RNA–Protein interactions for RNA: ENST00000640482.1

VEGFA-230, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-230ENST00000640482 DLEC1Q9Y238 1755 aa33.06■■■□□ 2.88
VEGFA-230ENST00000640482 CCDC24Q8N4L8 307 aa33.04■■■□□ 2.88
VEGFA-230ENST00000640482 NBPF5PQ86XG9 351 aaPredicted RBP33.03■■■□□ 2.88
VEGFA-230ENST00000640482 NGEFQ8N5V2 710 aa33.03■■■□□ 2.88
VEGFA-230ENST00000640482 ERBB4Q15303 1308 aa33.02■■■□□ 2.88
VEGFA-230ENST00000640482 NIP7Q9Y221 180 aaKnown RBP eCLIP33.02■■■□□ 2.88
VEGFA-230ENST00000640482 ANKRD31Q8N7Z5 1873 aa33.01■■■□□ 2.88
VEGFA-230ENST00000640482 C9orf131Q5VYM1 1079 aa33.01■■■□□ 2.87
VEGFA-230ENST00000640482 ZNF622Q969S3 477 aaKnown RBP eCLIP33.01■■■□□ 2.873e-13■□□□□ 10.7
VEGFA-230ENST00000640482 MYL6BP14649 208 aa33■■■□□ 2.87
VEGFA-230ENST00000640482 KIF6Q6ZMV9 814 aa33■■■□□ 2.87
VEGFA-230ENST00000640482 TRIM35Q9UPQ4 493 aa33■■■□□ 2.87
VEGFA-230ENST00000640482 ERVV-1B6SEH8 477 aa32.99■■■□□ 2.87
VEGFA-230ENST00000640482 HLFQ16534 295 aa32.99■■■□□ 2.87
VEGFA-230ENST00000640482 TPTE2Q6XPS3 522 aa32.98■■■□□ 2.87
VEGFA-230ENST00000640482 MAP3K15Q6ZN16 1313 aa32.98■■■□□ 2.87
VEGFA-230ENST00000640482 LAS1LQ9Y4W2 734 aaKnown RBP32.96■■■□□ 2.87
VEGFA-230ENST00000640482 CHL1O00533 1208 aa32.95■■■□□ 2.87
VEGFA-230ENST00000640482 EIF2S2P20042 333 aaKnown RBP32.95■■■□□ 2.87
VEGFA-230ENST00000640482 TTLL7Q6ZT98 887 aa32.95■■■□□ 2.87
VEGFA-230ENST00000640482 RNF181Q9P0P0 153 aa32.95■■■□□ 2.87
VEGFA-230ENST00000640482 ZNF316A6NFI3 1004 aaPredicted RBP32.94■■■□□ 2.86
VEGFA-230ENST00000640482 COL11A2P13942 1736 aaPredicted RBP32.94■■■□□ 2.86
VEGFA-230ENST00000640482 STYK1Q6J9G0 422 aa32.93■■■□□ 2.86
VEGFA-230ENST00000640482 CNKSR1Q969H4 720 aa32.93■■■□□ 2.86
VEGFA-230ENST00000640482 FAM177BA6PVY3 158 aa32.92■■■□□ 2.86
VEGFA-230ENST00000640482 SRGNP10124 158 aa32.92■■■□□ 2.86
VEGFA-230ENST00000640482 MASTLQ96GX5 879 aa32.92■■■□□ 2.86
VEGFA-230ENST00000640482 GTF2E1P29083 439 aaPredicted RBP32.91■■■□□ 2.86
VEGFA-230ENST00000640482 RASSF7Q02833 373 aa32.91■■■□□ 2.86
VEGFA-230ENST00000640482 NYXQ9GZU5 481 aa32.91■■■□□ 2.86
VEGFA-230ENST00000640482 ZBTB3Q9H5J0 574 aa32.91■■■□□ 2.86
VEGFA-230ENST00000640482 APAF1O14727 1248 aa32.89■■■□□ 2.86
VEGFA-230ENST00000640482 SENP3-EIF4A1A0A087X0R7 540 aa32.88■■■□□ 2.85
VEGFA-230ENST00000640482 LMNB1P20700 586 aa32.88■■■□□ 2.85
VEGFA-230ENST00000640482 PDIA6Q15084 440 aa32.88■■■□□ 2.85
VEGFA-230ENST00000640482 C21orf2O43822 256 aa32.87■■■□□ 2.85
VEGFA-230ENST00000640482 CFAP44Q96MT7 982 aa32.87■■■□□ 2.85
VEGFA-230ENST00000640482 ZNF219Q9P2Y4 722 aaPredicted RBP32.87■■■□□ 2.85
VEGFA-230ENST00000640482 KLRG2A4D1S0 409 aaPredicted RBP32.86■■■□□ 2.85
VEGFA-230ENST00000640482 KIF3CO14782 793 aa32.86■■■□□ 2.85
VEGFA-230ENST00000640482 NPR1P16066 1061 aa32.86■■■□□ 2.85
VEGFA-230ENST00000640482 GIGYF2Q6Y7W6 1299 aaKnown RBP32.86■■■□□ 2.85
VEGFA-230ENST00000640482 LRP10Q7Z4F1 713 aa32.86■■■□□ 2.85
VEGFA-230ENST00000640482 NUP98P52948 1817 aa32.86■■■□□ 2.85
VEGFA-230ENST00000640482 ZC3H4Q9UPT8 1303 aaKnown RBP32.85■■■□□ 2.85
VEGFA-230ENST00000640482 SBF1O95248 1867 aa32.85■■■□□ 2.85
VEGFA-230ENST00000640482 CALD1Q05682 793 aaKnown RBP32.85■■■□□ 2.85
VEGFA-230ENST00000640482 PRPF40BQ6NWY9 871 aaKnown RBP32.85■■■□□ 2.85
VEGFA-230ENST00000640482 NECTIN2Q92692 538 aa32.85■■■□□ 2.85
VEGFA-230ENST00000640482 NFKBIEO00221 500 aa32.84■■■□□ 2.85
VEGFA-230ENST00000640482 HOXB7P09629 217 aa32.84■■■□□ 2.85
VEGFA-230ENST00000640482 GPTP24298 496 aa32.84■■■□□ 2.85
VEGFA-230ENST00000640482 KRT24Q2M2I5 525 aa32.84■■■□□ 2.85
VEGFA-230ENST00000640482 PROSER3Q2NL68 480 aa32.84■■■□□ 2.85
VEGFA-230ENST00000640482 SOGA3Q5TF21 947 aa32.84■■■□□ 2.85
VEGFA-230ENST00000640482 IBTKQ9P2D0 1353 aaPredicted RBP32.83■■■□□ 2.85
VEGFA-230ENST00000640482 KDM2BQ8NHM5 1336 aa32.83■■■□□ 2.85
VEGFA-230ENST00000640482 ANXA1P04083 346 aa32.83■■■□□ 2.85
VEGFA-230ENST00000640482 ZNF34Q8IZ26 560 aa32.82■■■□□ 2.84
VEGFA-230ENST00000640482 UBN2Q6ZU65 1347 aa32.81■■■□□ 2.84
VEGFA-230ENST00000640482 DDX21Q9NR30 783 aaKnown RBP eCLIP32.81■■■□□ 2.84
VEGFA-230ENST00000640482 ANP32CO43423 234 aa32.8■■■□□ 2.84
VEGFA-230ENST00000640482 HDGFL1Q5TGJ6 251 aa32.8■■■□□ 2.84
VEGFA-230ENST00000640482 NUTM1Q86Y26 1132 aa32.8■■■□□ 2.84
VEGFA-230ENST00000640482 NMRK2Q9NPI5 230 aa32.8■■■□□ 2.84
VEGFA-230ENST00000640482 ARFGEF2Q9Y6D5 1785 aa32.8■■■□□ 2.84
VEGFA-230ENST00000640482 PRELPP51888 382 aa32.79■■■□□ 2.84
VEGFA-230ENST00000640482 CCDC184Q52MB2 194 aa32.79■■■□□ 2.84
VEGFA-230ENST00000640482 PARP10Q53GL7 1025 aa32.79■■■□□ 2.84
VEGFA-230ENST00000640482 COPS6Q7L5N1 327 aa32.79■■■□□ 2.84
VEGFA-230ENST00000640482 PPP1R42Q7Z4L9 355 aa32.79■■■□□ 2.84
VEGFA-230ENST00000640482 MBIPQ9NS73 344 aa32.79■■■□□ 2.84
VEGFA-230ENST00000640482 IFT57Q9NWB7 429 aa32.79■■■□□ 2.84
VEGFA-230ENST00000640482 SLX4Q8IY92 1834 aa32.79■■■□□ 2.84
VEGFA-230ENST00000640482 GNAI1P63096 354 aa32.78■■■□□ 2.84
VEGFA-230ENST00000640482 ERFEQ4G0M1 354 aa32.78■■■□□ 2.84
VEGFA-230ENST00000640482 SUSD4Q5VX71 490 aa32.78■■■□□ 2.84
VEGFA-230ENST00000640482 XAGE3Q8WTP9 111 aa32.78■■■□□ 2.84
VEGFA-230ENST00000640482 ABCC12Q96J65 1359 aa32.78■■■□□ 2.84
VEGFA-230ENST00000640482 LTBP3Q9NS15 1303 aa32.77■■■□□ 2.84
VEGFA-230ENST00000640482 ZNF853P0CG23 659 aa32.77■■■□□ 2.84
VEGFA-230ENST00000640482 ALDH1B1P30837 517 aa32.77■■■□□ 2.84
VEGFA-230ENST00000640482 AIMP1Q12904 312 aaKnown RBP32.77■■■□□ 2.84
VEGFA-230ENST00000640482 TAOK3Q9H2K8 898 aa32.77■■■□□ 2.84
VEGFA-230ENST00000640482 RIC1Q4ADV7 1423 aa32.77■■■□□ 2.84
VEGFA-230ENST00000640482 CACNA1SQ13698 1873 aa32.76■■■□□ 2.84
VEGFA-230ENST00000640482 HSP90AB3PQ58FF7 597 aa32.76■■■□□ 2.83
VEGFA-230ENST00000640482 CHPF2Q9P2E5 772 aa32.76■■■□□ 2.83
VEGFA-230ENST00000640482 DUSP27Q5VZP5 1158 aa32.75■■■□□ 2.83
VEGFA-230ENST00000640482 FER1L6Q2WGJ9 1857 aa32.75■■■□□ 2.83
VEGFA-230ENST00000640482 TOMM70O94826 608 aa32.74■■■□□ 2.83
VEGFA-230ENST00000640482 NTSR2O95665 410 aa32.74■■■□□ 2.83
VEGFA-230ENST00000640482 CRY2Q49AN0 593 aa32.74■■■□□ 2.83
VEGFA-230ENST00000640482 CCDC93Q567U6 631 aa32.74■■■□□ 2.83
VEGFA-230ENST00000640482 DBF4Q9UBU7 674 aaPredicted RBP32.74■■■□□ 2.83
VEGFA-230ENST00000640482 TNRC6CQ9HCJ0 1690 aaKnown RBP32.74■■■□□ 2.83
VEGFA-230ENST00000640482 C7orf43Q8WVR3 580 aa32.73■■■□□ 2.83
VEGFA-230ENST00000640482 MRS2Q9HD23 443 aa32.73■■■□□ 2.83
VEGFA-230ENST00000640482 C16orf71Q8IYS4 520 aaPredicted RBP32.72■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 522.6 ms