RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Nat3P50296 290 aa14□□□□□ -0.17
Nup88-202ENSMUST00000108530 MertkQ60805 994 aa14□□□□□ -0.17
Nup88-202ENSMUST00000108530 Egfl8Q6GUQ1 293 aa14□□□□□ -0.17
Nup88-202ENSMUST00000108530 Bhlhb9Q6PB60 539 aa14□□□□□ -0.17
Nup88-202ENSMUST00000108530 FukQ7TMC8 1090 aa14□□□□□ -0.17
Nup88-202ENSMUST00000108530 Lrrc75bQ7TPD7 306 aa14□□□□□ -0.17
Nup88-202ENSMUST00000108530 Fignl1Q8BPY9 683 aa14□□□□□ -0.17
Nup88-202ENSMUST00000108530 Csnk1g2Q8BVP5 415 aa14□□□□□ -0.17
Nup88-202ENSMUST00000108530 SynpoQ8CC35 929 aaKnown RBP14□□□□□ -0.17
Nup88-202ENSMUST00000108530 Olfr1390Q8VGW9 311 aa14□□□□□ -0.17
Nup88-202ENSMUST00000108530 Cela1Q91X79 266 aa14□□□□□ -0.17
Nup88-202ENSMUST00000108530 Pcdhb20Q91XZ9 799 aa14□□□□□ -0.17
Nup88-202ENSMUST00000108530 MvdQ99JF5 401 aa14□□□□□ -0.17
Nup88-202ENSMUST00000108530 Ints11Q9CWS4 600 aa14□□□□□ -0.17
Nup88-202ENSMUST00000108530 2010109A12RikQ9D875 119 aa14□□□□□ -0.17
Nup88-202ENSMUST00000108530 Ascl3Q9JJR7 174 aa14□□□□□ -0.17
Nup88-202ENSMUST00000108530 Adam23Q9R1V7 829 aa14□□□□□ -0.17
Nup88-202ENSMUST00000108530 FrylF8VQ05 3007 aa13.99□□□□□ -0.17
Nup88-202ENSMUST00000108530 Lama1P19137 3084 aa13.99□□□□□ -0.17
Nup88-202ENSMUST00000108530 Olfr1095A3KPP7 308 aa13.99□□□□□ -0.17
Nup88-202ENSMUST00000108530 EXOC1LB9EK06 172 aa13.99□□□□□ -0.17
Nup88-202ENSMUST00000108530 Sult2b1O35400 338 aa13.99□□□□□ -0.17
Nup88-202ENSMUST00000108530 GfapP03995 430 aa13.99□□□□□ -0.17
Nup88-202ENSMUST00000108530 Gria1P23818 907 aa13.99□□□□□ -0.17
Nup88-202ENSMUST00000108530 ThrbP37242 461 aa13.99□□□□□ -0.17
Nup88-202ENSMUST00000108530 Gm527Q4KL13 310 aa13.99□□□□□ -0.17
Nup88-202ENSMUST00000108530 Q5EBG8 199 aa13.99□□□□□ -0.17
Nup88-202ENSMUST00000108530 Ift52Q62559 426 aa13.99□□□□□ -0.17
Nup88-202ENSMUST00000108530 AstlQ6HA09 435 aa13.99□□□□□ -0.17
Nup88-202ENSMUST00000108530 Rundc3bQ6PDC0 408 aa13.99□□□□□ -0.17
Nup88-202ENSMUST00000108530 CslQ80X68 466 aa13.99□□□□□ -0.17
Nup88-202ENSMUST00000108530 NarsQ8BP47 559 aa13.99□□□□□ -0.17
Nup88-202ENSMUST00000108530 Vmn1r30Q8R2D2 302 aa13.99□□□□□ -0.17
Nup88-202ENSMUST00000108530 Med25Q8VCB2 745 aa13.99□□□□□ -0.17
Nup88-202ENSMUST00000108530 Clec2fQ8VI21 196 aa13.99□□□□□ -0.17
Nup88-202ENSMUST00000108530 MrgprhQ99MT8 321 aa13.99□□□□□ -0.17
Nup88-202ENSMUST00000108530 Prl8a8Q9DAS4 241 aa13.99□□□□□ -0.17
Nup88-202ENSMUST00000108530 Cldn6Q9Z262 219 aa13.99□□□□□ -0.17
Nup88-202ENSMUST00000108530 TprnA2AI08 749 aaKnown RBP13.98□□□□□ -0.17
Nup88-202ENSMUST00000108530 Vmn2r90E9PXJ8 863 aa13.98□□□□□ -0.17
Nup88-202ENSMUST00000108530 1700011I03RikE9PYL8 271 aa13.98□□□□□ -0.17
Nup88-202ENSMUST00000108530 A530032D15RikE9Q422 215 aa13.98□□□□□ -0.17
Nup88-202ENSMUST00000108530 Gpr27O54897 379 aa13.98□□□□□ -0.17
Nup88-202ENSMUST00000108530 P01667 111 aa13.98□□□□□ -0.17
Nup88-202ENSMUST00000108530 GypaP14220 168 aa13.98□□□□□ -0.17
Nup88-202ENSMUST00000108530 Hoxd11P23813 323 aa13.98□□□□□ -0.17
Nup88-202ENSMUST00000108530 Arhgap39P59281 1107 aa13.98□□□□□ -0.17
Nup88-202ENSMUST00000108530 Rps15aP62245 130 aaKnown RBP13.98□□□□□ -0.17
Nup88-202ENSMUST00000108530 Cct3P80318 545 aaKnown RBP13.98□□□□□ -0.17
Nup88-202ENSMUST00000108530 Zmat1Q3V0C1 714 aa13.98□□□□□ -0.17
Nup88-202ENSMUST00000108530 Sohlh1Q6IUP1 357 aa13.98□□□□□ -0.17
Nup88-202ENSMUST00000108530 Tmeff1Q6PFE7 372 aa13.98□□□□□ -0.17
Nup88-202ENSMUST00000108530 Ppp2r2bQ6ZWR4 443 aa13.98□□□□□ -0.17
Nup88-202ENSMUST00000108530 Utp4Q8R2N2 686 aaKnown RBP13.98□□□□□ -0.17
Nup88-202ENSMUST00000108530 Rnf8Q8VC56 488 aa13.98□□□□□ -0.17
Nup88-202ENSMUST00000108530 Cbr4Q91VT4 236 aa13.98□□□□□ -0.17
Nup88-202ENSMUST00000108530 Trpd52l3Q9CQ14 231 aa13.98□□□□□ -0.17
Nup88-202ENSMUST00000108530 Ccdc77Q9CZH8 489 aa13.98□□□□□ -0.17
Nup88-202ENSMUST00000108530 Sh3glb1Q9JK48 365 aa13.98□□□□□ -0.17
Nup88-202ENSMUST00000108530 TesminQ9WTJ6 475 aa13.98□□□□□ -0.17
Nup88-202ENSMUST00000108530 Cacna1bO55017 2327 aa13.98□□□□□ -0.17
Nup88-202ENSMUST00000108530 Klhl18A0A0G2JGN5 579 aa13.98□□□□□ -0.17
Nup88-202ENSMUST00000108530 Zfp395E9Q5N9 508 aa13.98□□□□□ -0.17
Nup88-202ENSMUST00000108530 Vmn1r86L7N213 316 aa13.98□□□□□ -0.17
Nup88-202ENSMUST00000108530 Stxbp1O08599 594 aa13.98□□□□□ -0.17
Nup88-202ENSMUST00000108530 Cyp2j5O54749 501 aa13.98□□□□□ -0.17
Nup88-202ENSMUST00000108530 Nipsnap2O55126 281 aa13.98□□□□□ -0.17
Nup88-202ENSMUST00000108530 H2-T23P06339 357 aa13.98□□□□□ -0.17
Nup88-202ENSMUST00000108530 Ptpn2Q06180 406 aa13.98□□□□□ -0.17
Nup88-202ENSMUST00000108530 AcadsQ07417 412 aaKnown RBP13.98□□□□□ -0.17
Nup88-202ENSMUST00000108530 MybphlQ5FW53 355 aa13.98□□□□□ -0.17
Nup88-202ENSMUST00000108530 Olfr169Q7TS53 313 aa13.98□□□□□ -0.17
Nup88-202ENSMUST00000108530 Amigo2Q80ZD9 519 aa13.98□□□□□ -0.17
Nup88-202ENSMUST00000108530 PgghgQ8BP56 690 aa13.98□□□□□ -0.17
Nup88-202ENSMUST00000108530 B4gat1Q8BWP8 415 aa13.98□□□□□ -0.17
Nup88-202ENSMUST00000108530 Stbd1Q8C7E7 338 aa13.98□□□□□ -0.17
Nup88-202ENSMUST00000108530 Spns1Q8R0G7 528 aa13.98□□□□□ -0.17
Nup88-202ENSMUST00000108530 SdslQ8R238 329 aa13.98□□□□□ -0.17
Nup88-202ENSMUST00000108530 Pcolce2Q8R4W6 414 aa13.98□□□□□ -0.17
Nup88-202ENSMUST00000108530 Tmem159Q922Z1 161 aa13.98□□□□□ -0.17
Nup88-202ENSMUST00000108530 HnrnpabQ99020 285 aaKnown RBP13.98□□□□□ -0.17
Nup88-202ENSMUST00000108530 Ifi44lQ9BDB7 447 aa13.98□□□□□ -0.17
Nup88-202ENSMUST00000108530 Tomm70Q9CZW5 611 aa13.98□□□□□ -0.17
Nup88-202ENSMUST00000108530 Wdr5bQ9D7H2 328 aa13.98□□□□□ -0.17
Nup88-202ENSMUST00000108530 Pbld1Q9DCG6 288 aa13.98□□□□□ -0.17
Nup88-202ENSMUST00000108530 Gm15013V9GWY0 266 aa13.98□□□□□ -0.17
Nup88-202ENSMUST00000108530 SptbP15508 2128 aa13.98□□□□□ -0.17
Nup88-202ENSMUST00000108530 Myf6P15375 242 aa13.97□□□□□ -0.17
Nup88-202ENSMUST00000108530 Atxn1P54254 791 aa13.97□□□□□ -0.17
Nup88-202ENSMUST00000108530 Nup43P59235 380 aa13.97□□□□□ -0.17
Nup88-202ENSMUST00000108530 Psme2P97372 239 aa13.97□□□□□ -0.17
Nup88-202ENSMUST00000108530 Ugt2b36Q3UEP4 530 aa13.97□□□□□ -0.17
Nup88-202ENSMUST00000108530 Sdc3Q64519 442 aa13.97□□□□□ -0.17
Nup88-202ENSMUST00000108530 Slc25a23Q6GQS1 467 aa13.97□□□□□ -0.17
Nup88-202ENSMUST00000108530 Olfr1231Q7TQZ8 313 aa13.97□□□□□ -0.17
Nup88-202ENSMUST00000108530 Ablim2Q8BL65 612 aa13.97□□□□□ -0.17
Nup88-202ENSMUST00000108530 Zcchc3Q8BPK2 400 aaKnown RBP13.97□□□□□ -0.17
Nup88-202ENSMUST00000108530 Pomgnt2Q8BW41 605 aa13.97□□□□□ -0.17
Nup88-202ENSMUST00000108530 PpcdcQ8BZB2 204 aa13.97□□□□□ -0.17
Nup88-202ENSMUST00000108530 Mmp21Q8K3F2 568 aa13.97□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 52.5 ms