RNA–Protein interactions for RNA: ENST00000308488.10

RSF1-201, Transcript of remodeling and spacing factor 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RSF1, Length 11,550 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSF1-201ENST00000308488 TMEM235A6NFC5 223 aa7.53□□□□□ -1.2
RSF1-201ENST00000308488 CLCNKBP51801 687 aa7.53□□□□□ -1.2
RSF1-201ENST00000308488 NRG3P56975 720 aa7.53□□□□□ -1.2
RSF1-201ENST00000308488 SPCS3P61009 180 aa7.53□□□□□ -1.2
RSF1-201ENST00000308488 GPR33Q49SQ1 333 aa7.53□□□□□ -1.2
RSF1-201ENST00000308488 DPY19L2P1Q6NXN4 242 aa7.53□□□□□ -1.2
RSF1-201ENST00000308488 ADCK2Q7Z695 626 aa7.53□□□□□ -1.2
RSF1-201ENST00000308488 SPATA2LQ8IUW3 424 aaPredicted RBP7.53□□□□□ -1.2
RSF1-201ENST00000308488 BRIX1Q8TDN6 353 aaKnown RBP7.53□□□□□ -1.2
RSF1-201ENST00000308488 CASTOR1Q8WTX7 329 aa7.53□□□□□ -1.2
RSF1-201ENST00000308488 C22orf15Q8WYQ4 148 aa7.53□□□□□ -1.2
RSF1-201ENST00000308488 RAB7BQ96AH8 199 aa7.53□□□□□ -1.2
RSF1-201ENST00000308488 IMP3Q9NV31 184 aaKnown RBP7.53□□□□□ -1.2
RSF1-201ENST00000308488 FBXL2Q9UKC9 423 aa7.53□□□□□ -1.2
RSF1-201ENST00000308488 PCDHA2Q9Y5H9 948 aa7.53□□□□□ -1.2
RSF1-201ENST00000308488 PTP4A3O75365 173 aa7.52□□□□□ -1.2
RSF1-201ENST00000308488 PKMP14618 531 aaKnown RBP7.52□□□□□ -1.2
RSF1-201ENST00000308488 AVPR1BP47901 424 aa7.52□□□□□ -1.2
RSF1-201ENST00000308488 MBTD1Q05BQ5 628 aa7.52□□□□□ -1.2
RSF1-201ENST00000308488 ENPP6Q6UWR7 440 aa7.52□□□□□ -1.2
RSF1-201ENST00000308488 OTOP1Q7RTM1 612 aa7.52□□□□□ -1.2
RSF1-201ENST00000308488 FAM185AQ8N0U4 392 aa7.52□□□□□ -1.2
RSF1-201ENST00000308488 TRAM1L1Q8N609 369 aa7.52□□□□□ -1.2
RSF1-201ENST00000308488 DYNC2LI1Q8TCX1 351 aa7.52□□□□□ -1.2
RSF1-201ENST00000308488 FOXRED1Q96CU9 486 aaPredicted RBP7.52□□□□□ -1.2
RSF1-201ENST00000308488 NMNAT1Q9HAN9 279 aaPredicted RBP7.52□□□□□ -1.2
RSF1-201ENST00000308488 SCN3AQ9NY46 2000 aa7.52□□□□□ -1.2
RSF1-201ENST00000308488 E7ESA3 106 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 RHOP08100 348 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 EPHX2P34913 555 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 OR3A2P47893 321 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 SCGB1C1Q8TD33 95 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 FRS2Q8WU20 508 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 FKBP10Q96AY3 582 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 NOX3Q9HBY0 568 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 ISYNA1Q9NPH2 558 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 PURGQ9UJV8 347 aaKnown RBP7.52□□□□□ -1.21
RSF1-201ENST00000308488 TRABD2BA6NFA1 517 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 NPIPA2E9PIF3 369 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 C1GALT1C1LP0DN25 315 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 SPNP16150 400 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 RFX5P48382 616 aaPredicted RBP7.52□□□□□ -1.21
RSF1-201ENST00000308488 CACNB3P54284 484 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 TCP10Q12799 353 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 XKR3Q5GH77 459 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 SLC46A3Q7Z3Q1 461 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 KCNRGQ8N5I3 272 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 ACKR4Q9NPB9 350 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 NOCTQ9UK39 431 aaKnown RBP7.52□□□□□ -1.21
RSF1-201ENST00000308488 SPACA6W5XKT8 324 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 NME4O00746 187 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 L1CAMP32004 1257 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 RBMXP38159 391 aaKnown RBP7.52□□□□□ -1.21
RSF1-201ENST00000308488 ART1P52961 327 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 TMEM205Q6UW68 189 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 MCEMP1Q8IX19 187 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 FAM98AQ8NCA5 519 aaKnown RBP7.52□□□□□ -1.21
RSF1-201ENST00000308488 SMARCD2Q92925 531 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 C16orf58Q96GQ5 468 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 CSPG4P5Q96PW8 444 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 WDCPQ9H6R7 721 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 RIOX1Q9H6W3 641 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 FAM212BQ9NTI7 297 aaPredicted RBP7.52□□□□□ -1.21
RSF1-201ENST00000308488 CTSFQ9UBX1 484 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 ABHD14A-ACY1A0A1B0GW23 586 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 DRD5P21918 477 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 GABRA2P47869 451 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 EPHA5P54756 1037 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 IRF9Q00978 393 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 PARP15Q460N3 678 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 DBF4BQ8NFT6 615 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 CIPCQ9C0C6 399 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 SLC2A9Q9NRM0 540 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 GSKIPQ9P0R6 139 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 ATRNL1Q5VV63 1379 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 TACSTD2P09758 323 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 CRABP1P29762 137 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 HS3ST5Q8IZT8 346 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 MS4A15Q8N5U1 240 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 NIPA2Q8N8Q9 360 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 PPCDCQ96CD2 204 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 NIPSNAP3BQ9BS92 247 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 MRI1Q9BV20 369 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 MAGEB17A8MXT2 336 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 CIDEAO60543 219 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 GNMTQ14749 295 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 NFIXQ14938 502 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 LPCAT3Q6P1A2 487 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 LINGO4Q6UY18 593 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 SLC44A5Q8NCS7 719 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 PRDM9Q9NQV7 894 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 RPH3ALQ9UNE2 315 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 EXO1Q9UQ84 846 aaKnown RBP7.52□□□□□ -1.21
RSF1-201ENST00000308488 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.52□□□□□ -1.21
RSF1-201ENST00000308488 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.52□□□□□ -1.21
RSF1-201ENST00000308488 URADA6NGE7 173 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 E5RJQ4 531 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 PSMB1P20618 241 aaKnown RBP7.52□□□□□ -1.21
RSF1-201ENST00000308488 AGXTP21549 392 aa7.52□□□□□ -1.21
RSF1-201ENST00000308488 ALKBH1Q13686 389 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms