RNA–Protein interactions for RNA: ENST00000635857.1

LIN28B-202, Transcript of lin-28 homolog B, humanhuman

TSL 5

Gene LIN28B, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-202ENST00000635857 MAP3K15Q6ZN16 1313 aa22.02■■□□□ 1.12
LIN28B-202ENST00000635857 N4BP2Q86UW6 1770 aaPredicted RBP22.02■■□□□ 1.11
LIN28B-202ENST00000635857 ERVV-1B6SEH8 477 aa22.01■■□□□ 1.11
LIN28B-202ENST00000635857 DDX21Q9NR30 783 aaKnown RBP eCLIP22.01■■□□□ 1.11
LIN28B-202ENST00000635857 DBF4Q9UBU7 674 aaPredicted RBP22.01■■□□□ 1.11
LIN28B-202ENST00000635857 NIP7Q9Y221 180 aaKnown RBP eCLIP22.01■■□□□ 1.11
LIN28B-202ENST00000635857 GRIN3BO60391 1043 aa22■■□□□ 1.11
LIN28B-202ENST00000635857 ST5P78524 1137 aa22■■□□□ 1.11
LIN28B-202ENST00000635857 CNBD1Q8NA66 436 aa22■■□□□ 1.11
LIN28B-202ENST00000635857 TSR2Q969E8 191 aaKnown RBP22■■□□□ 1.11
LIN28B-202ENST00000635857 ZBTB3Q9H5J0 574 aa22■■□□□ 1.11
LIN28B-202ENST00000635857 PXDNLA1KZ92 1463 aa22■■□□□ 1.11
LIN28B-202ENST00000635857 NUP98P52948 1817 aa21.99■■□□□ 1.11
LIN28B-202ENST00000635857 ELL2O00472 640 aaPredicted RBP21.99■■□□□ 1.11
LIN28B-202ENST00000635857 NBPF5PQ86XG9 351 aaPredicted RBP21.99■■□□□ 1.11
LIN28B-202ENST00000635857 CHPF2Q9P2E5 772 aa21.99■■□□□ 1.11
LIN28B-202ENST00000635857 ANXA1P04083 346 aa21.98■■□□□ 1.11
LIN28B-202ENST00000635857 AIMP1Q12904 312 aaKnown RBP21.98■■□□□ 1.11
LIN28B-202ENST00000635857 TTLL7Q6ZT98 887 aa21.98■■□□□ 1.11
LIN28B-202ENST00000635857 A0A0G2JLW4 131 aa21.97■■□□□ 1.11
LIN28B-202ENST00000635857 GTF2E1P29083 439 aaPredicted RBP21.97■■□□□ 1.11
LIN28B-202ENST00000635857 PDIA6Q15084 440 aa21.97■■□□□ 1.11
LIN28B-202ENST00000635857 PROSER3Q2NL68 480 aa21.97■■□□□ 1.11
LIN28B-202ENST00000635857 MYH16Q9H6N6 1097 aa21.97■■□□□ 1.11
LIN28B-202ENST00000635857 HYPKQ9NX55 129 aa21.97■■□□□ 1.11
LIN28B-202ENST00000635857 WWC3Q9ULE0 1092 aa21.97■■□□□ 1.11
LIN28B-202ENST00000635857 KIAA1551Q9HCM1 1747 aa21.97■■□□□ 1.11
LIN28B-202ENST00000635857 DPEP1P16444 411 aa21.96■■□□□ 1.11
LIN28B-202ENST00000635857 HLFQ16534 295 aa21.96■■□□□ 1.11
LIN28B-202ENST00000635857 CCDC30Q5VVM6 783 aa21.96■■□□□ 1.11
LIN28B-202ENST00000635857 COPS6Q7L5N1 327 aa21.96■■□□□ 1.11
LIN28B-202ENST00000635857 XAGE3Q8WTP9 111 aa21.96■■□□□ 1.11
LIN28B-202ENST00000635857 ATP10DQ9P241 1426 aa21.96■■□□□ 1.11
LIN28B-202ENST00000635857 GOLGA2Q08379 1002 aa21.95■■□□□ 1.1
LIN28B-202ENST00000635857 HSP90AB3PQ58FF7 597 aa21.95■■□□□ 1.1
LIN28B-202ENST00000635857 PRR5LQ6MZQ0 368 aa21.95■■□□□ 1.1
LIN28B-202ENST00000635857 TPTE2Q6XPS3 522 aa21.95■■□□□ 1.1
LIN28B-202ENST00000635857 GIGYF2Q6Y7W6 1299 aaKnown RBP21.95■■□□□ 1.1
LIN28B-202ENST00000635857 C8orf58Q8NAV2 365 aa21.95■■□□□ 1.1
LIN28B-202ENST00000635857 STK31Q9BXU1 1019 aa21.95■■□□□ 1.1
LIN28B-202ENST00000635857 NYXQ9GZU5 481 aa21.95■■□□□ 1.1
LIN28B-202ENST00000635857 PIM2Q9P1W9 311 aa21.95■■□□□ 1.1
LIN28B-202ENST00000635857 PDZRN3Q9UPQ7 1066 aa21.95■■□□□ 1.1
LIN28B-202ENST00000635857 FANCIQ9NVI1 1328 aa21.95■■□□□ 1.1
LIN28B-202ENST00000635857 FAM177BA6PVY3 158 aa21.94■■□□□ 1.1
LIN28B-202ENST00000635857 PDE6BP35913 854 aa21.94■■□□□ 1.1
LIN28B-202ENST00000635857 TWISTNBQ3B726 338 aaPredicted RBP21.94■■□□□ 1.1
LIN28B-202ENST00000635857 BCS1LQ9Y276 419 aa21.94■■□□□ 1.1
LIN28B-202ENST00000635857 H0YIN7 160 aa21.93■■□□□ 1.1
LIN28B-202ENST00000635857 YBX3P16989 372 aaKnown RBP eCLIP21.93■■□□□ 1.1
LIN28B-202ENST00000635857 CHD4Q14839 1912 aa21.93■■□□□ 1.1
LIN28B-202ENST00000635857 MIER1Q8N108 512 aa21.93■■□□□ 1.1
LIN28B-202ENST00000635857 BRIP1Q9BX63 1249 aa21.93■■□□□ 1.1
LIN28B-202ENST00000635857 GPTP24298 496 aa21.92■■□□□ 1.1
LIN28B-202ENST00000635857 LRP10Q7Z4F1 713 aa21.92■■□□□ 1.1
LIN28B-202ENST00000635857 C2CD5Q86YS7 1000 aa21.92■■□□□ 1.1
LIN28B-202ENST00000635857 BRCA1P38398 1863 aaKnown RBP21.92■■□□□ 1.1
LIN28B-202ENST00000635857 ANKRD36CQ5JPF3 1778 aa21.92■■□□□ 1.1
LIN28B-202ENST00000635857 CHRNA5P30532 468 aa21.91■■□□□ 1.1
LIN28B-202ENST00000635857 PARP10Q53GL7 1025 aa21.91■■□□□ 1.1
LIN28B-202ENST00000635857 DALRD3Q5D0E6 543 aaKnown RBP21.91■■□□□ 1.1
LIN28B-202ENST00000635857 PPP1R42Q7Z4L9 355 aa21.91■■□□□ 1.1
LIN28B-202ENST00000635857 DLEC1Q9Y238 1755 aa21.91■■□□□ 1.1
LIN28B-202ENST00000635857 YY1P25490 414 aa21.9■■□□□ 1.1
LIN28B-202ENST00000635857 CCDC24Q8N4L8 307 aa21.9■■□□□ 1.1
LIN28B-202ENST00000635857 TSPYL6Q8N831 410 aa21.9■■□□□ 1.1
LIN28B-202ENST00000635857 ANKRD31Q8N7Z5 1873 aa21.9■■□□□ 1.1
LIN28B-202ENST00000635857 DDX58O95786 925 aaKnown RBP21.89■■□□□ 1.09
LIN28B-202ENST00000635857 ANKRD13DQ6ZTN6 518 aa21.89■■□□□ 1.09
LIN28B-202ENST00000635857 PLBD2Q8NHP8 589 aa21.89■■□□□ 1.09
LIN28B-202ENST00000635857 IBTKQ9P2D0 1353 aaPredicted RBP21.88■■□□□ 1.09
LIN28B-202ENST00000635857 ARFGEF1Q9Y6D6 1849 aa21.87■■□□□ 1.09
LIN28B-202ENST00000635857 EXOSC9Q06265 439 aaKnown RBP21.87■■□□□ 1.09
LIN28B-202ENST00000635857 RIC3Q7Z5B4 369 aa21.87■■□□□ 1.09
LIN28B-202ENST00000635857 ZNF34Q8IZ26 560 aa21.87■■□□□ 1.09
LIN28B-202ENST00000635857 ZNF622Q969S3 477 aaKnown RBP eCLIP21.87■■□□□ 1.091e-9■■■■□ 24.5
LIN28B-202ENST00000635857 KCNA3P22001 575 aa21.86■■□□□ 1.09
LIN28B-202ENST00000635857 ARFGEF2Q9Y6D5 1785 aa21.86■■□□□ 1.09
LIN28B-202ENST00000635857 UBN2Q6ZU65 1347 aa21.85■■□□□ 1.09
LIN28B-202ENST00000635857 ZNF521Q96K83 1311 aa21.85■■□□□ 1.09
LIN28B-202ENST00000635857 E9PSI1 815 aa21.85■■□□□ 1.09
LIN28B-202ENST00000635857 TCIRG1Q13488 830 aa21.85■■□□□ 1.09
LIN28B-202ENST00000635857 TTLL6Q8N841 843 aa21.85■■□□□ 1.09
LIN28B-202ENST00000635857 UTP14AQ9BVJ6 771 aaKnown RBP21.85■■□□□ 1.09
LIN28B-202ENST00000635857 RNF123Q5XPI4 1314 aa21.84■■□□□ 1.09
LIN28B-202ENST00000635857 COL11A2P13942 1736 aaPredicted RBP21.84■■□□□ 1.09
LIN28B-202ENST00000635857 NUTM1Q86Y26 1132 aa21.84■■□□□ 1.09
LIN28B-202ENST00000635857 PHAXQ9H814 394 aaKnown RBP21.84■■□□□ 1.09
LIN28B-202ENST00000635857 SUSD4Q5VX71 490 aa21.83■■□□□ 1.09
LIN28B-202ENST00000635857 MASTLQ96GX5 879 aa21.83■■□□□ 1.09
LIN28B-202ENST00000635857 SPINK5Q9NQ38 1064 aaPredicted RBP21.83■■□□□ 1.09
LIN28B-202ENST00000635857 CACNA1FO60840 1977 aa21.83■■□□□ 1.08
LIN28B-202ENST00000635857 TCERG1O14776 1098 aaKnown RBP21.82■■□□□ 1.08
LIN28B-202ENST00000635857 SLC4A2P04920 1241 aa21.82■■□□□ 1.08
LIN28B-202ENST00000635857 ERFEQ4G0M1 354 aa21.82■■□□□ 1.08
LIN28B-202ENST00000635857 ARHGAP27Q6ZUM4 889 aa21.82■■□□□ 1.08
LIN28B-202ENST00000635857 CNKSR1Q969H4 720 aa21.82■■□□□ 1.08
LIN28B-202ENST00000635857 CACNA1SQ13698 1873 aa21.81■■□□□ 1.08
LIN28B-202ENST00000635857 GOLGB1Q14789 3259 aaKnown RBP21.81■■□□□ 1.08
LIN28B-202ENST00000635857 NTSR2O95665 410 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms