RNA–Protein interactions for RNA: ENST00000379792.6

HERPUD1-203, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5 BASIC

Gene HERPUD1, Length 1,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-203ENST00000379792 AMER2Q8N7J2 671 aa13.2□□□□□ -0.3
HERPUD1-203ENST00000379792 ENDOVQ8N8Q3 282 aaKnown RBP13.2□□□□□ -0.3
HERPUD1-203ENST00000379792 SIMC1Q8NDZ2 872 aa13.2□□□□□ -0.3
HERPUD1-203ENST00000379792 NLGN4YQ8NFZ3 816 aaPredicted RBP13.2□□□□□ -0.3
HERPUD1-203ENST00000379792 PNPT1Q8TCS8 783 aaKnown RBP13.2□□□□□ -0.3
HERPUD1-203ENST00000379792 ROPN1LQ96C74 230 aa13.2□□□□□ -0.3
HERPUD1-203ENST00000379792 RBM18Q96H35 190 aaKnown RBP13.2□□□□□ -0.3
HERPUD1-203ENST00000379792 DGAT2Q96PD7 388 aa13.2□□□□□ -0.3
HERPUD1-203ENST00000379792 CRB3Q9BUF7 120 aa13.2□□□□□ -0.3
HERPUD1-203ENST00000379792 WDR70Q9NW82 654 aa13.2□□□□□ -0.3
HERPUD1-203ENST00000379792 PACSIN3Q9UKS6 424 aa13.2□□□□□ -0.3
HERPUD1-203ENST00000379792 VPS4AQ9UN37 437 aa13.2□□□□□ -0.3
HERPUD1-203ENST00000379792 PCDHGA7Q9Y5G6 932 aa13.2□□□□□ -0.3
HERPUD1-203ENST00000379792 SDK2Q58EX2 2172 aa13.2□□□□□ -0.3
HERPUD1-203ENST00000379792 NUP214P35658 2090 aaPredicted RBP13.2□□□□□ -0.3
HERPUD1-203ENST00000379792 STMND1H3BQB6 276 aa13.2□□□□□ -0.3
HERPUD1-203ENST00000379792 BRINP1O60477 761 aa13.2□□□□□ -0.3
HERPUD1-203ENST00000379792 KLF7O75840 302 aaPredicted RBP13.2□□□□□ -0.3
HERPUD1-203ENST00000379792 CT62P0C5K7 136 aa13.2□□□□□ -0.3
HERPUD1-203ENST00000379792 TNNI3P19429 210 aa13.2□□□□□ -0.3
HERPUD1-203ENST00000379792 PTPN4P29074 926 aa13.2□□□□□ -0.3
HERPUD1-203ENST00000379792 SOX18P35713 384 aa13.2□□□□□ -0.3
HERPUD1-203ENST00000379792 MC3RP41968 323 aa13.2□□□□□ -0.3
HERPUD1-203ENST00000379792 SELPLGQ14242 412 aa13.2□□□□□ -0.3
HERPUD1-203ENST00000379792 MLC1Q15049 377 aa13.2□□□□□ -0.3
HERPUD1-203ENST00000379792 TRMT12Q53H54 448 aaKnown RBP13.2□□□□□ -0.3
HERPUD1-203ENST00000379792 NANOGP8Q6NSW7 305 aa13.2□□□□□ -0.3
HERPUD1-203ENST00000379792 SZRD1Q7Z422 152 aa13.2□□□□□ -0.3
HERPUD1-203ENST00000379792 YTHDF3Q7Z739 585 aaKnown RBP13.2□□□□□ -0.3
HERPUD1-203ENST00000379792 ESX1Q8N693 406 aa13.2□□□□□ -0.3
HERPUD1-203ENST00000379792 PLPP5Q8NEB5 264 aa13.2□□□□□ -0.3
HERPUD1-203ENST00000379792 GOT1L1Q8NHS2 421 aaPredicted RBP13.2□□□□□ -0.3
HERPUD1-203ENST00000379792 SLC35A5Q9BS91 424 aa13.2□□□□□ -0.3
HERPUD1-203ENST00000379792 BTBD10Q9BSF8 475 aa13.2□□□□□ -0.3
HERPUD1-203ENST00000379792 B3GNT4Q9C0J1 378 aa13.2□□□□□ -0.3
HERPUD1-203ENST00000379792 IKZF5Q9H5V7 419 aa13.2□□□□□ -0.3
HERPUD1-203ENST00000379792 WDR54Q9H977 334 aa13.2□□□□□ -0.3
HERPUD1-203ENST00000379792 NANOGQ9H9S0 305 aa13.2□□□□□ -0.3
HERPUD1-203ENST00000379792 TRBV5-3A0A0A0MS03 114 aa13.19□□□□□ -0.3
HERPUD1-203ENST00000379792 IGHV3-20A0A0C4DH32 117 aa13.19□□□□□ -0.3
HERPUD1-203ENST00000379792 C1QTNF9BB2RNN3 333 aa13.19□□□□□ -0.3
HERPUD1-203ENST00000379792 HRKO00198 91 aa13.19□□□□□ -0.3
HERPUD1-203ENST00000379792 ALOX12BO75342 701 aa13.19□□□□□ -0.3
HERPUD1-203ENST00000379792 ATP1B1P05026 303 aa13.19□□□□□ -0.3
HERPUD1-203ENST00000379792 C1QTNF9P0C862 333 aa13.19□□□□□ -0.3
HERPUD1-203ENST00000379792 STT3AP46977 705 aa13.19□□□□□ -0.3
HERPUD1-203ENST00000379792 CCT3P49368 545 aaKnown RBP13.19□□□□□ -0.3
HERPUD1-203ENST00000379792 PRKAG1P54619 331 aa13.19□□□□□ -0.3
HERPUD1-203ENST00000379792 MTPNP58546 118 aa13.19□□□□□ -0.3
HERPUD1-203ENST00000379792 LRRC74AQ0VAA2 488 aa13.19□□□□□ -0.3
HERPUD1-203ENST00000379792 MGAT2Q10469 447 aa13.19□□□□□ -0.3
HERPUD1-203ENST00000379792 SERTAD2Q14140 314 aa13.19□□□□□ -0.3
HERPUD1-203ENST00000379792 TGIF1Q15583 401 aa13.19□□□□□ -0.3
HERPUD1-203ENST00000379792 HACD2Q6Y1H2 254 aa13.19□□□□□ -0.3
HERPUD1-203ENST00000379792 ST13P4Q8IZP2 240 aaPredicted RBP13.19□□□□□ -0.3
HERPUD1-203ENST00000379792 KDF1Q8NAX2 398 aaPredicted RBP13.19□□□□□ -0.3
HERPUD1-203ENST00000379792 OR7G2Q8NG99 324 aa13.19□□□□□ -0.3
HERPUD1-203ENST00000379792 RIT1Q92963 219 aa13.19□□□□□ -0.3
HERPUD1-203ENST00000379792 ELP4Q96EB1 424 aa13.19□□□□□ -0.3
HERPUD1-203ENST00000379792 GPATCH1Q9BRR8 931 aaKnown RBP13.19□□□□□ -0.3
HERPUD1-203ENST00000379792 NRSN2Q9GZP1 204 aa13.19□□□□□ -0.3
HERPUD1-203ENST00000379792 CXorf21Q9HAI6 301 aa13.19□□□□□ -0.3
HERPUD1-203ENST00000379792 GMPR2Q9P2T1 348 aaKnown RBP13.19□□□□□ -0.3
HERPUD1-203ENST00000379792 LOC101059948A0A1B0GTJ6 334 aa13.18□□□□□ -0.3
HERPUD1-203ENST00000379792 TCRBV16S1A1N1A0A5B0 115 aa13.18□□□□□ -0.3
HERPUD1-203ENST00000379792 CLIC1O00299 241 aa13.18□□□□□ -0.3
HERPUD1-203ENST00000379792 HNRNPCL1O60812 293 aaKnown RBP13.18□□□□□ -0.3
HERPUD1-203ENST00000379792 UMODP07911 640 aa13.18□□□□□ -0.3
HERPUD1-203ENST00000379792 F8A1P23610 371 aa13.18□□□□□ -0.3
HERPUD1-203ENST00000379792 SLC6A2P23975 617 aa13.18□□□□□ -0.3
HERPUD1-203ENST00000379792 CHI3L1P36222 383 aaPredicted RBP13.18□□□□□ -0.3
HERPUD1-203ENST00000379792 STAT5AP42229 794 aa13.18□□□□□ -0.3
HERPUD1-203ENST00000379792 RASSF2P50749 326 aa13.18□□□□□ -0.3
HERPUD1-203ENST00000379792 PGDP52209 483 aa13.18□□□□□ -0.3
HERPUD1-203ENST00000379792 SLC7A2P52569 658 aa13.18□□□□□ -0.3
HERPUD1-203ENST00000379792 ZNF267Q14586 743 aaPredicted RBP13.18□□□□□ -0.3
HERPUD1-203ENST00000379792 RTP5Q14D33 572 aa13.18□□□□□ -0.3
HERPUD1-203ENST00000379792 EXOSC7Q15024 291 aaKnown RBP13.18□□□□□ -0.3
HERPUD1-203ENST00000379792 PRICKLE4Q2TBC4 344 aa13.18□□□□□ -0.3
HERPUD1-203ENST00000379792 RUNDC3AQ59EK9 446 aa13.18□□□□□ -0.3
HERPUD1-203ENST00000379792 ZNF628Q5EBL2 1059 aa13.18□□□□□ -0.3
HERPUD1-203ENST00000379792 CPZQ66K79 652 aa13.18□□□□□ -0.3
HERPUD1-203ENST00000379792 C8orf82Q6P1X6 216 aaPredicted RBP13.18□□□□□ -0.3
HERPUD1-203ENST00000379792 C16orf89Q6UX73 402 aa13.18□□□□□ -0.3
HERPUD1-203ENST00000379792 ANKRD37Q7Z713 158 aa13.18□□□□□ -0.3
HERPUD1-203ENST00000379792 PGAM4Q8N0Y7 254 aa13.18□□□□□ -0.3
HERPUD1-203ENST00000379792 RNF148Q8N7C7 305 aa13.18□□□□□ -0.3
HERPUD1-203ENST00000379792 PSMA8Q8TAA3 256 aa13.18□□□□□ -0.3
HERPUD1-203ENST00000379792 NKD1Q969G9 470 aa13.18□□□□□ -0.3
HERPUD1-203ENST00000379792 C8orf44Q96CB5 159 aa13.18□□□□□ -0.3
HERPUD1-203ENST00000379792 FAM120BQ96EK7 910 aaKnown RBP13.18□□□□□ -0.3
HERPUD1-203ENST00000379792 CLPTM1LQ96KA5 538 aa13.18□□□□□ -0.3
HERPUD1-203ENST00000379792 ANKRD27Q96NW4 1050 aa13.18□□□□□ -0.3
HERPUD1-203ENST00000379792 PHF12Q96QT6 1004 aa13.18□□□□□ -0.3
HERPUD1-203ENST00000379792 CDRT15Q96T59 188 aa13.18□□□□□ -0.3
HERPUD1-203ENST00000379792 THUMPD3Q9BV44 507 aaKnown RBP13.18□□□□□ -0.3
HERPUD1-203ENST00000379792 CADM1Q9BY67 442 aaKnown RBP13.18□□□□□ -0.3
HERPUD1-203ENST00000379792 PIF1Q9H611 641 aa13.18□□□□□ -0.3
HERPUD1-203ENST00000379792 NEUROD4Q9HD90 331 aa13.18□□□□□ -0.3
HERPUD1-203ENST00000379792 SEMA3GQ9NS98 782 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms