RNA–Protein interactions for RNA: ENST00000640610.1

PAX6-273, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 2,730 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-273ENST00000640610 STRN4Q9NRL3 753 aa11.53□□□□□ -0.56
PAX6-273ENST00000640610 WDR17Q8IZU2 1322 aa11.53□□□□□ -0.56
PAX6-273ENST00000640610 ATP8B2P98198 1209 aa11.52□□□□□ -0.56
PAX6-273ENST00000640610 MPRIPQ6WCQ1 1025 aa11.52□□□□□ -0.56
PAX6-273ENST00000640610 UNC5CLQ8IV45 518 aa11.52□□□□□ -0.56
PAX6-273ENST00000640610 LRRCC1Q9C099 1032 aa11.52□□□□□ -0.56
PAX6-273ENST00000640610 EVA1CP58658 441 aa11.52□□□□□ -0.57
PAX6-273ENST00000640610 CHPF2Q9P2E5 772 aa11.52□□□□□ -0.57
PAX6-273ENST00000640610 MBD3O95983 291 aa11.51□□□□□ -0.57
PAX6-273ENST00000640610 GNAI3P08754 354 aa11.51□□□□□ -0.57
PAX6-273ENST00000640610 EIF4A1P60842 406 aaKnown RBP11.51□□□□□ -0.57
PAX6-273ENST00000640610 DMTNQ08495 405 aa11.51□□□□□ -0.57
PAX6-273ENST00000640610 KIAA2012Q0VF49 1180 aa11.51□□□□□ -0.57
PAX6-273ENST00000640610 LARP1Q6PKG0 1096 aaKnown RBP11.51□□□□□ -0.57
PAX6-273ENST00000640610 ZGPATQ8N5A5 531 aaKnown RBP11.51□□□□□ -0.57
PAX6-273ENST00000640610 CEMIPQ8WUJ3 1361 aa11.51□□□□□ -0.57
PAX6-273ENST00000640610 PRPF40AO75400 957 aaKnown RBP11.51□□□□□ -0.57
PAX6-273ENST00000640610 TOM1L2Q6ZVM7 507 aa11.51□□□□□ -0.57
PAX6-273ENST00000640610 GPT2Q8TD30 523 aa11.51□□□□□ -0.57
PAX6-273ENST00000640610 RILPL2Q969X0 211 aa11.51□□□□□ -0.57
PAX6-273ENST00000640610 OSBPL3Q9H4L5 887 aa11.51□□□□□ -0.57
PAX6-273ENST00000640610 ERC2O15083 957 aa11.51□□□□□ -0.57
PAX6-273ENST00000640610 ST18O60284 1047 aa11.51□□□□□ -0.57
PAX6-273ENST00000640610 NBPF7P0C2Y1 421 aaPredicted RBP11.51□□□□□ -0.57
PAX6-273ENST00000640610 MX1P20591 662 aa11.51□□□□□ -0.57
PAX6-273ENST00000640610 CASC1Q6TDU7 716 aa11.51□□□□□ -0.57
PAX6-273ENST00000640610 NUTM1Q86Y26 1132 aa11.51□□□□□ -0.57
PAX6-273ENST00000640610 MYRIPQ8NFW9 859 aa11.51□□□□□ -0.57
PAX6-273ENST00000640610 IL25Q9H293 177 aa11.51□□□□□ -0.57
PAX6-273ENST00000640610 NRAPQ86VF7 1730 aa11.5□□□□□ -0.57
PAX6-273ENST00000640610 PRAMEF22A3QJZ6 481 aa11.5□□□□□ -0.57
PAX6-273ENST00000640610 TRIM6-TRIM34B2RNG4 842 aa11.5□□□□□ -0.57
PAX6-273ENST00000640610 MAP4K4O95819 1239 aaPredicted RBP11.5□□□□□ -0.57
PAX6-273ENST00000640610 UBTFL1P0CB47 393 aaPredicted RBP11.5□□□□□ -0.57
PAX6-273ENST00000640610 ZNF530Q6P9A1 599 aaPredicted RBP11.5□□□□□ -0.57
PAX6-273ENST00000640610 CHAMP1Q96JM3 812 aa11.5□□□□□ -0.57
PAX6-273ENST00000640610 PRIMPOLQ96LW4 560 aa11.5□□□□□ -0.57
PAX6-273ENST00000640610 LRP6O75581 1613 aa11.5□□□□□ -0.57
PAX6-273ENST00000640610 HMGN5P82970 282 aaKnown RBP11.5□□□□□ -0.57
PAX6-273ENST00000640610 PALD1Q9ULE6 856 aa11.5□□□□□ -0.57
PAX6-273ENST00000640610 PPP1R42Q7Z4L9 355 aa11.49□□□□□ -0.57
PAX6-273ENST00000640610 TMEM63CQ9P1W3 806 aa11.49□□□□□ -0.57
PAX6-273ENST00000640610 RBM27Q9P2N5 1060 aaKnown RBP11.49□□□□□ -0.57
PAX6-273ENST00000640610 SPATA31A6Q5VVP1 1343 aa11.49□□□□□ -0.57
PAX6-273ENST00000640610 MEGF6O75095 1541 aa11.49□□□□□ -0.57
PAX6-273ENST00000640610 NWD2Q9ULI1 1742 aa11.49□□□□□ -0.57
PAX6-273ENST00000640610 SYCE3A1L190 88 aa11.49□□□□□ -0.57
PAX6-273ENST00000640610 PI4KAP2A4QPH2 592 aa11.49□□□□□ -0.57
PAX6-273ENST00000640610 PTMAP06454 111 aaKnown RBP11.49□□□□□ -0.57
PAX6-273ENST00000640610 PI4KAP1Q8N8J0 262 aa11.49□□□□□ -0.57
PAX6-273ENST00000640610 BTBD11A6QL63 1104 aa11.48□□□□□ -0.57
PAX6-273ENST00000640610 REC8O95072 547 aa11.48□□□□□ -0.57
PAX6-273ENST00000640610 PROSER3Q2NL68 480 aa11.48□□□□□ -0.57
PAX6-273ENST00000640610 ESYT1Q9BSJ8 1104 aa11.48□□□□□ -0.57
PAX6-273ENST00000640610 CARD10Q9BWT7 1032 aa11.48□□□□□ -0.57
PAX6-273ENST00000640610 NOL8Q76FK4 1167 aaKnown RBP11.48□□□□□ -0.57
PAX6-273ENST00000640610 RAPGEF4Q8WZA2 1011 aa11.48□□□□□ -0.57
PAX6-273ENST00000640610 SURF6O75683 361 aaKnown RBP11.47□□□□□ -0.57
PAX6-273ENST00000640610 CHMLP26374 656 aa11.47□□□□□ -0.57
PAX6-273ENST00000640610 GTF2F1P35269 517 aaKnown RBP eCLIP11.47□□□□□ -0.57
PAX6-273ENST00000640610 SYAP1Q96A49 352 aaPredicted RBP11.47□□□□□ -0.57
PAX6-273ENST00000640610 C8orf37Q96NL8 207 aa11.47□□□□□ -0.57
PAX6-273ENST00000640610 SRCIN1Q9C0H9 1055 aa11.47□□□□□ -0.57
PAX6-273ENST00000640610 SOS1Q07889 1333 aaPredicted RBP11.47□□□□□ -0.57
PAX6-273ENST00000640610 SLIT2O94813 1529 aa11.47□□□□□ -0.57
PAX6-273ENST00000640610 TEFQ10587 303 aa11.47□□□□□ -0.57
PAX6-273ENST00000640610 PLEKHO1Q53GL0 409 aaPredicted RBP11.47□□□□□ -0.57
PAX6-273ENST00000640610 BEND3Q5T5X7 828 aa11.47□□□□□ -0.57
PAX6-273ENST00000640610 SSH3Q8TE77 659 aa11.47□□□□□ -0.57
PAX6-273ENST00000640610 ARID3AQ99856 593 aa11.47□□□□□ -0.57
PAX6-273ENST00000640610 GTPBP4Q9BZE4 634 aaKnown RBP11.47□□□□□ -0.57
PAX6-273ENST00000640610 BABAM1Q9NWV8 329 aa11.47□□□□□ -0.57
PAX6-273ENST00000640610 PARP4Q9UKK3 1724 aaKnown RBP11.47□□□□□ -0.57
PAX6-273ENST00000640610 PKD1L3Q7Z443 1732 aa11.46□□□□□ -0.57
PAX6-273ENST00000640610 SRGAP3O43295 1099 aa11.46□□□□□ -0.57
PAX6-273ENST00000640610 ZSCAN20P17040 1043 aaPredicted RBP11.46□□□□□ -0.57
PAX6-273ENST00000640610 TATP17735 454 aaPredicted RBP11.46□□□□□ -0.57
PAX6-273ENST00000640610 AMOTQ4VCS5 1084 aa11.46□□□□□ -0.57
PAX6-273ENST00000640610 DNTTIP2Q5QJE6 756 aaKnown RBP11.46□□□□□ -0.57
PAX6-273ENST00000640610 FOXD4L5Q5VV16 416 aaPredicted RBP11.46□□□□□ -0.57
PAX6-273ENST00000640610 FOXD4L4Q8WXT5 416 aaPredicted RBP11.46□□□□□ -0.57
PAX6-273ENST00000640610 TSPY26PQ9H489 355 aa11.46□□□□□ -0.57
PAX6-273ENST00000640610 ANO2Q9NQ90 1003 aa11.46□□□□□ -0.57
PAX6-273ENST00000640610 PRDM10Q9NQV6 1147 aa11.46□□□□□ -0.57
PAX6-273ENST00000640610 ADCY9O60503 1353 aa11.46□□□□□ -0.57
PAX6-273ENST00000640610 TUBGCP6Q96RT7 1819 aa11.46□□□□□ -0.57
PAX6-273ENST00000640610 RNMTO43148 476 aaKnown RBP11.46□□□□□ -0.58
PAX6-273ENST00000640610 NEK4P51957 841 aa11.46□□□□□ -0.58
PAX6-273ENST00000640610 AKAP4Q5JQC9 854 aa11.46□□□□□ -0.58
PAX6-273ENST00000640610 DNAAF4Q8WXU2 420 aa11.46□□□□□ -0.58
PAX6-273ENST00000640610 NGLY1Q96IV0 654 aa11.46□□□□□ -0.58
PAX6-273ENST00000640610 ZDHHC9Q9Y397 364 aa11.46□□□□□ -0.58
PAX6-273ENST00000640610 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.46□□□□□ -0.58
PAX6-273ENST00000640610 PXDNLA1KZ92 1463 aa11.46□□□□□ -0.58
PAX6-273ENST00000640610 ZHX1Q9UKY1 873 aaPredicted RBP11.45□□□□□ -0.58
PAX6-273ENST00000640610 PHF14O94880 888 aa11.45□□□□□ -0.58
PAX6-273ENST00000640610 KIF20AO95235 890 aa11.45□□□□□ -0.58
PAX6-273ENST00000640610 POLA2Q14181 598 aa11.45□□□□□ -0.58
PAX6-273ENST00000640610 PIBF1Q8WXW3 757 aa11.45□□□□□ -0.58
PAX6-273ENST00000640610 STAP2Q9UGK3 403 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms