RNA–Protein interactions for RNA: ENST00000636389.1

CACNA1A-225, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-225ENST00000636389 HAUS7Q99871 368 aa20.13■□□□□ 0.81
CACNA1A-225ENST00000636389 AMPD3Q01432 767 aa20.13■□□□□ 0.81
CACNA1A-225ENST00000636389 TMOD3Q9NYL9 352 aa20.13■□□□□ 0.81
CACNA1A-225ENST00000636389 ZBTB16Q05516 673 aa20.13■□□□□ 0.81
CACNA1A-225ENST00000636389 ATF7IPQ6VMQ6 1270 aa20.13■□□□□ 0.81
CACNA1A-225ENST00000636389 TCP11L2Q8N4U5 519 aa20.12■□□□□ 0.81
CACNA1A-225ENST00000636389 TCP11L1Q9NUJ3 509 aa20.12■□□□□ 0.81
CACNA1A-225ENST00000636389 BIRC2Q13490 618 aa20.12■□□□□ 0.81
CACNA1A-225ENST00000636389 PRPF31Q8WWY3 499 aaKnown RBP20.12■□□□□ 0.81
CACNA1A-225ENST00000636389 ANO10Q9NW15 660 aa20.12■□□□□ 0.81
CACNA1A-225ENST00000636389 CECR2Q9BXF3 1484 aa20.12■□□□□ 0.81
CACNA1A-225ENST00000636389 HSF2BPO75031 334 aa20.12■□□□□ 0.81
CACNA1A-225ENST00000636389 MAP3K12Q12852 859 aa20.12■□□□□ 0.81
CACNA1A-225ENST00000636389 ZNF622Q969S3 477 aaKnown RBP eCLIP20.12■□□□□ 0.81
CACNA1A-225ENST00000636389 PRAM1Q96QH2 718 aa20.12■□□□□ 0.81
CACNA1A-225ENST00000636389 KIF4AO95239 1232 aa20.11■□□□□ 0.81
CACNA1A-225ENST00000636389 IDEP14735 1019 aa20.11■□□□□ 0.81
CACNA1A-225ENST00000636389 SMARCC1Q92922 1105 aaPredicted RBP20.11■□□□□ 0.81
CACNA1A-225ENST00000636389 STAC3Q96MF2 364 aa20.11■□□□□ 0.81
CACNA1A-225ENST00000636389 FERMT3Q86UX7 667 aa20.11■□□□□ 0.81
CACNA1A-225ENST00000636389 CLIP2Q9UDT6 1046 aa20.11■□□□□ 0.81
CACNA1A-225ENST00000636389 ZNF213O14771 459 aa20.11■□□□□ 0.81
CACNA1A-225ENST00000636389 HMGB2P26583 209 aaKnown RBP20.11■□□□□ 0.81
CACNA1A-225ENST00000636389 SLC5A1P13866 664 aa20.11■□□□□ 0.81
CACNA1A-225ENST00000636389 RPUSD2Q8IZ73 545 aaKnown RBP20.11■□□□□ 0.81
CACNA1A-225ENST00000636389 MKRN1Q9UHC7 482 aaKnown RBP20.11■□□□□ 0.81
CACNA1A-225ENST00000636389 ADAMTS8Q9UP79 889 aa20.11■□□□□ 0.81
CACNA1A-225ENST00000636389 GEN1Q17RS7 908 aa20.1■□□□□ 0.81
CACNA1A-225ENST00000636389 ARHGAP5Q13017 1502 aa20.1■□□□□ 0.81
CACNA1A-225ENST00000636389 ADAMTS2O95450 1211 aa20.1■□□□□ 0.81
CACNA1A-225ENST00000636389 BOLA2Q9H3K6 86 aa20.1■□□□□ 0.81
CACNA1A-225ENST00000636389 TTC12Q9H892 705 aaPredicted RBP20.1■□□□□ 0.81
CACNA1A-225ENST00000636389 NCBP1Q09161 790 aaKnown RBP20.1■□□□□ 0.81
CACNA1A-225ENST00000636389 MPRIPQ6WCQ1 1025 aa20.1■□□□□ 0.81
CACNA1A-225ENST00000636389 GMNNO75496 209 aa20.1■□□□□ 0.81
CACNA1A-225ENST00000636389 IFIT3O14879 490 aaKnown RBP20.09■□□□□ 0.81
CACNA1A-225ENST00000636389 CHD1LQ86WJ1 897 aa20.09■□□□□ 0.81
CACNA1A-225ENST00000636389 TXNDC16Q9P2K2 825 aa20.09■□□□□ 0.81
CACNA1A-225ENST00000636389 CRCPO75575 148 aa20.09■□□□□ 0.81
CACNA1A-225ENST00000636389 DDX46Q7L014 1031 aaKnown RBP20.09■□□□□ 0.81
CACNA1A-225ENST00000636389 CKAP4Q07065 602 aaKnown RBP20.09■□□□□ 0.81
CACNA1A-225ENST00000636389 CCT2P78371 535 aaKnown RBP20.09■□□□□ 0.81
CACNA1A-225ENST00000636389 CCDC117Q8IWD4 279 aaPredicted RBP20.09■□□□□ 0.81
CACNA1A-225ENST00000636389 GOLGA8AA7E2F4 631 aa20.08■□□□□ 0.81
CACNA1A-225ENST00000636389 GOLGA8BA8MQT2 603 aa20.08■□□□□ 0.81
CACNA1A-225ENST00000636389 CABP5Q9NP86 173 aa20.08■□□□□ 0.81
CACNA1A-225ENST00000636389 MRVI1Q9Y6F6 885 aa20.08■□□□□ 0.81
CACNA1A-225ENST00000636389 DDX12PQ92771 950 aa20.08■□□□□ 0.81
CACNA1A-225ENST00000636389 BIN2Q9UBW5 565 aaPredicted RBP20.08■□□□□ 0.81
CACNA1A-225ENST00000636389 KRT13P13646 458 aa20.08■□□□□ 0.81
CACNA1A-225ENST00000636389 CCDC50Q8IVM0 306 aa20.08■□□□□ 0.81
CACNA1A-225ENST00000636389 EEF2P13639 858 aaKnown RBP20.08■□□□□ 0.8
CACNA1A-225ENST00000636389 CDK19Q9BWU1 502 aa20.08■□□□□ 0.8
CACNA1A-225ENST00000636389 ZC3H6P61129 1189 aaKnown RBP20.08■□□□□ 0.8
CACNA1A-225ENST00000636389 SEPT6Q14141 434 aa20.08■□□□□ 0.8
CACNA1A-225ENST00000636389 IFIT5Q13325 482 aaKnown RBP20.07■□□□□ 0.8
CACNA1A-225ENST00000636389 IFI16Q16666 785 aaKnown RBP20.07■□□□□ 0.8
CACNA1A-225ENST00000636389 FAM114A1Q8IWE2 563 aa20.07■□□□□ 0.8
CACNA1A-225ENST00000636389 PLVAPQ9BX97 442 aa20.07■□□□□ 0.8
CACNA1A-225ENST00000636389 CWC25Q9NXE8 425 aaPredicted RBP20.07■□□□□ 0.8
CACNA1A-225ENST00000636389 KIF5AQ12840 1032 aa20.07■□□□□ 0.8
CACNA1A-225ENST00000636389 KIF2AO00139 706 aaPredicted RBP20.07■□□□□ 0.8
CACNA1A-225ENST00000636389 TBCAO75347 108 aaKnown RBP20.07■□□□□ 0.8
CACNA1A-225ENST00000636389 GAS8O95995 478 aa20.07■□□□□ 0.8
CACNA1A-225ENST00000636389 CCT6BQ92526 530 aa20.07■□□□□ 0.8
CACNA1A-225ENST00000636389 SMC6Q96SB8 1091 aa20.06■□□□□ 0.8
CACNA1A-225ENST00000636389 BIN1O00499 593 aa20.06■□□□□ 0.8
CACNA1A-225ENST00000636389 EXOC1Q9NV70 894 aa20.06■□□□□ 0.8
CACNA1A-225ENST00000636389 HLA-DOAP06340 250 aa20.06■□□□□ 0.8
CACNA1A-225ENST00000636389 CCDC12Q8WUD4 166 aaPredicted RBP20.06■□□□□ 0.8
CACNA1A-225ENST00000636389 RRS1Q15050 365 aaKnown RBP20.06■□□□□ 0.8
CACNA1A-225ENST00000636389 MYD88Q99836 296 aa20.06■□□□□ 0.8
CACNA1A-225ENST00000636389 MIS18AQ9NYP9 233 aa20.06■□□□□ 0.8
CACNA1A-225ENST00000636389 GTF2F1P35269 517 aaKnown RBP eCLIP20.05■□□□□ 0.8
CACNA1A-225ENST00000636389 KAT14Q9H8E8 782 aa20.05■□□□□ 0.8
CACNA1A-225ENST00000636389 CCDC172P0C7W6 258 aa20.05■□□□□ 0.8
CACNA1A-225ENST00000636389 AKNAD1Q5T1N1 836 aa20.05■□□□□ 0.8
CACNA1A-225ENST00000636389 OSCARQ8IYS5 282 aa20.05■□□□□ 0.8
CACNA1A-225ENST00000636389 C16orf45Q96MC5 204 aaPredicted RBP20.05■□□□□ 0.8
CACNA1A-225ENST00000636389 CFAP157Q5JU67 520 aa20.05■□□□□ 0.8
CACNA1A-225ENST00000636389 TMC6Q7Z403 805 aa20.05■□□□□ 0.8
CACNA1A-225ENST00000636389 ZSWIM4Q9H7M6 989 aa20.05■□□□□ 0.8
CACNA1A-225ENST00000636389 HSPA4P34932 840 aa20.04■□□□□ 0.8
CACNA1A-225ENST00000636389 CCDC65Q8IXS2 484 aa20.04■□□□□ 0.8
CACNA1A-225ENST00000636389 ZNF526Q8TF50 670 aaPredicted RBP20.04■□□□□ 0.8
CACNA1A-225ENST00000636389 TSPY2A6NKD2 308 aa20.04■□□□□ 0.8
CACNA1A-225ENST00000636389 PANK2Q9BZ23 570 aa20.04■□□□□ 0.8
CACNA1A-225ENST00000636389 CCDC14Q49A88 953 aa20.04■□□□□ 0.8
CACNA1A-225ENST00000636389 MAK16Q9BXY0 300 aaKnown RBP20.04■□□□□ 0.8
CACNA1A-225ENST00000636389 PRPF40BQ6NWY9 871 aaKnown RBP20.03■□□□□ 0.8
CACNA1A-225ENST00000636389 RASAL2Q9UJF2 1139 aa20.03■□□□□ 0.8
CACNA1A-225ENST00000636389 NSRP1Q9H0G5 558 aaKnown RBP20.03■□□□□ 0.8
CACNA1A-225ENST00000636389 KIF5BP33176 963 aa20.03■□□□□ 0.8
CACNA1A-225ENST00000636389 MNAT1P51948 309 aa20.03■□□□□ 0.8
CACNA1A-225ENST00000636389 HYPKQ9NX55 129 aa20.03■□□□□ 0.8
CACNA1A-225ENST00000636389 CUL4BQ13620 913 aa20.03■□□□□ 0.8
CACNA1A-225ENST00000636389 ANKS4BQ8N8V4 417 aa20.03■□□□□ 0.8
CACNA1A-225ENST00000636389 SELENOOQ9BVL4 669 aa20.03■□□□□ 0.8
CACNA1A-225ENST00000636389 CCDC183Q5T5S1 534 aa20.02■□□□□ 0.8
CACNA1A-225ENST00000636389 MSL1Q68DK7 614 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms