RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 ANHXE9PGG2 379 aa14.36□□□□□ -0.11
SCAMP4-202ENST00000409472 BTN3A3O00478 584 aa14.36□□□□□ -0.11
SCAMP4-202ENST00000409472 TBX19O60806 448 aa14.36□□□□□ -0.11
SCAMP4-202ENST00000409472 ADAM15Q13444 863 aa14.36□□□□□ -0.11
SCAMP4-202ENST00000409472 HTR4Q13639 388 aa14.36□□□□□ -0.11
SCAMP4-202ENST00000409472 TMEM236Q5W0B7 351 aa14.36□□□□□ -0.11
SCAMP4-202ENST00000409472 VANGL1Q8TAA9 524 aaPredicted RBP14.36□□□□□ -0.11
SCAMP4-202ENST00000409472 AMDHD1Q96NU7 426 aa14.36□□□□□ -0.11
SCAMP4-202ENST00000409472 OR2M4Q96R27 311 aa14.36□□□□□ -0.11
SCAMP4-202ENST00000409472 PIP5K1AQ99755 562 aa14.36□□□□□ -0.11
SCAMP4-202ENST00000409472 NEUROD4Q9HD90 331 aa14.36□□□□□ -0.11
SCAMP4-202ENST00000409472 A4GALTQ9NPC4 353 aa14.36□□□□□ -0.11
SCAMP4-202ENST00000409472 APOBEC3BQ9UH17 382 aaKnown RBP14.36□□□□□ -0.11
SCAMP4-202ENST00000409472 MSRAQ9UJ68 235 aa14.36□□□□□ -0.11
SCAMP4-202ENST00000409472 FBXW2Q9UKT8 454 aa14.36□□□□□ -0.11
SCAMP4-202ENST00000409472 AP1M2Q9Y6Q5 423 aa14.36□□□□□ -0.11
SCAMP4-202ENST00000409472 ZNF99A8MXY4 864 aaPredicted RBP14.36□□□□□ -0.11
SCAMP4-202ENST00000409472 NDUFS2O75306 463 aa14.36□□□□□ -0.11
SCAMP4-202ENST00000409472 BCAS1O75363 584 aaPredicted RBP14.36□□□□□ -0.11
SCAMP4-202ENST00000409472 ERAL1O75616 437 aaKnown RBP14.36□□□□□ -0.11
SCAMP4-202ENST00000409472 OR12D1P0DN82 309 aa14.36□□□□□ -0.11
SCAMP4-202ENST00000409472 IDH2P48735 452 aaKnown RBP14.36□□□□□ -0.11
SCAMP4-202ENST00000409472 CCT3P49368 545 aaKnown RBP14.36□□□□□ -0.11
SCAMP4-202ENST00000409472 SELENBP1Q13228 472 aa14.36□□□□□ -0.11
SCAMP4-202ENST00000409472 SLAMF1Q13291 335 aa14.36□□□□□ -0.11
SCAMP4-202ENST00000409472 TUBA3CQ13748 450 aa14.36□□□□□ -0.11
SCAMP4-202ENST00000409472 LRRC32Q14392 662 aa14.36□□□□□ -0.11
SCAMP4-202ENST00000409472 CTF1Q16619 201 aa14.36□□□□□ -0.11
SCAMP4-202ENST00000409472 TOR1AIP1Q5JTV8 583 aa14.36□□□□□ -0.11
SCAMP4-202ENST00000409472 ARMC8Q8IUR7 673 aa14.36□□□□□ -0.11
SCAMP4-202ENST00000409472 SFTPA2Q8IWL1 248 aa14.36□□□□□ -0.11
SCAMP4-202ENST00000409472 RAB42Q8N4Z0 105 aa14.36□□□□□ -0.11
SCAMP4-202ENST00000409472 FRMD1Q8N878 549 aa14.36□□□□□ -0.11
SCAMP4-202ENST00000409472 RAB2BQ8WUD1 216 aa14.36□□□□□ -0.11
SCAMP4-202ENST00000409472 KCNK12Q9HB15 430 aa14.36□□□□□ -0.11
SCAMP4-202ENST00000409472 PRDM7Q9NQW5 492 aa14.36□□□□□ -0.11
SCAMP4-202ENST00000409472 CRNNQ9UBG3 495 aaPredicted RBP14.36□□□□□ -0.11
SCAMP4-202ENST00000409472 ENPP4Q9Y6X5 453 aa14.36□□□□□ -0.11
SCAMP4-202ENST00000409472 SCN2AQ99250 2005 aa14.35□□□□□ -0.11
SCAMP4-202ENST00000409472 SH3BP5O60239 455 aa14.35□□□□□ -0.11
SCAMP4-202ENST00000409472 MFN2O95140 757 aa14.35□□□□□ -0.11
SCAMP4-202ENST00000409472 LCKP06239 509 aa14.35□□□□□ -0.11
SCAMP4-202ENST00000409472 TGFBR1P36897 503 aa14.35□□□□□ -0.11
SCAMP4-202ENST00000409472 NCBP2P52298 156 aaKnown RBP eCLIP14.35□□□□□ -0.11
SCAMP4-202ENST00000409472 LSM3P62310 102 aaKnown RBP14.35□□□□□ -0.11
SCAMP4-202ENST00000409472 TUBA1BP68363 451 aa14.35□□□□□ -0.11
SCAMP4-202ENST00000409472 LEXMQ3ZCV2 418 aa14.35□□□□□ -0.11
SCAMP4-202ENST00000409472 ENPP7Q6UWV6 458 aa14.35□□□□□ -0.11
SCAMP4-202ENST00000409472 TMEM92Q6UXU6 159 aa14.35□□□□□ -0.11
SCAMP4-202ENST00000409472 TUBA1AQ71U36 451 aa14.35□□□□□ -0.11
SCAMP4-202ENST00000409472 ANKRD13BQ86YJ7 626 aa14.35□□□□□ -0.11
SCAMP4-202ENST00000409472 ACOT4Q8N9L9 421 aa14.35□□□□□ -0.11
SCAMP4-202ENST00000409472 SUN3Q8TAQ9 357 aa14.35□□□□□ -0.11
SCAMP4-202ENST00000409472 CAPSLQ8WWF8 208 aa14.35□□□□□ -0.11
SCAMP4-202ENST00000409472 PROX1Q92786 737 aa14.35□□□□□ -0.11
SCAMP4-202ENST00000409472 CNRIP1Q96F85 164 aaPredicted RBP14.35□□□□□ -0.11
SCAMP4-202ENST00000409472 ZBED6CLQ96FA7 236 aaPredicted RBP14.35□□□□□ -0.11
SCAMP4-202ENST00000409472 SIPA1Q96FS4 1042 aa14.35□□□□□ -0.11
SCAMP4-202ENST00000409472 MRGPRX1Q96LB2 322 aa14.35□□□□□ -0.11
SCAMP4-202ENST00000409472 OR51I1Q9H343 314 aa14.35□□□□□ -0.11
SCAMP4-202ENST00000409472 CLDND1Q9NY35 253 aa14.35□□□□□ -0.11
SCAMP4-202ENST00000409472 ZNF624Q9P2J8 865 aaPredicted RBP14.35□□□□□ -0.11
SCAMP4-202ENST00000409472 ENPP5Q9UJA9 477 aa14.35□□□□□ -0.11
SCAMP4-202ENST00000409472 ASB4Q9Y574 426 aa14.35□□□□□ -0.11
SCAMP4-202ENST00000409472 N6AMT1Q9Y5N5 214 aa14.35□□□□□ -0.11
SCAMP4-202ENST00000409472 HSPE1-MOB4S4R3N1 261 aa14.35□□□□□ -0.11
SCAMP4-202ENST00000409472 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.34□□□□□ -0.11
SCAMP4-202ENST00000409472 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.34□□□□□ -0.11
SCAMP4-202ENST00000409472 C5orf58C9J3I9 102 aa14.34□□□□□ -0.11
SCAMP4-202ENST00000409472 MAN2B1O00754 1011 aa14.34□□□□□ -0.11
SCAMP4-202ENST00000409472 GUCY1B2O75343 617 aa14.34□□□□□ -0.11
SCAMP4-202ENST00000409472 GADD45GO95257 159 aa14.34□□□□□ -0.11
SCAMP4-202ENST00000409472 AIFM1O95831 613 aa14.34□□□□□ -0.11
SCAMP4-202ENST00000409472 IFNW1P05000 195 aa14.34□□□□□ -0.11
SCAMP4-202ENST00000409472 HIST1H1TP22492 207 aaPredicted RBP14.34□□□□□ -0.11
SCAMP4-202ENST00000409472 C21orf33P30042 268 aaPredicted RBP14.34□□□□□ -0.11
SCAMP4-202ENST00000409472 SERPINB1P30740 379 aa14.34□□□□□ -0.11
SCAMP4-202ENST00000409472 GGT2P36268 569 aa14.34□□□□□ -0.11
SCAMP4-202ENST00000409472 LTBRP36941 435 aa14.34□□□□□ -0.11
SCAMP4-202ENST00000409472 FUT5Q11128 374 aa14.34□□□□□ -0.11
SCAMP4-202ENST00000409472 SEC23BQ15437 767 aa14.34□□□□□ -0.11
SCAMP4-202ENST00000409472 PROX2Q3B8N5 592 aa14.34□□□□□ -0.11
SCAMP4-202ENST00000409472 ADPRMQ3LIE5 342 aa14.34□□□□□ -0.11
SCAMP4-202ENST00000409472 ABHD17CQ6PCB6 329 aa14.34□□□□□ -0.11
SCAMP4-202ENST00000409472 KIAA1324Q6UXG2 1013 aaKnown RBP14.34□□□□□ -0.11
SCAMP4-202ENST00000409472 USP43Q70EL4 1123 aa14.34□□□□□ -0.11
SCAMP4-202ENST00000409472 AQP11Q8NBQ7 271 aa14.34□□□□□ -0.11
SCAMP4-202ENST00000409472 KCT2Q8NC54 265 aa14.34□□□□□ -0.11
SCAMP4-202ENST00000409472 SUN5Q8TC36 379 aa14.34□□□□□ -0.11
SCAMP4-202ENST00000409472 SCARF2Q96GP6 870 aaPredicted RBP14.34□□□□□ -0.11
SCAMP4-202ENST00000409472 QRFPRQ96P65 431 aa14.34□□□□□ -0.11
SCAMP4-202ENST00000409472 SIGLEC11Q96RL6 698 aa14.34□□□□□ -0.11
SCAMP4-202ENST00000409472 TMEM168Q9H0V1 697 aa14.34□□□□□ -0.11
SCAMP4-202ENST00000409472 ZCCHC3Q9NUD5 404 aaKnown RBP14.34□□□□□ -0.11
SCAMP4-202ENST00000409472 ZNF226Q9NYT6 803 aa14.34□□□□□ -0.11
SCAMP4-202ENST00000409472 ISM1B1AKI9 464 aa14.34□□□□□ -0.11
SCAMP4-202ENST00000409472 IGFBP1P08833 259 aaPredicted RBP14.34□□□□□ -0.11
SCAMP4-202ENST00000409472 NDUFV2P19404 249 aa14.34□□□□□ -0.11
SCAMP4-202ENST00000409472 ACVR2AP27037 513 aa14.34□□□□□ -0.11
SCAMP4-202ENST00000409472 PSMB9P28065 219 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms