RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 CCNYL1Q8N7R7 359 aa16.34■□□□□ 0.21
LSM5-204ENST00000409909 ZNF615Q8N8J6 731 aa16.34■□□□□ 0.21
LSM5-204ENST00000409909 ZNF441Q8N8Z8 693 aa16.34■□□□□ 0.21
LSM5-204ENST00000409909 AGAP11Q8TF27 550 aa16.34■□□□□ 0.21
LSM5-204ENST00000409909 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.34■□□□□ 0.21
LSM5-204ENST00000409909 GAL3ST4Q96RP7 486 aa16.34■□□□□ 0.21
LSM5-204ENST00000409909 FAM173AQ9BQD7 235 aa16.34■□□□□ 0.21
LSM5-204ENST00000409909 TTTY12Q9BZ98 90 aa16.34■□□□□ 0.21
LSM5-204ENST00000409909 ACPTQ9BZG2 426 aa16.34■□□□□ 0.21
LSM5-204ENST00000409909 DEFB127Q9H1M4 99 aa16.34■□□□□ 0.21
LSM5-204ENST00000409909 SACM1LQ9NTJ5 587 aa16.34■□□□□ 0.21
LSM5-204ENST00000409909 MEMO1Q9Y316 297 aa16.34■□□□□ 0.21
LSM5-204ENST00000409909 TIMM22Q9Y584 194 aa16.34■□□□□ 0.21
LSM5-204ENST00000409909 HRH3Q9Y5N1 445 aa16.34■□□□□ 0.21
LSM5-204ENST00000409909 DNAJC13O75165 2243 aa16.34■□□□□ 0.21
LSM5-204ENST00000409909 DCHS2Q6V1P9 2916 aa16.33■□□□□ 0.21
LSM5-204ENST00000409909 C1orf226A1L170 272 aa16.33■□□□□ 0.2
LSM5-204ENST00000409909 FAM166BA8MTA8 275 aa16.33■□□□□ 0.2
LSM5-204ENST00000409909 PLIN3O60664 434 aa16.33■□□□□ 0.2
LSM5-204ENST00000409909 GUCY1B2O75343 617 aa16.33■□□□□ 0.2
LSM5-204ENST00000409909 ESRRBO95718 433 aa16.33■□□□□ 0.2
LSM5-204ENST00000409909 ENO1P06733 434 aaKnown RBP16.33■□□□□ 0.2
LSM5-204ENST00000409909 MYL2P10916 166 aa16.33■□□□□ 0.2
LSM5-204ENST00000409909 ESRRAP11474 423 aaPredicted RBP16.33■□□□□ 0.2
LSM5-204ENST00000409909 PORP16435 677 aaPredicted RBP16.33■□□□□ 0.2
LSM5-204ENST00000409909 KRT15P19012 456 aa16.33■□□□□ 0.2
LSM5-204ENST00000409909 S1PR1P21453 382 aa16.33■□□□□ 0.2
LSM5-204ENST00000409909 HMOX2P30519 316 aa16.33■□□□□ 0.2
LSM5-204ENST00000409909 CRHR1P34998 444 aa16.33■□□□□ 0.2
LSM5-204ENST00000409909 PIGAP37287 484 aa16.33■□□□□ 0.2
LSM5-204ENST00000409909 DNASE1L1P49184 302 aa16.33■□□□□ 0.2
LSM5-204ENST00000409909 FOXA1P55317 472 aa16.33■□□□□ 0.2
LSM5-204ENST00000409909 DUSP2Q05923 314 aa16.33■□□□□ 0.2
LSM5-204ENST00000409909 MGAT2Q10469 447 aa16.33■□□□□ 0.2
LSM5-204ENST00000409909 FOXO1Q12778 655 aa16.33■□□□□ 0.2
LSM5-204ENST00000409909 C3P1Q6ZMU1 363 aa16.33■□□□□ 0.2
LSM5-204ENST00000409909 GALNT12Q8IXK2 581 aa16.33■□□□□ 0.2
LSM5-204ENST00000409909 SLC22A8Q8TCC7 542 aa16.33■□□□□ 0.2
LSM5-204ENST00000409909 SPACA9Q96E40 222 aaPredicted RBP16.33■□□□□ 0.2
LSM5-204ENST00000409909 ZDHHC11Q9H8X9 412 aa16.33■□□□□ 0.2
LSM5-204ENST00000409909 PPCSQ9HAB8 311 aa16.33■□□□□ 0.2
LSM5-204ENST00000409909 HEY2Q9UBP5 337 aa16.33■□□□□ 0.2
LSM5-204ENST00000409909 STK38LQ9Y2H1 464 aa16.33■□□□□ 0.2
LSM5-204ENST00000409909 C2orf92A0A1B0GVN3 265 aa16.32■□□□□ 0.2
LSM5-204ENST00000409909 P04436 131 aa16.32■□□□□ 0.2
LSM5-204ENST00000409909 FBXO45P0C2W1 286 aa16.32■□□□□ 0.2
LSM5-204ENST00000409909 NT5EP21589 574 aa16.32■□□□□ 0.2
LSM5-204ENST00000409909 PTGS2P35354 604 aa16.32■□□□□ 0.2
LSM5-204ENST00000409909 SOX18P35713 384 aa16.32■□□□□ 0.2
LSM5-204ENST00000409909 FEN1P39748 380 aaKnown RBP16.32■□□□□ 0.2
LSM5-204ENST00000409909 CCT5P48643 541 aa16.32■□□□□ 0.2
LSM5-204ENST00000409909 NAGLUP54802 743 aa16.32■□□□□ 0.2
LSM5-204ENST00000409909 VSNL1P62760 191 aa16.32■□□□□ 0.2
LSM5-204ENST00000409909 TRA2BP62995 288 aaKnown RBP16.32■□□□□ 0.2
LSM5-204ENST00000409909 HMGCS1Q01581 520 aa16.32■□□□□ 0.2
LSM5-204ENST00000409909 PLGLB1Q02325 96 aa16.32■□□□□ 0.2
LSM5-204ENST00000409909 SLC22A10Q63ZE4 541 aa16.32■□□□□ 0.2
LSM5-204ENST00000409909 FAM180BQ6P0A1 224 aa16.32■□□□□ 0.2
LSM5-204ENST00000409909 SCIMPQ6UWF3 145 aa16.32■□□□□ 0.2
LSM5-204ENST00000409909 RPTNQ6XPR3 784 aa16.32■□□□□ 0.2
LSM5-204ENST00000409909 TMEM64Q6YI46 380 aa16.32■□□□□ 0.2
LSM5-204ENST00000409909 GK5Q6ZS86 529 aa16.32■□□□□ 0.2
LSM5-204ENST00000409909 FAM47EQ6ZV65 393 aa16.32■□□□□ 0.2
LSM5-204ENST00000409909 ZNF808Q8N4W9 903 aaPredicted RBP16.32■□□□□ 0.2
LSM5-204ENST00000409909 GBP7Q8N8V2 638 aaPredicted RBP16.32■□□□□ 0.2
LSM5-204ENST00000409909 OR2W6PQ8NHA6 318 aa16.32■□□□□ 0.2
LSM5-204ENST00000409909 FAM57AQ8TBR7 257 aa16.32■□□□□ 0.2
LSM5-204ENST00000409909 PAQR8Q8TEZ7 354 aa16.32■□□□□ 0.2
LSM5-204ENST00000409909 CCDC126Q96EE4 140 aa16.32■□□□□ 0.2
LSM5-204ENST00000409909 C11orf24Q96F05 449 aaPredicted RBP16.32■□□□□ 0.2
LSM5-204ENST00000409909 APIPQ96GX9 242 aa16.32■□□□□ 0.2
LSM5-204ENST00000409909 OR10A5Q9H207 317 aa16.32■□□□□ 0.2
LSM5-204ENST00000409909 PROK2Q9HC23 129 aa16.32■□□□□ 0.2
LSM5-204ENST00000409909 MID1IP1Q9NPA3 183 aa16.32■□□□□ 0.2
LSM5-204ENST00000409909 TUBA8Q9NY65 449 aaPredicted RBP16.32■□□□□ 0.2
LSM5-204ENST00000409909 MCM8Q9UJA3 840 aa16.32■□□□□ 0.2
LSM5-204ENST00000409909 GRID1Q9ULK0 1009 aa16.32■□□□□ 0.2
LSM5-204ENST00000409909 APCP25054 2843 aa16.31■□□□□ 0.2
LSM5-204ENST00000409909 PRSS44E7EML9 344 aa16.31■□□□□ 0.2
LSM5-204ENST00000409909 PRRG2O14669 202 aa16.31■□□□□ 0.2
LSM5-204ENST00000409909 ERAL1O75616 437 aaKnown RBP16.31■□□□□ 0.2
LSM5-204ENST00000409909 KRT4P19013 534 aa16.31■□□□□ 0.2
LSM5-204ENST00000409909 GRNP28799 593 aaKnown RBP16.31■□□□□ 0.2
LSM5-204ENST00000409909 DEKP35659 375 aaKnown RBP16.31■□□□□ 0.2
LSM5-204ENST00000409909 DNAJB13P59910 316 aa16.31■□□□□ 0.2
LSM5-204ENST00000409909 SLC18A2Q05940 514 aa16.31■□□□□ 0.2
LSM5-204ENST00000409909 ART3Q13508 389 aa16.31■□□□□ 0.2
LSM5-204ENST00000409909 CDSNQ15517 529 aa16.31■□□□□ 0.2
LSM5-204ENST00000409909 PRICKLE4Q2TBC4 344 aa16.31■□□□□ 0.2
LSM5-204ENST00000409909 CCDC153Q494R4 210 aa16.31■□□□□ 0.2
LSM5-204ENST00000409909 SP5Q6BEB4 398 aaPredicted RBP16.31■□□□□ 0.2
LSM5-204ENST00000409909 FAM111BQ6SJ93 734 aa16.31■□□□□ 0.2
LSM5-204ENST00000409909 RGS9BPQ6ZS82 235 aa16.31■□□□□ 0.2
LSM5-204ENST00000409909 FRMD7Q6ZUT3 714 aa16.31■□□□□ 0.2
LSM5-204ENST00000409909 SLC22A16Q86VW1 577 aa16.31■□□□□ 0.2
LSM5-204ENST00000409909 C4orf33Q8N1A6 199 aa16.31■□□□□ 0.2
LSM5-204ENST00000409909 TMEM251Q8N6I4 163 aa16.31■□□□□ 0.2
LSM5-204ENST00000409909 SIMC1Q8NDZ2 872 aa16.31■□□□□ 0.2
LSM5-204ENST00000409909 OR10G3Q8NGC4 313 aa16.31■□□□□ 0.2
LSM5-204ENST00000409909 ADIPOR1Q96A54 375 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms