 666 aa11.51□□□□□ -0.57
UBR4-205ENST00000417040 BBS10Q8TAM1 723 aa11.51□□□□□ -0.57
UBR4-205ENST00000417040 SNAPC3Q92966 411 aa11.51□□□□□ -0.57
UBR4-205ENST00000417040 MAGIXQ9H6Y5 334 aa11.51□□□□□ -0.57
UBR4-205ENST00000417040 TEX10Q9NXF1 929 aaPredicted RBP11.51□□□□□ -0.57
UBR4-205ENST00000417040 RETP07949 1114 aa11.51□□□□□ -0.57
UBR4-205ENST00000417040 H2BFMP0C1H6 154 aa11.51□□□□□ -0.57
UBR4-205ENST00000417040 BMP2P12643 396 aa11.51□□□□□ -0.57
UBR4-205ENST00000417040 GM2AP17900 193 aa11.51□□□□□ -0.57
UBR4-205ENST00000417040 FRKP42685 505 aaPredicted RBP11.51□□□□□ -0.57
UBR4-205ENST00000417040 CAMLGP49069 296 aa11.51□□□□□ -0.57
UBR4-205ENST00000417040 LIPJQ5W064 366 aa11.51□□□□□ -0.57
UBR4-205ENST00000417040 C22orf39Q6P5X5 142 aa11.51□□□□□ -0.57
UBR4-205ENST00000417040 BEST4Q8NFU0 473 aa11.51□□□□□ -0.57
UBR4-205ENST00000417040 OR52P1PQ8NH57 321 aa11.51□□□□□ -0.57
UBR4-205ENST00000417040 C2orf15Q8WU43 125 aaKnown RBP11.51□□□□□ -0.57
UBR4-205ENST00000417040 SMPDL3AQ92484 453 aa11.51□□□□□ -0.57
UBR4-205ENST00000417040 GTF2H4Q92759 462 aa11.51□□□□□ -0.57
UBR4-205ENST00000417040 ACDQ96AP0 544 aa11.51□□□□□ -0.57
UBR4-205ENST00000417040 BOCQ9BWV1 1114 aa11.51□□□□□ -0.57
UBR4-205ENST00000417040 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.51□□□□□ -0.57
UBR4-205ENST00000417040 RBPJLQ9UBG7 517 aa11.51□□□□□ -0.57
UBR4-205ENST00000417040 CAV3P56539 151 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 CMPK2Q5EBM0 449 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 METTL2BQ6P1Q9 378 aaKnown RBP11.5□□□□□ -0.57
UBR4-205ENST00000417040 Q6ZVL8 140 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 RASGRP3Q8IV61 690 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 NAGSQ8N159 534 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 OR4K13Q8NH42 304 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 FUBP3Q96I24 572 aaKnown RBP eCLIP11.5□□□□□ -0.57
UBR4-205ENST00000417040 SORT1Q99523 831 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 NMNAT1Q9HAN9 279 aaPredicted RBP11.5□□□□□ -0.57
UBR4-205ENST00000417040 BRF2Q9HAW0 419 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 RPS10P5Q9NQ39 176 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 SDHAF3Q9NRP4 125 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 EPHA6Q9UF33 1036 aa11.5□□□□□ -0.57
UBR4-205ENST00000417040 PCDHGA8Q9Y5G5 932 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms